RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 HECW1Q76N89 1606 aa16■□□□□ 0.15
RACGAP1-209ENST00000547905 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
RACGAP1-209ENST00000547905 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
RACGAP1-209ENST00000547905 REREQ9P2R6 1566 aa16■□□□□ 0.15
RACGAP1-209ENST00000547905 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
RACGAP1-209ENST00000547905 RAPGEF6Q8TEU7 1601 aa15.98■□□□□ 0.15
RACGAP1-209ENST00000547905 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
RACGAP1-209ENST00000547905 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.14
RACGAP1-209ENST00000547905 MLECQ14165 292 aa15.95■□□□□ 0.14
RACGAP1-209ENST00000547905 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
RACGAP1-209ENST00000547905 NPATQ14207 1427 aa15.94■□□□□ 0.14
RACGAP1-209ENST00000547905 AGLP35573 1532 aa15.94■□□□□ 0.14
RACGAP1-209ENST00000547905 PKD2Q13563 968 aa15.94■□□□□ 0.14
RACGAP1-209ENST00000547905 PLA2R1Q13018 1463 aa15.92■□□□□ 0.14
RACGAP1-209ENST00000547905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
RACGAP1-209ENST00000547905 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
RACGAP1-209ENST00000547905 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
RACGAP1-209ENST00000547905 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
RACGAP1-209ENST00000547905 PLCH2O75038 1416 aa15.9■□□□□ 0.14
RACGAP1-209ENST00000547905 C3P01024 1663 aa15.89■□□□□ 0.13
RACGAP1-209ENST00000547905 SAMD9Q5K651 1589 aa15.89■□□□□ 0.13
RACGAP1-209ENST00000547905 TOM1O60784 492 aa15.89■□□□□ 0.13
RACGAP1-209ENST00000547905 NUP153P49790 1475 aaKnown RBP15.88■□□□□ 0.13
RACGAP1-209ENST00000547905 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
RACGAP1-209ENST00000547905 CPS1P31327 1500 aa15.86■□□□□ 0.13
RACGAP1-209ENST00000547905 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
RACGAP1-209ENST00000547905 CAMSAP1Q5T5Y3 1602 aa15.86■□□□□ 0.13
RACGAP1-209ENST00000547905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
RACGAP1-209ENST00000547905 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
RACGAP1-209ENST00000547905 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
RACGAP1-209ENST00000547905 HSPA1LP34931 641 aa15.85■□□□□ 0.13
RACGAP1-209ENST00000547905 KDM5CP41229 1560 aa15.84■□□□□ 0.13
RACGAP1-209ENST00000547905 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
RACGAP1-209ENST00000547905 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.13
RACGAP1-209ENST00000547905 PTPRKQ15262 1439 aa15.82■□□□□ 0.12
RACGAP1-209ENST00000547905 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
RACGAP1-209ENST00000547905 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
RACGAP1-209ENST00000547905 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
RACGAP1-209ENST00000547905 ZNF142P52746 1687 aaPredicted RBP15.81■□□□□ 0.12
RACGAP1-209ENST00000547905 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
RACGAP1-209ENST00000547905 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
RACGAP1-209ENST00000547905 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
RACGAP1-209ENST00000547905 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
RACGAP1-209ENST00000547905 MYO5CQ9NQX4 1742 aa15.72■□□□□ 0.11
RACGAP1-209ENST00000547905 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
RACGAP1-209ENST00000547905 SHANK2Q9UPX8 1470 aa15.69■□□□□ 0.1
RACGAP1-209ENST00000547905 CEP170BQ9Y4F5 1589 aaPredicted RBP15.69■□□□□ 0.1
RACGAP1-209ENST00000547905 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
RACGAP1-209ENST00000547905 ABCA6Q8N139 1617 aa15.68■□□□□ 0.1
RACGAP1-209ENST00000547905 MYO3AQ8NEV4 1616 aa15.67■□□□□ 0.1
RACGAP1-209ENST00000547905 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
RACGAP1-209ENST00000547905 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
RACGAP1-209ENST00000547905 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
RACGAP1-209ENST00000547905 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
RACGAP1-209ENST00000547905 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
RACGAP1-209ENST00000547905 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
RACGAP1-209ENST00000547905 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
RACGAP1-209ENST00000547905 ALKQ9UM73 1620 aa15.6■□□□□ 0.09
RACGAP1-209ENST00000547905 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
RACGAP1-209ENST00000547905 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
RACGAP1-209ENST00000547905 KIF14Q15058 1648 aa15.59■□□□□ 0.09
RACGAP1-209ENST00000547905 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
RACGAP1-209ENST00000547905 VWDEQ8N2E2 1590 aa15.57■□□□□ 0.08
RACGAP1-209ENST00000547905 CLIP1P30622 1438 aa15.57■□□□□ 0.08
RACGAP1-209ENST00000547905 MED14O60244 1454 aa15.57■□□□□ 0.08
RACGAP1-209ENST00000547905 SYNMO15061 1565 aa15.57■□□□□ 0.08
RACGAP1-209ENST00000547905 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
RACGAP1-209ENST00000547905 ABCC1P33527 1531 aa15.56■□□□□ 0.08
RACGAP1-209ENST00000547905 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
RACGAP1-209ENST00000547905 DNMT1P26358 1616 aaKnown RBP15.56■□□□□ 0.08
RACGAP1-209ENST00000547905 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
RACGAP1-209ENST00000547905 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
RACGAP1-209ENST00000547905 DEPDC5O75140 1603 aa15.55■□□□□ 0.08
RACGAP1-209ENST00000547905 NEURL4Q96JN8 1562 aa15.55■□□□□ 0.08
RACGAP1-209ENST00000547905 ITSN2Q9NZM3 1697 aa15.54■□□□□ 0.08
RACGAP1-209ENST00000547905 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
RACGAP1-209ENST00000547905 ANKLE2Q86XL3 938 aa15.52■□□□□ 0.07
RACGAP1-209ENST00000547905 CLTCQ00610 1675 aaKnown RBP15.5■□□□□ 0.07
RACGAP1-209ENST00000547905 PLXNC1O60486 1568 aa15.49■□□□□ 0.07
RACGAP1-209ENST00000547905 FMN1Q68DA7 1419 aa15.49■□□□□ 0.07
RACGAP1-209ENST00000547905 FAM135BQ49AJ0 1406 aa15.48■□□□□ 0.07
RACGAP1-209ENST00000547905 PREX2Q70Z35 1606 aa15.48■□□□□ 0.07
RACGAP1-209ENST00000547905 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
RACGAP1-209ENST00000547905 POTEAQ6S8J7 498 aa15.48■□□□□ 0.07
RACGAP1-209ENST00000547905 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
RACGAP1-209ENST00000547905 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
RACGAP1-209ENST00000547905 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.07
RACGAP1-209ENST00000547905 NLRP1Q9C000 1473 aa15.46■□□□□ 0.07
RACGAP1-209ENST00000547905 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
RACGAP1-209ENST00000547905 SAMD9LQ8IVG5 1584 aa15.46■□□□□ 0.06
RACGAP1-209ENST00000547905 EEA1Q15075 1411 aa15.45■□□□□ 0.06
RACGAP1-209ENST00000547905 A2MP01023 1474 aa15.44■□□□□ 0.06
RACGAP1-209ENST00000547905 TNRQ92752 1358 aa15.44■□□□□ 0.06
RACGAP1-209ENST00000547905 PLEKHH2Q8IVE3 1493 aa15.43■□□□□ 0.06
RACGAP1-209ENST00000547905 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
RACGAP1-209ENST00000547905 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
RACGAP1-209ENST00000547905 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
RACGAP1-209ENST00000547905 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
RACGAP1-209ENST00000547905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.4■□□□□ 0.06
RACGAP1-209ENST00000547905 IQGAP1P46940 1657 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms