RNA–Protein interactions for RNA: ENST00000548251.5

LETMD1-214, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-214ENST00000548251 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
LETMD1-214ENST00000548251 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
LETMD1-214ENST00000548251 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
LETMD1-214ENST00000548251 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
LETMD1-214ENST00000548251 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
LETMD1-214ENST00000548251 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
LETMD1-214ENST00000548251 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
LETMD1-214ENST00000548251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
LETMD1-214ENST00000548251 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
LETMD1-214ENST00000548251 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
LETMD1-214ENST00000548251 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
LETMD1-214ENST00000548251 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
LETMD1-214ENST00000548251 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
LETMD1-214ENST00000548251 TOM1O60784 492 aa13.14□□□□□ -0.31
LETMD1-214ENST00000548251 SENP3Q9H4L4 574 aaPredicted RBP13.14□□□□□ -0.31
LETMD1-214ENST00000548251 ATP10AO60312 1499 aa13.14□□□□□ -0.31
LETMD1-214ENST00000548251 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
LETMD1-214ENST00000548251 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
LETMD1-214ENST00000548251 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
LETMD1-214ENST00000548251 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
LETMD1-214ENST00000548251 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
LETMD1-214ENST00000548251 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
LETMD1-214ENST00000548251 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
LETMD1-214ENST00000548251 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
LETMD1-214ENST00000548251 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
LETMD1-214ENST00000548251 C3P01024 1663 aa13.06□□□□□ -0.32
LETMD1-214ENST00000548251 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
LETMD1-214ENST00000548251 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
LETMD1-214ENST00000548251 PKD2Q13563 968 aa13.04□□□□□ -0.32
LETMD1-214ENST00000548251 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
LETMD1-214ENST00000548251 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
LETMD1-214ENST00000548251 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
LETMD1-214ENST00000548251 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
LETMD1-214ENST00000548251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13□□□□□ -0.33
LETMD1-214ENST00000548251 ALKQ9UM73 1620 aa12.99□□□□□ -0.33
LETMD1-214ENST00000548251 RANGAP1P46060 587 aaPredicted RBP12.99□□□□□ -0.33
LETMD1-214ENST00000548251 EEA1Q15075 1411 aa12.98□□□□□ -0.33
LETMD1-214ENST00000548251 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
LETMD1-214ENST00000548251 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
LETMD1-214ENST00000548251 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
LETMD1-214ENST00000548251 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
LETMD1-214ENST00000548251 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
LETMD1-214ENST00000548251 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
LETMD1-214ENST00000548251 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
LETMD1-214ENST00000548251 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
LETMD1-214ENST00000548251 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
LETMD1-214ENST00000548251 PLA2R1Q13018 1463 aa12.93□□□□□ -0.34
LETMD1-214ENST00000548251 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
LETMD1-214ENST00000548251 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
LETMD1-214ENST00000548251 PLCH2O75038 1416 aa12.93□□□□□ -0.34
LETMD1-214ENST00000548251 NPATQ14207 1427 aa12.92□□□□□ -0.34
LETMD1-214ENST00000548251 CPS1P31327 1500 aa12.91□□□□□ -0.34
LETMD1-214ENST00000548251 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
LETMD1-214ENST00000548251 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
LETMD1-214ENST00000548251 AGLP35573 1532 aa12.88□□□□□ -0.35
LETMD1-214ENST00000548251 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
LETMD1-214ENST00000548251 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
LETMD1-214ENST00000548251 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
LETMD1-214ENST00000548251 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
LETMD1-214ENST00000548251 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
LETMD1-214ENST00000548251 ARHGAP35Q9NRY4 1499 aa12.84□□□□□ -0.35
LETMD1-214ENST00000548251 SUPT6HQ7KZ85 1726 aaKnown RBP12.83□□□□□ -0.36
LETMD1-214ENST00000548251 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-214ENST00000548251 KDM5CP41229 1560 aa12.82□□□□□ -0.36
LETMD1-214ENST00000548251 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
LETMD1-214ENST00000548251 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
LETMD1-214ENST00000548251 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
LETMD1-214ENST00000548251 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-214ENST00000548251 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
LETMD1-214ENST00000548251 NEURL4Q96JN8 1562 aa12.79□□□□□ -0.36
LETMD1-214ENST00000548251 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
LETMD1-214ENST00000548251 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
LETMD1-214ENST00000548251 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
LETMD1-214ENST00000548251 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
LETMD1-214ENST00000548251 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
LETMD1-214ENST00000548251 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
LETMD1-214ENST00000548251 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
LETMD1-214ENST00000548251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
LETMD1-214ENST00000548251 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
LETMD1-214ENST00000548251 GGT6Q6P531 493 aa12.74□□□□□ -0.37
LETMD1-214ENST00000548251 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
LETMD1-214ENST00000548251 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-214ENST00000548251 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
LETMD1-214ENST00000548251 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
LETMD1-214ENST00000548251 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.37
LETMD1-214ENST00000548251 MYO5CQ9NQX4 1742 aa12.71□□□□□ -0.37
LETMD1-214ENST00000548251 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
LETMD1-214ENST00000548251 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
LETMD1-214ENST00000548251 FAM135BQ49AJ0 1406 aa12.71□□□□□ -0.38
LETMD1-214ENST00000548251 THEMISQ8N1K5 641 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-214ENST00000548251 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-214ENST00000548251 KIF14Q15058 1648 aa12.69□□□□□ -0.38
LETMD1-214ENST00000548251 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
LETMD1-214ENST00000548251 CLIP1P30622 1438 aa12.68□□□□□ -0.38
LETMD1-214ENST00000548251 MED14O60244 1454 aa12.67□□□□□ -0.38
LETMD1-214ENST00000548251 RXRBP28702 533 aa12.66□□□□□ -0.38
LETMD1-214ENST00000548251 TNRQ92752 1358 aa12.65□□□□□ -0.38
LETMD1-214ENST00000548251 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-214ENST00000548251 CEP162Q5TB80 1403 aa12.63□□□□□ -0.39
LETMD1-214ENST00000548251 ABCC1P33527 1531 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms