RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
C12orf49-204ENST00000548356 PLCH2O75038 1416 aa24.61■■□□□ 1.53
C12orf49-204ENST00000548356 ARHGEF12Q9NZN5 1544 aa24.59■■□□□ 1.53
C12orf49-204ENST00000548356 ATP10AO60312 1499 aa24.58■■□□□ 1.52
C12orf49-204ENST00000548356 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
C12orf49-204ENST00000548356 C9orf84Q5VXU9 1444 aa24.56■■□□□ 1.52
C12orf49-204ENST00000548356 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
C12orf49-204ENST00000548356 EFCAB2Q5VUJ9 269 aa24.51■■□□□ 1.51
C12orf49-204ENST00000548356 DMRT2Q9Y5R5 561 aa24.49■■□□□ 1.51
C12orf49-204ENST00000548356 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
C12orf49-204ENST00000548356 MYO5CQ9NQX4 1742 aa24.46■■□□□ 1.51
C12orf49-204ENST00000548356 ZNF518AQ6AHZ1 1483 aa24.45■■□□□ 1.51
C12orf49-204ENST00000548356 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
C12orf49-204ENST00000548356 FMN1Q68DA7 1419 aa24.43■■□□□ 1.5
C12orf49-204ENST00000548356 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
C12orf49-204ENST00000548356 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
C12orf49-204ENST00000548356 KDM5CP41229 1560 aa24.42■■□□□ 1.5
C12orf49-204ENST00000548356 DISP3Q9P2K9 1392 aa24.4■■□□□ 1.5
C12orf49-204ENST00000548356 SETD1BQ9UPS6 1966 aaKnown RBP24.38■■□□□ 1.49
C12orf49-204ENST00000548356 AFAP1Q8N556 730 aa24.38■■□□□ 1.49
C12orf49-204ENST00000548356 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
C12orf49-204ENST00000548356 KIF14Q15058 1648 aa24.38■■□□□ 1.49
C12orf49-204ENST00000548356 REREQ9P2R6 1566 aa24.37■■□□□ 1.49
C12orf49-204ENST00000548356 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
C12orf49-204ENST00000548356 ARHGAP5Q13017 1502 aa24.36■■□□□ 1.49
C12orf49-204ENST00000548356 PTPRTO14522 1441 aa24.35■■□□□ 1.49
C12orf49-204ENST00000548356 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
C12orf49-204ENST00000548356 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
C12orf49-204ENST00000548356 SOCS7O14512 581 aa24.34■■□□□ 1.49
C12orf49-204ENST00000548356 CLIP1P30622 1438 aa24.33■■□□□ 1.49
C12orf49-204ENST00000548356 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
C12orf49-204ENST00000548356 MYT1LQ9UL68 1186 aa24.32■■□□□ 1.48
C12orf49-204ENST00000548356 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
C12orf49-204ENST00000548356 AGLP35573 1532 aa24.3■■□□□ 1.48
C12orf49-204ENST00000548356 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
C12orf49-204ENST00000548356 C3P01024 1663 aa24.28■■□□□ 1.48
C12orf49-204ENST00000548356 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
C12orf49-204ENST00000548356 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
C12orf49-204ENST00000548356 ESF1Q9H501 851 aaKnown RBP24.26■■□□□ 1.47
C12orf49-204ENST00000548356 IQSEC2Q5JU85 1478 aa24.25■■□□□ 1.47
C12orf49-204ENST00000548356 LTBP4Q8N2S1 1624 aa24.24■■□□□ 1.47
C12orf49-204ENST00000548356 CDC42BPBQ9Y5S2 1711 aa24.24■■□□□ 1.47
C12orf49-204ENST00000548356 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
C12orf49-204ENST00000548356 SPATA31D1Q6ZQQ2 1576 aa24.23■■□□□ 1.47
C12orf49-204ENST00000548356 ABCC1P33527 1531 aa24.22■■□□□ 1.47
C12orf49-204ENST00000548356 NCOA1Q15788 1441 aa24.21■■□□□ 1.47
C12orf49-204ENST00000548356 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
C12orf49-204ENST00000548356 LRRIQ1Q96JM4 1722 aa24.19■■□□□ 1.46
C12orf49-204ENST00000548356 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
C12orf49-204ENST00000548356 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
C12orf49-204ENST00000548356 KIDINS220Q9ULH0 1771 aa24.15■■□□□ 1.46
C12orf49-204ENST00000548356 NPATQ14207 1427 aa24.15■■□□□ 1.46
C12orf49-204ENST00000548356 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
C12orf49-204ENST00000548356 MROH2AA6NES4 1674 aa24.11■■□□□ 1.45
C12orf49-204ENST00000548356 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
C12orf49-204ENST00000548356 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
C12orf49-204ENST00000548356 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
C12orf49-204ENST00000548356 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.44
C12orf49-204ENST00000548356 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
C12orf49-204ENST00000548356 SPAG9O60271 1321 aaKnown RBP24.03■■□□□ 1.44
C12orf49-204ENST00000548356 NCKAP5LQ9HCH0 1330 aa24.03■■□□□ 1.44
C12orf49-204ENST00000548356 PLA2R1Q13018 1463 aa24.02■■□□□ 1.44
C12orf49-204ENST00000548356 PKD2Q13563 968 aa24.01■■□□□ 1.43
C12orf49-204ENST00000548356 ZNF335Q9H4Z2 1342 aaPredicted RBP24.01■■□□□ 1.43
C12orf49-204ENST00000548356 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
C12orf49-204ENST00000548356 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
C12orf49-204ENST00000548356 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
C12orf49-204ENST00000548356 UBAP1LF5GYI3 381 aa23.98■■□□□ 1.43
C12orf49-204ENST00000548356 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
C12orf49-204ENST00000548356 PLXNC1O60486 1568 aa23.98■■□□□ 1.43
C12orf49-204ENST00000548356 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
C12orf49-204ENST00000548356 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
C12orf49-204ENST00000548356 TCOF1Q13428 1488 aaKnown RBP23.97■■□□□ 1.43
C12orf49-204ENST00000548356 MYO3AQ8NEV4 1616 aa23.97■■□□□ 1.43
C12orf49-204ENST00000548356 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
C12orf49-204ENST00000548356 KIAA1107Q9UPP5 1409 aa23.97■■□□□ 1.43
C12orf49-204ENST00000548356 PTPRKQ15262 1439 aa23.96■■□□□ 1.43
C12orf49-204ENST00000548356 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.43
C12orf49-204ENST00000548356 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.43
C12orf49-204ENST00000548356 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.43
C12orf49-204ENST00000548356 A2MP01023 1474 aa23.95■■□□□ 1.42
C12orf49-204ENST00000548356 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
C12orf49-204ENST00000548356 INO80Q9ULG1 1556 aaPredicted RBP23.94■■□□□ 1.42
C12orf49-204ENST00000548356 PPP6R1Q9UPN7 881 aa23.92■■□□□ 1.42
C12orf49-204ENST00000548356 GGT6Q6P531 493 aa23.89■■□□□ 1.41
C12orf49-204ENST00000548356 CFDP1Q9UEE9 299 aaPredicted RBP23.89■■□□□ 1.41
C12orf49-204ENST00000548356 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
C12orf49-204ENST00000548356 CCNB3Q8WWL7 1395 aa23.86■■□□□ 1.41
C12orf49-204ENST00000548356 A2ML1A8K2U0 1454 aa23.85■■□□□ 1.41
C12orf49-204ENST00000548356 ADGBQ8N7X0 1667 aa23.83■■□□□ 1.41
C12orf49-204ENST00000548356 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
C12orf49-204ENST00000548356 CPS1P31327 1500 aa23.79■■□□□ 1.4
C12orf49-204ENST00000548356 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
C12orf49-204ENST00000548356 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
C12orf49-204ENST00000548356 MBD5Q9P267 1494 aa23.76■■□□□ 1.39
C12orf49-204ENST00000548356 TOM1O60784 492 aa23.76■■□□□ 1.39
C12orf49-204ENST00000548356 HSPA1LP34931 641 aa23.76■■□□□ 1.39
C12orf49-204ENST00000548356 DHX29Q7Z478 1369 aaKnown RBP23.75■■□□□ 1.39
C12orf49-204ENST00000548356 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
C12orf49-204ENST00000548356 TNRQ92752 1358 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms