RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 ARHGEF1Q92888 912 aaKnown RBP2.56□□□□□ -2
LGR5-205ENST00000549015 PCGF6Q9BYE7 350 aa2.56□□□□□ -2
LGR5-205ENST00000549015 SLC24A3Q9HC58 644 aa2.56□□□□□ -2
LGR5-205ENST00000549015 CREBZFQ9NS37 354 aa2.56□□□□□ -2
LGR5-205ENST00000549015 PDS5BQ9NTI5 1447 aa2.56□□□□□ -2
LGR5-205ENST00000549015 FGD5Q6ZNL6 1462 aa2.56□□□□□ -2
LGR5-205ENST00000549015 RAPGEF2Q9Y4G8 1499 aa2.56□□□□□ -2
LGR5-205ENST00000549015 SEMA3EO15041 775 aa2.55□□□□□ -2
LGR5-205ENST00000549015 MNX1P50219 401 aaPredicted RBP2.55□□□□□ -2
LGR5-205ENST00000549015 PDAP1Q13442 181 aaKnown RBP2.55□□□□□ -2
LGR5-205ENST00000549015 POTEHQ6S545 545 aa2.55□□□□□ -2
LGR5-205ENST00000549015 ZNF467Q7Z7K2 595 aaPredicted RBP2.55□□□□□ -2
LGR5-205ENST00000549015 RUSC2Q8N2Y8 1516 aa2.55□□□□□ -2
LGR5-205ENST00000549015 TOPBP1Q92547 1522 aa2.55□□□□□ -2
LGR5-205ENST00000549015 ABCA5Q8WWZ7 1642 aa2.54□□□□□ -2
LGR5-205ENST00000549015 THOC2Q8NI27 1593 aaKnown RBP2.54□□□□□ -2
LGR5-205ENST00000549015 CUX2O14529 1486 aa2.54□□□□□ -2
LGR5-205ENST00000549015 AQRO60306 1485 aaKnown RBP eCLIP2.54□□□□□ -2
LGR5-205ENST00000549015 POLA1P09884 1462 aaPredicted RBP2.54□□□□□ -2
LGR5-205ENST00000549015 FHAD1B1AJZ9 1412 aa2.54□□□□□ -2
LGR5-205ENST00000549015 E2F4Q16254 413 aa2.54□□□□□ -2
LGR5-205ENST00000549015 SMYD5Q6GMV2 418 aa2.54□□□□□ -2
LGR5-205ENST00000549015 FAM9AQ8IZU1 332 aaPredicted RBP2.54□□□□□ -2
LGR5-205ENST00000549015 TSPYL2Q9H2G4 693 aaPredicted RBP2.54□□□□□ -2
LGR5-205ENST00000549015 KIF21AQ7Z4S6 1674 aa2.53□□□□□ -2
LGR5-205ENST00000549015 ARAP1Q96P48 1450 aa2.53□□□□□ -2
LGR5-205ENST00000549015 CLSPNQ9HAW4 1339 aa2.53□□□□□ -2
LGR5-205ENST00000549015 UBTFP17480 764 aaKnown RBP2.53□□□□□ -2
LGR5-205ENST00000549015 CACNB1Q02641 598 aaPredicted RBP2.53□□□□□ -2
LGR5-205ENST00000549015 AKT1S1Q96B36 256 aa2.53□□□□□ -2
LGR5-205ENST00000549015 RBM42Q9BTD8 480 aaKnown RBP2.53□□□□□ -2
LGR5-205ENST00000549015 PODXL2Q9NZ53 605 aa2.53□□□□□ -2
LGR5-205ENST00000549015 PCDHB8Q9UN66 801 aa2.53□□□□□ -2
LGR5-205ENST00000549015 PCDHB13Q9Y5F0 798 aa2.53□□□□□ -2
LGR5-205ENST00000549015 FYCO1Q9BQS8 1478 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 ARHGAP35Q9NRY4 1499 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 MRC2Q9UBG0 1479 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 RRBP1Q9P2E9 1410 aaKnown RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 IGF1RP08069 1367 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 CARMIL1Q5VZK9 1371 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 TESPA1A2RU30 521 aaPredicted RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 RANGAP1P46060 587 aaPredicted RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 PSEN1P49768 467 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 REM2Q8IYK8 340 aaPredicted RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 KRI1Q8N9T8 703 aaKnown RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 MFRPQ9BY79 579 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 CFAP43Q8NDM7 1665 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 WDR62O43379 1518 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 URB2Q14146 1524 aaKnown RBP2.52□□□□□ -2.01
LGR5-205ENST00000549015 IFT140Q96RY7 1462 aa2.52□□□□□ -2.01
LGR5-205ENST00000549015 FMN1Q68DA7 1419 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.51□□□□□ -2.01
LGR5-205ENST00000549015 ZMYND10O75800 440 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 PPP1R37O75864 691 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 NLRP6P59044 892 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 IL27Q8NEV9 243 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 LARP6Q9BRS8 491 aaKnown RBP2.51□□□□□ -2.01
LGR5-205ENST00000549015 TIAM1Q13009 1591 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 SAMD9Q5K651 1589 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 CASKIN1Q8WXD9 1431 aa2.51□□□□□ -2.01
LGR5-205ENST00000549015 CTTNBP2Q8WZ74 1663 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 TARBP1Q13395 1621 aaKnown RBP2.5□□□□□ -2.01
LGR5-205ENST00000549015 ADAMTS12P58397 1594 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 AK7Q96M32 723 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 CABP2Q9NPB3 220 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 GAPVD1Q14C86 1478 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 CCDC18Q5T9S5 1454 aa2.5□□□□□ -2.01
LGR5-205ENST00000549015 PCF11O94913 1555 aaKnown RBP2.49□□□□□ -2.01
LGR5-205ENST00000549015 EHBP1L1Q8N3D4 1523 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 PITPNM1O00562 1244 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 SOX12O15370 315 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 BARGINQ6ZT62 677 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 GPIHBP1Q8IV16 184 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 EFCAB3Q8N7B9 438 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 ZNF579Q8NAF0 562 aaKnown RBP2.49□□□□□ -2.01
LGR5-205ENST00000549015 ARID3AQ99856 593 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 ZMYND15Q9H091 742 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 GPBP1L1Q9HC44 474 aaPredicted RBP2.49□□□□□ -2.01
LGR5-205ENST00000549015 PHF8Q9UPP1 1060 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 GRIN2BQ13224 1484 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 SNAPC4Q5SXM2 1469 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 LRRC9Q6ZRR7 1453 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 MAGI1Q96QZ7 1491 aaPredicted RBP2.49□□□□□ -2.01
LGR5-205ENST00000549015 AKNAQ7Z591 1439 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 NESP48681 1621 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 CCNB3Q8WWL7 1395 aa2.49□□□□□ -2.01
LGR5-205ENST00000549015 UGGT2Q9NYU1 1516 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 NCKAP5LQ9HCH0 1330 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 ACIN1Q9UKV3 1341 aaKnown RBP2.48□□□□□ -2.01
LGR5-205ENST00000549015 RAD54L2Q9Y4B4 1467 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 PAK3O75914 559 aaPredicted RBP2.48□□□□□ -2.01
LGR5-205ENST00000549015 PDE4AP27815 886 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 RBM26Q5T8P6 1007 aaKnown RBP2.48□□□□□ -2.01
LGR5-205ENST00000549015 CHADLQ6NUI6 762 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 FBXO22Q8NEZ5 403 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 DDX27Q96GQ7 796 aaKnown RBP2.48□□□□□ -2.01
LGR5-205ENST00000549015 RSPH6AQ9H0K4 717 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 KDM4CQ9H3R0 1056 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 HECW1Q76N89 1606 aa2.48□□□□□ -2.01
LGR5-205ENST00000549015 IQGAP2Q13576 1575 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms