RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
TROAP-208ENST00000548817 MLECQ14165 292 aa14.49□□□□□ -0.09
TROAP-208ENST00000548817 ATP10AO60312 1499 aa14.49□□□□□ -0.09
TROAP-208ENST00000548817 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
TROAP-208ENST00000548817 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
TROAP-208ENST00000548817 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
TROAP-208ENST00000548817 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
TROAP-208ENST00000548817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
TROAP-208ENST00000548817 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
TROAP-208ENST00000548817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.46□□□□□ -0.1
TROAP-208ENST00000548817 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
TROAP-208ENST00000548817 CEBPAP49715 358 aaPredicted RBP14.43□□□□□ -0.1
TROAP-208ENST00000548817 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
TROAP-208ENST00000548817 NCOA1Q15788 1441 aa14.41□□□□□ -0.1
TROAP-208ENST00000548817 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
TROAP-208ENST00000548817 REREQ9P2R6 1566 aa14.4□□□□□ -0.1
TROAP-208ENST00000548817 C3P01024 1663 aa14.39□□□□□ -0.11
TROAP-208ENST00000548817 PLCH2O75038 1416 aa14.38□□□□□ -0.11
TROAP-208ENST00000548817 TRAPPC8Q9Y2L5 1435 aa14.37□□□□□ -0.11
TROAP-208ENST00000548817 MED1Q15648 1581 aaPredicted RBP14.36□□□□□ -0.11
TROAP-208ENST00000548817 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
TROAP-208ENST00000548817 ZNF518AQ6AHZ1 1483 aa14.36□□□□□ -0.11
TROAP-208ENST00000548817 AGLP35573 1532 aa14.35□□□□□ -0.11
TROAP-208ENST00000548817 KDM5CP41229 1560 aa14.34□□□□□ -0.11
TROAP-208ENST00000548817 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
TROAP-208ENST00000548817 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
TROAP-208ENST00000548817 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
TROAP-208ENST00000548817 NPATQ14207 1427 aa14.32□□□□□ -0.12
TROAP-208ENST00000548817 DIP2CQ9Y2E4 1556 aa14.31□□□□□ -0.12
TROAP-208ENST00000548817 CAMSAP1Q5T5Y3 1602 aa14.31□□□□□ -0.12
TROAP-208ENST00000548817 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
TROAP-208ENST00000548817 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
TROAP-208ENST00000548817 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
TROAP-208ENST00000548817 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
TROAP-208ENST00000548817 MROH2AA6NES4 1674 aa14.27□□□□□ -0.12
TROAP-208ENST00000548817 PKD2Q13563 968 aa14.26□□□□□ -0.13
TROAP-208ENST00000548817 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
TROAP-208ENST00000548817 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
TROAP-208ENST00000548817 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
TROAP-208ENST00000548817 HSPA1LP34931 641 aa14.23□□□□□ -0.13
TROAP-208ENST00000548817 CDK13Q14004 1512 aaKnown RBP14.23□□□□□ -0.13
TROAP-208ENST00000548817 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
TROAP-208ENST00000548817 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
TROAP-208ENST00000548817 ARHGAP5Q13017 1502 aa14.21□□□□□ -0.13
TROAP-208ENST00000548817 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
TROAP-208ENST00000548817 KIF14Q15058 1648 aa14.21□□□□□ -0.13
TROAP-208ENST00000548817 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
TROAP-208ENST00000548817 TOM1O60784 492 aa14.2□□□□□ -0.14
TROAP-208ENST00000548817 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
TROAP-208ENST00000548817 CPS1P31327 1500 aa14.2□□□□□ -0.14
TROAP-208ENST00000548817 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
TROAP-208ENST00000548817 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
TROAP-208ENST00000548817 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
TROAP-208ENST00000548817 CDK11AQ9UQ88 783 aaPredicted RBP14.18□□□□□ -0.14
TROAP-208ENST00000548817 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
TROAP-208ENST00000548817 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
TROAP-208ENST00000548817 ZMYM3Q14202 1370 aa14.16□□□□□ -0.14
TROAP-208ENST00000548817 ABCC1P33527 1531 aa14.15□□□□□ -0.14
TROAP-208ENST00000548817 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
TROAP-208ENST00000548817 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
TROAP-208ENST00000548817 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
TROAP-208ENST00000548817 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
TROAP-208ENST00000548817 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
TROAP-208ENST00000548817 CLIP1P30622 1438 aa14.14□□□□□ -0.15
TROAP-208ENST00000548817 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
TROAP-208ENST00000548817 CDC42BPBQ9Y5S2 1711 aa14.12□□□□□ -0.15
TROAP-208ENST00000548817 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
TROAP-208ENST00000548817 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
TROAP-208ENST00000548817 EEA1Q15075 1411 aa14.11□□□□□ -0.15
TROAP-208ENST00000548817 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
TROAP-208ENST00000548817 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
TROAP-208ENST00000548817 A2ML1A8K2U0 1454 aa14.09□□□□□ -0.15
TROAP-208ENST00000548817 CLTCQ00610 1675 aaKnown RBP14.09□□□□□ -0.15
TROAP-208ENST00000548817 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
TROAP-208ENST00000548817 ALKQ9UM73 1620 aa14.07□□□□□ -0.16
TROAP-208ENST00000548817 PLXNC1O60486 1568 aa14.06□□□□□ -0.16
TROAP-208ENST00000548817 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
TROAP-208ENST00000548817 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
TROAP-208ENST00000548817 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
TROAP-208ENST00000548817 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
TROAP-208ENST00000548817 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
TROAP-208ENST00000548817 ATP7AQ04656 1500 aa14□□□□□ -0.17
TROAP-208ENST00000548817 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
TROAP-208ENST00000548817 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
TROAP-208ENST00000548817 SYNMO15061 1565 aa14□□□□□ -0.17
TROAP-208ENST00000548817 MED14O60244 1454 aa13.99□□□□□ -0.17
TROAP-208ENST00000548817 A2MP01023 1474 aa13.99□□□□□ -0.17
TROAP-208ENST00000548817 CDC42BPAQ5VT25 1732 aa13.99□□□□□ -0.17
TROAP-208ENST00000548817 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
TROAP-208ENST00000548817 DEPDC5O75140 1603 aa13.99□□□□□ -0.17
TROAP-208ENST00000548817 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
TROAP-208ENST00000548817 FAM135AQ9P2D6 1515 aa13.97□□□□□ -0.17
TROAP-208ENST00000548817 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
TROAP-208ENST00000548817 LRRIQ1Q96JM4 1722 aa13.97□□□□□ -0.17
TROAP-208ENST00000548817 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
TROAP-208ENST00000548817 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
TROAP-208ENST00000548817 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
TROAP-208ENST00000548817 ADGBQ8N7X0 1667 aa13.95□□□□□ -0.18
TROAP-208ENST00000548817 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
TROAP-208ENST00000548817 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms