RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 ARHGEF12Q9NZN5 1544 aa22.23■■□□□ 1.15
RACGAP1-211ENST00000548247 CDK13Q14004 1512 aaKnown RBP22.22■■□□□ 1.15
RACGAP1-211ENST00000548247 CEBPAP49715 358 aaPredicted RBP22.22■■□□□ 1.15
RACGAP1-211ENST00000548247 ILDR2Q71H61 639 aa22.22■■□□□ 1.15
RACGAP1-211ENST00000548247 PLCH2O75038 1416 aa22.22■■□□□ 1.15
RACGAP1-211ENST00000548247 PREX1Q8TCU6 1659 aa22.21■■□□□ 1.15
RACGAP1-211ENST00000548247 ATP10AO60312 1499 aa22.21■■□□□ 1.15
RACGAP1-211ENST00000548247 DISP3Q9P2K9 1392 aa22.19■■□□□ 1.14
RACGAP1-211ENST00000548247 STRCQ7RTU9 1775 aa22.18■■□□□ 1.14
RACGAP1-211ENST00000548247 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
RACGAP1-211ENST00000548247 EEA1Q15075 1411 aa22.13■■□□□ 1.13
RACGAP1-211ENST00000548247 SOCS7O14512 581 aa22.12■■□□□ 1.13
RACGAP1-211ENST00000548247 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
RACGAP1-211ENST00000548247 DMRT2Q9Y5R5 561 aa22.12■■□□□ 1.13
RACGAP1-211ENST00000548247 MYO5CQ9NQX4 1742 aa22.1■■□□□ 1.13
RACGAP1-211ENST00000548247 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.13
RACGAP1-211ENST00000548247 AFAP1Q8N556 730 aa22.07■■□□□ 1.12
RACGAP1-211ENST00000548247 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
RACGAP1-211ENST00000548247 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
RACGAP1-211ENST00000548247 ZNF518AQ6AHZ1 1483 aa22.06■■□□□ 1.12
RACGAP1-211ENST00000548247 KIF14Q15058 1648 aa22.06■■□□□ 1.12
RACGAP1-211ENST00000548247 KDM5CP41229 1560 aa22.05■■□□□ 1.12
RACGAP1-211ENST00000548247 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
RACGAP1-211ENST00000548247 PTPRTO14522 1441 aa22.02■■□□□ 1.12
RACGAP1-211ENST00000548247 C3P01024 1663 aa22.01■■□□□ 1.11
RACGAP1-211ENST00000548247 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
RACGAP1-211ENST00000548247 SPATA31D1Q6ZQQ2 1576 aa22■■□□□ 1.11
RACGAP1-211ENST00000548247 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
RACGAP1-211ENST00000548247 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
RACGAP1-211ENST00000548247 REREQ9P2R6 1566 aa21.99■■□□□ 1.11
RACGAP1-211ENST00000548247 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
RACGAP1-211ENST00000548247 LTBP4Q8N2S1 1624 aa21.98■■□□□ 1.11
RACGAP1-211ENST00000548247 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
RACGAP1-211ENST00000548247 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
RACGAP1-211ENST00000548247 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
RACGAP1-211ENST00000548247 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
RACGAP1-211ENST00000548247 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.1
RACGAP1-211ENST00000548247 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
RACGAP1-211ENST00000548247 TRAPPC8Q9Y2L5 1435 aa21.93■■□□□ 1.1
RACGAP1-211ENST00000548247 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
RACGAP1-211ENST00000548247 AGLP35573 1532 aa21.92■■□□□ 1.1
RACGAP1-211ENST00000548247 CLIP1P30622 1438 aa21.9■■□□□ 1.1
RACGAP1-211ENST00000548247 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
RACGAP1-211ENST00000548247 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
RACGAP1-211ENST00000548247 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
RACGAP1-211ENST00000548247 IQSEC2Q5JU85 1478 aa21.89■■□□□ 1.09
RACGAP1-211ENST00000548247 ABCC1P33527 1531 aa21.87■■□□□ 1.09
RACGAP1-211ENST00000548247 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
RACGAP1-211ENST00000548247 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
RACGAP1-211ENST00000548247 PREX2Q70Z35 1606 aa21.85■■□□□ 1.09
RACGAP1-211ENST00000548247 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
RACGAP1-211ENST00000548247 CNTLNQ9NXG0 1405 aa21.83■■□□□ 1.09
RACGAP1-211ENST00000548247 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
RACGAP1-211ENST00000548247 NPATQ14207 1427 aa21.79■■□□□ 1.08
RACGAP1-211ENST00000548247 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
RACGAP1-211ENST00000548247 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
RACGAP1-211ENST00000548247 MROH2AA6NES4 1674 aa21.78■■□□□ 1.08
RACGAP1-211ENST00000548247 ZMYM3Q14202 1370 aa21.77■■□□□ 1.08
RACGAP1-211ENST00000548247 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
RACGAP1-211ENST00000548247 SAMD9LQ8IVG5 1584 aa21.76■■□□□ 1.07
RACGAP1-211ENST00000548247 UBAP1LF5GYI3 381 aa21.75■■□□□ 1.07
RACGAP1-211ENST00000548247 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
RACGAP1-211ENST00000548247 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
RACGAP1-211ENST00000548247 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
RACGAP1-211ENST00000548247 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
RACGAP1-211ENST00000548247 CLTCQ00610 1675 aaKnown RBP21.7■■□□□ 1.06
RACGAP1-211ENST00000548247 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.06
RACGAP1-211ENST00000548247 MYO3AQ8NEV4 1616 aa21.69■■□□□ 1.06
RACGAP1-211ENST00000548247 ZNF142P52746 1687 aaPredicted RBP21.69■■□□□ 1.06
RACGAP1-211ENST00000548247 HNRNPMP52272 730 aaKnown RBP eCLIP21.69■■□□□ 1.069e-9■■□□□ 14.1
RACGAP1-211ENST00000548247 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
RACGAP1-211ENST00000548247 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
RACGAP1-211ENST00000548247 TCOF1Q13428 1488 aaKnown RBP21.68■■□□□ 1.06
RACGAP1-211ENST00000548247 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
RACGAP1-211ENST00000548247 PKD2Q13563 968 aa21.67■■□□□ 1.06
RACGAP1-211ENST00000548247 CEP170BQ9Y4F5 1589 aaPredicted RBP21.66■■□□□ 1.06
RACGAP1-211ENST00000548247 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
RACGAP1-211ENST00000548247 ATP7AQ04656 1500 aa21.65■■□□□ 1.06
RACGAP1-211ENST00000548247 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
RACGAP1-211ENST00000548247 A2MP01023 1474 aa21.63■■□□□ 1.05
RACGAP1-211ENST00000548247 INO80Q9ULG1 1556 aaPredicted RBP21.62■■□□□ 1.05
RACGAP1-211ENST00000548247 GGT6Q6P531 493 aa21.62■■□□□ 1.05
RACGAP1-211ENST00000548247 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
RACGAP1-211ENST00000548247 KIAA1107Q9UPP5 1409 aa21.58■■□□□ 1.05
RACGAP1-211ENST00000548247 HSPA1LP34931 641 aa21.58■■□□□ 1.05
RACGAP1-211ENST00000548247 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.04
RACGAP1-211ENST00000548247 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
RACGAP1-211ENST00000548247 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
RACGAP1-211ENST00000548247 A2ML1A8K2U0 1454 aa21.55■■□□□ 1.04
RACGAP1-211ENST00000548247 MED1Q15648 1581 aaPredicted RBP21.55■■□□□ 1.04
RACGAP1-211ENST00000548247 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
RACGAP1-211ENST00000548247 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
RACGAP1-211ENST00000548247 PIP4K2BP78356 416 aa21.54■■□□□ 1.04
RACGAP1-211ENST00000548247 ADGBQ8N7X0 1667 aa21.52■■□□□ 1.04
RACGAP1-211ENST00000548247 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
RACGAP1-211ENST00000548247 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
RACGAP1-211ENST00000548247 TOM1O60784 492 aa21.49■■□□□ 1.03
RACGAP1-211ENST00000548247 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
RACGAP1-211ENST00000548247 POLR1AO95602 1720 aaPredicted RBP21.49■■□□□ 1.03
RACGAP1-211ENST00000548247 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms