RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
RNF41-204ENST00000548120 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
RNF41-204ENST00000548120 SIGLEC1Q9BZZ2 1709 aa11.5□□□□□ -0.57
RNF41-204ENST00000548120 ATP10BO94823 1461 aa11.5□□□□□ -0.57
RNF41-204ENST00000548120 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
RNF41-204ENST00000548120 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
RNF41-204ENST00000548120 UHRF1BP1Q6BDS2 1440 aa11.49□□□□□ -0.57
RNF41-204ENST00000548120 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
RNF41-204ENST00000548120 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
RNF41-204ENST00000548120 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
RNF41-204ENST00000548120 LTBP4Q8N2S1 1624 aa11.48□□□□□ -0.57
RNF41-204ENST00000548120 STRCQ7RTU9 1775 aa11.48□□□□□ -0.57
RNF41-204ENST00000548120 PTPRTO14522 1441 aa11.47□□□□□ -0.57
RNF41-204ENST00000548120 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
RNF41-204ENST00000548120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
RNF41-204ENST00000548120 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
RNF41-204ENST00000548120 RICTORQ6R327 1708 aa11.46□□□□□ -0.58
RNF41-204ENST00000548120 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
RNF41-204ENST00000548120 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
RNF41-204ENST00000548120 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
RNF41-204ENST00000548120 MED1Q15648 1581 aaPredicted RBP11.44□□□□□ -0.58
RNF41-204ENST00000548120 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
RNF41-204ENST00000548120 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
RNF41-204ENST00000548120 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
RNF41-204ENST00000548120 MAGI2Q86UL8 1455 aa11.41□□□□□ -0.58
RNF41-204ENST00000548120 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
RNF41-204ENST00000548120 HECW1Q76N89 1606 aa11.4□□□□□ -0.58
RNF41-204ENST00000548120 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
RNF41-204ENST00000548120 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
RNF41-204ENST00000548120 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
RNF41-204ENST00000548120 NCOA1Q15788 1441 aa11.37□□□□□ -0.59
RNF41-204ENST00000548120 HSPA1LP34931 641 aa11.36□□□□□ -0.59
RNF41-204ENST00000548120 ATP10AO60312 1499 aa11.36□□□□□ -0.59
RNF41-204ENST00000548120 RAPGEF6Q8TEU7 1601 aa11.35□□□□□ -0.59
RNF41-204ENST00000548120 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
RNF41-204ENST00000548120 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
RNF41-204ENST00000548120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.34□□□□□ -0.59
RNF41-204ENST00000548120 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
RNF41-204ENST00000548120 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
RNF41-204ENST00000548120 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
RNF41-204ENST00000548120 TRAPPC8Q9Y2L5 1435 aa11.3□□□□□ -0.6
RNF41-204ENST00000548120 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
RNF41-204ENST00000548120 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
RNF41-204ENST00000548120 C3P01024 1663 aa11.28□□□□□ -0.6
RNF41-204ENST00000548120 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
RNF41-204ENST00000548120 SAMD9Q5K651 1589 aa11.26□□□□□ -0.61
RNF41-204ENST00000548120 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
RNF41-204ENST00000548120 PLCH2O75038 1416 aa11.25□□□□□ -0.61
RNF41-204ENST00000548120 TOM1O60784 492 aa11.24□□□□□ -0.61
RNF41-204ENST00000548120 ZNF518AQ6AHZ1 1483 aa11.24□□□□□ -0.61
RNF41-204ENST00000548120 DIP2CQ9Y2E4 1556 aa11.24□□□□□ -0.61
RNF41-204ENST00000548120 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
RNF41-204ENST00000548120 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
RNF41-204ENST00000548120 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
RNF41-204ENST00000548120 CAPN15O75808 1086 aa11.21□□□□□ -0.61
RNF41-204ENST00000548120 PKD2Q13563 968 aa11.21□□□□□ -0.61
RNF41-204ENST00000548120 KDM5CP41229 1560 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 PLA2R1Q13018 1463 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 SETD1BQ9UPS6 1966 aaKnown RBP11.2□□□□□ -0.62
RNF41-204ENST00000548120 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
RNF41-204ENST00000548120 AGLP35573 1532 aa11.19□□□□□ -0.62
RNF41-204ENST00000548120 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
RNF41-204ENST00000548120 TCOF1Q13428 1488 aaKnown RBP11.19□□□□□ -0.62
RNF41-204ENST00000548120 NPATQ14207 1427 aa11.19□□□□□ -0.62
RNF41-204ENST00000548120 RGS17Q9UGC6 210 aaPredicted RBP11.17□□□□□ -0.62
RNF41-204ENST00000548120 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
RNF41-204ENST00000548120 CPS1P31327 1500 aa11.16□□□□□ -0.62
RNF41-204ENST00000548120 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
RNF41-204ENST00000548120 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
RNF41-204ENST00000548120 DSG3P32926 999 aa11.15□□□□□ -0.62
RNF41-204ENST00000548120 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
RNF41-204ENST00000548120 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
RNF41-204ENST00000548120 ZMYM3Q14202 1370 aa11.15□□□□□ -0.63
RNF41-204ENST00000548120 MLH3Q9UHC1 1453 aa11.14□□□□□ -0.63
RNF41-204ENST00000548120 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
RNF41-204ENST00000548120 MYO5CQ9NQX4 1742 aa11.13□□□□□ -0.63
RNF41-204ENST00000548120 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
RNF41-204ENST00000548120 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
RNF41-204ENST00000548120 MROH2AA6NES4 1674 aa11.11□□□□□ -0.63
RNF41-204ENST00000548120 KIF14Q15058 1648 aa11.1□□□□□ -0.63
RNF41-204ENST00000548120 POTEHQ6S545 545 aa11.1□□□□□ -0.63
RNF41-204ENST00000548120 POTEAQ6S8J7 498 aa11.1□□□□□ -0.63
RNF41-204ENST00000548120 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
RNF41-204ENST00000548120 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
RNF41-204ENST00000548120 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
RNF41-204ENST00000548120 ABCC1P33527 1531 aa11.07□□□□□ -0.64
RNF41-204ENST00000548120 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
RNF41-204ENST00000548120 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
RNF41-204ENST00000548120 VWDEQ8N2E2 1590 aa11.06□□□□□ -0.64
RNF41-204ENST00000548120 SETD1AO15047 1707 aaKnown RBP11.06□□□□□ -0.64
RNF41-204ENST00000548120 DNMT1P26358 1616 aaKnown RBP11.05□□□□□ -0.64
RNF41-204ENST00000548120 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
RNF41-204ENST00000548120 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
RNF41-204ENST00000548120 CLIP1P30622 1438 aa11.03□□□□□ -0.64
RNF41-204ENST00000548120 TROQ12816 1431 aaPredicted RBP11.03□□□□□ -0.64
RNF41-204ENST00000548120 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
RNF41-204ENST00000548120 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms