RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
SMPDL3B-206ENST00000549094 CDK11AQ9UQ88 783 aaPredicted RBP19.03■□□□□ 0.64
SMPDL3B-206ENST00000549094 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
SMPDL3B-206ENST00000549094 WDR7Q9Y4E6 1490 aa19■□□□□ 0.63
SMPDL3B-206ENST00000549094 CCER2I3L3R5 266 aa19■□□□□ 0.63
SMPDL3B-206ENST00000549094 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
SMPDL3B-206ENST00000549094 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
SMPDL3B-206ENST00000549094 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
SMPDL3B-206ENST00000549094 PPRC1Q5VV67 1664 aaKnown RBP18.97■□□□□ 0.63
SMPDL3B-206ENST00000549094 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
SMPDL3B-206ENST00000549094 NEFLP07196 543 aa18.96■□□□□ 0.63
SMPDL3B-206ENST00000549094 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
SMPDL3B-206ENST00000549094 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
SMPDL3B-206ENST00000549094 FGD6Q6ZV73 1430 aa18.92■□□□□ 0.62
SMPDL3B-206ENST00000549094 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
SMPDL3B-206ENST00000549094 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
SMPDL3B-206ENST00000549094 ANP32EQ9BTT0 268 aa18.92■□□□□ 0.62
SMPDL3B-206ENST00000549094 KDM6BO15054 1643 aa18.91■□□□□ 0.62
SMPDL3B-206ENST00000549094 ANP32CO43423 234 aa18.91■□□□□ 0.62
SMPDL3B-206ENST00000549094 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
SMPDL3B-206ENST00000549094 PTPN23Q9H3S7 1636 aa18.89■□□□□ 0.62
SMPDL3B-206ENST00000549094 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
SMPDL3B-206ENST00000549094 TONSLQ96HA7 1378 aa18.88■□□□□ 0.61
SMPDL3B-206ENST00000549094 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
SMPDL3B-206ENST00000549094 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
SMPDL3B-206ENST00000549094 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
SMPDL3B-206ENST00000549094 FKBP8Q14318 412 aa18.85■□□□□ 0.61
SMPDL3B-206ENST00000549094 SUPT6HQ7KZ85 1726 aaKnown RBP18.85■□□□□ 0.61
SMPDL3B-206ENST00000549094 KIF14Q15058 1648 aa18.85■□□□□ 0.61
SMPDL3B-206ENST00000549094 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
SMPDL3B-206ENST00000549094 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
SMPDL3B-206ENST00000549094 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
SMPDL3B-206ENST00000549094 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
SMPDL3B-206ENST00000549094 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
SMPDL3B-206ENST00000549094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMPDL3B-206ENST00000549094 BCANQ96GW7 911 aa18.76■□□□□ 0.59
SMPDL3B-206ENST00000549094 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
SMPDL3B-206ENST00000549094 NAIPQ13075 1403 aa18.74■□□□□ 0.59
SMPDL3B-206ENST00000549094 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
SMPDL3B-206ENST00000549094 GPATCH8Q9UKJ3 1502 aaKnown RBP18.71■□□□□ 0.59
SMPDL3B-206ENST00000549094 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
SMPDL3B-206ENST00000549094 ITSN2Q9NZM3 1697 aa18.7■□□□□ 0.58
SMPDL3B-206ENST00000549094 TCOF1Q13428 1488 aaKnown RBP18.7■□□□□ 0.58
SMPDL3B-206ENST00000549094 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
SMPDL3B-206ENST00000549094 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
SMPDL3B-206ENST00000549094 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3B-206ENST00000549094 PLCH2O75038 1416 aa18.68■□□□□ 0.58
SMPDL3B-206ENST00000549094 PREX2Q70Z35 1606 aa18.68■□□□□ 0.58
SMPDL3B-206ENST00000549094 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
SMPDL3B-206ENST00000549094 PTPRKQ15262 1439 aa18.67■□□□□ 0.58
SMPDL3B-206ENST00000549094 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
SMPDL3B-206ENST00000549094 NEO1Q92859 1461 aa18.67■□□□□ 0.58
SMPDL3B-206ENST00000549094 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
SMPDL3B-206ENST00000549094 CDC42BPBQ9Y5S2 1711 aa18.65■□□□□ 0.58
SMPDL3B-206ENST00000549094 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
SMPDL3B-206ENST00000549094 ARHGAP5Q13017 1502 aa18.65■□□□□ 0.58
SMPDL3B-206ENST00000549094 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
SMPDL3B-206ENST00000549094 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
SMPDL3B-206ENST00000549094 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
SMPDL3B-206ENST00000549094 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
SMPDL3B-206ENST00000549094 FANCAO15360 1455 aa18.6■□□□□ 0.57
SMPDL3B-206ENST00000549094 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
SMPDL3B-206ENST00000549094 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
SMPDL3B-206ENST00000549094 POLR1AO95602 1720 aaPredicted RBP18.59■□□□□ 0.57
SMPDL3B-206ENST00000549094 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3B-206ENST00000549094 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
SMPDL3B-206ENST00000549094 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
SMPDL3B-206ENST00000549094 RICTORQ6R327 1708 aa18.55■□□□□ 0.56
SMPDL3B-206ENST00000549094 PLEKHH2Q8IVE3 1493 aa18.55■□□□□ 0.56
SMPDL3B-206ENST00000549094 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMPDL3B-206ENST00000549094 FRMPD1Q5SYB0 1578 aa18.55■□□□□ 0.56
SMPDL3B-206ENST00000549094 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
SMPDL3B-206ENST00000549094 KIAA1107Q9UPP5 1409 aa18.52■□□□□ 0.56
SMPDL3B-206ENST00000549094 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.55
SMPDL3B-206ENST00000549094 ADGRL1O94910 1474 aa18.52■□□□□ 0.55
SMPDL3B-206ENST00000549094 ABCC1P33527 1531 aa18.51■□□□□ 0.55
SMPDL3B-206ENST00000549094 DENND4BO75064 1496 aaPredicted RBP18.5■□□□□ 0.55
SMPDL3B-206ENST00000549094 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
SMPDL3B-206ENST00000549094 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMPDL3B-206ENST00000549094 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
SMPDL3B-206ENST00000549094 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
SMPDL3B-206ENST00000549094 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
SMPDL3B-206ENST00000549094 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
SMPDL3B-206ENST00000549094 ZMYM4Q5VZL5 1548 aa18.49■□□□□ 0.55
SMPDL3B-206ENST00000549094 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
SMPDL3B-206ENST00000549094 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
SMPDL3B-206ENST00000549094 ARHGEF12Q9NZN5 1544 aa18.47■□□□□ 0.55
SMPDL3B-206ENST00000549094 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
SMPDL3B-206ENST00000549094 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
SMPDL3B-206ENST00000549094 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
SMPDL3B-206ENST00000549094 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
SMPDL3B-206ENST00000549094 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
SMPDL3B-206ENST00000549094 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
SMPDL3B-206ENST00000549094 RPRD2Q5VT52 1461 aaKnown RBP18.44■□□□□ 0.54
SMPDL3B-206ENST00000549094 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
SMPDL3B-206ENST00000549094 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
SMPDL3B-206ENST00000549094 DAPK1P53355 1430 aa18.44■□□□□ 0.54
SMPDL3B-206ENST00000549094 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
SMPDL3B-206ENST00000549094 ABCC5O15440 1437 aa18.43■□□□□ 0.54
SMPDL3B-206ENST00000549094 POGZQ7Z3K3 1410 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms