RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-206ENST00000549021 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
TGFBR1-206ENST00000549021 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
TGFBR1-206ENST00000549021 MFRPQ9BY79 579 aa11.14□□□□□ -0.63
TGFBR1-206ENST00000549021 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
TGFBR1-206ENST00000549021 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
TGFBR1-206ENST00000549021 OCEL1Q9H607 264 aa11.12□□□□□ -0.63
TGFBR1-206ENST00000549021 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
TGFBR1-206ENST00000549021 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
TGFBR1-206ENST00000549021 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
TGFBR1-206ENST00000549021 NLRP6P59044 892 aa11.09□□□□□ -0.63
TGFBR1-206ENST00000549021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
TGFBR1-206ENST00000549021 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
TGFBR1-206ENST00000549021 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
TGFBR1-206ENST00000549021 KDM2AQ9Y2K7 1162 aa11.07□□□□□ -0.64
TGFBR1-206ENST00000549021 SEC24BO95487 1268 aa11.04□□□□□ -0.64
TGFBR1-206ENST00000549021 PLCG2P16885 1265 aa11.04□□□□□ -0.64
TGFBR1-206ENST00000549021 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
TGFBR1-206ENST00000549021 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
TGFBR1-206ENST00000549021 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
TGFBR1-206ENST00000549021 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
TGFBR1-206ENST00000549021 POTEJP0CG39 1038 aa11□□□□□ -0.65
TGFBR1-206ENST00000549021 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
TGFBR1-206ENST00000549021 CFTRP13569 1480 aa10.98□□□□□ -0.65
TGFBR1-206ENST00000549021 PPP1R37O75864 691 aa10.97□□□□□ -0.65
TGFBR1-206ENST00000549021 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
TGFBR1-206ENST00000549021 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
TGFBR1-206ENST00000549021 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
TGFBR1-206ENST00000549021 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
TGFBR1-206ENST00000549021 LHX8Q68G74 356 aa10.92□□□□□ -0.66
TGFBR1-206ENST00000549021 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.66
TGFBR1-206ENST00000549021 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
TGFBR1-206ENST00000549021 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
TGFBR1-206ENST00000549021 WRNQ14191 1432 aaPredicted RBP eCLIP10.89□□□□□ -0.67
TGFBR1-206ENST00000549021 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
TGFBR1-206ENST00000549021 TOP2BQ02880 1626 aa10.87□□□□□ -0.67
TGFBR1-206ENST00000549021 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
TGFBR1-206ENST00000549021 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
TGFBR1-206ENST00000549021 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
TGFBR1-206ENST00000549021 NESP48681 1621 aa10.84□□□□□ -0.67
TGFBR1-206ENST00000549021 NBR1Q14596 966 aa10.84□□□□□ -0.67
TGFBR1-206ENST00000549021 TPRNQ4KMQ1 711 aa10.82□□□□□ -0.68
TGFBR1-206ENST00000549021 CUX1P39880 1505 aa10.81□□□□□ -0.68
TGFBR1-206ENST00000549021 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
TGFBR1-206ENST00000549021 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
TGFBR1-206ENST00000549021 G3V3G9 751 aa10.8□□□□□ -0.68
TGFBR1-206ENST00000549021 KIF3CO14782 793 aa10.8□□□□□ -0.68
TGFBR1-206ENST00000549021 TMEM92Q6UXU6 159 aa10.8□□□□□ -0.68
TGFBR1-206ENST00000549021 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
TGFBR1-206ENST00000549021 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
TGFBR1-206ENST00000549021 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
TGFBR1-206ENST00000549021 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
TGFBR1-206ENST00000549021 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
TGFBR1-206ENST00000549021 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
TGFBR1-206ENST00000549021 DNMBPQ6XZF7 1577 aa10.75□□□□□ -0.69
TGFBR1-206ENST00000549021 EEA1Q15075 1411 aa10.75□□□□□ -0.69
TGFBR1-206ENST00000549021 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
TGFBR1-206ENST00000549021 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
TGFBR1-206ENST00000549021 NCKAP5LQ9HCH0 1330 aa10.74□□□□□ -0.69
TGFBR1-206ENST00000549021 SOGA1O94964 1423 aa10.73□□□□□ -0.69
TGFBR1-206ENST00000549021 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
TGFBR1-206ENST00000549021 TOPBP1Q92547 1522 aa10.71□□□□□ -0.69
TGFBR1-206ENST00000549021 PDE4AP27815 886 aa10.7□□□□□ -0.7
TGFBR1-206ENST00000549021 MFSD10Q14728 455 aa10.7□□□□□ -0.7
TGFBR1-206ENST00000549021 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
TGFBR1-206ENST00000549021 SLAIN1Q8ND83 568 aa10.7□□□□□ -0.7
TGFBR1-206ENST00000549021 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
TGFBR1-206ENST00000549021 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
TGFBR1-206ENST00000549021 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
TGFBR1-206ENST00000549021 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
TGFBR1-206ENST00000549021 FOXK1P85037 733 aa10.68□□□□□ -0.7
TGFBR1-206ENST00000549021 WDR97A6NE52 1622 aa10.66□□□□□ -0.7
TGFBR1-206ENST00000549021 TMC2Q8TDI7 906 aa10.66□□□□□ -0.7
TGFBR1-206ENST00000549021 KIF21BO75037 1637 aa10.65□□□□□ -0.7
TGFBR1-206ENST00000549021 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
TGFBR1-206ENST00000549021 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
TGFBR1-206ENST00000549021 DSG2Q14126 1118 aa10.63□□□□□ -0.71
TGFBR1-206ENST00000549021 KIF27Q86VH2 1401 aa10.62□□□□□ -0.71
TGFBR1-206ENST00000549021 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
TGFBR1-206ENST00000549021 WDR62O43379 1518 aa10.61□□□□□ -0.71
TGFBR1-206ENST00000549021 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 SLC34A2O95436 690 aa10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
TGFBR1-206ENST00000549021 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
TGFBR1-206ENST00000549021 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
TGFBR1-206ENST00000549021 CUX2O14529 1486 aa10.59□□□□□ -0.71
TGFBR1-206ENST00000549021 RAD54L2Q9Y4B4 1467 aa10.59□□□□□ -0.71
TGFBR1-206ENST00000549021 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
TGFBR1-206ENST00000549021 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
TGFBR1-206ENST00000549021 PLPP6Q8IY26 295 aa10.58□□□□□ -0.72
TGFBR1-206ENST00000549021 GOLGA3Q08378 1498 aa10.57□□□□□ -0.72
TGFBR1-206ENST00000549021 SNPHO15079 494 aa10.57□□□□□ -0.72
TGFBR1-206ENST00000549021 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
TGFBR1-206ENST00000549021 ABCA5Q8WWZ7 1642 aa10.56□□□□□ -0.72
TGFBR1-206ENST00000549021 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
TGFBR1-206ENST00000549021 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms