RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
CDK4-205ENST00000547853 C3P01024 1663 aa15.94■□□□□ 0.14
CDK4-205ENST00000547853 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
CDK4-205ENST00000547853 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
CDK4-205ENST00000547853 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
CDK4-205ENST00000547853 UHRF1BP1Q6BDS2 1440 aa15.9■□□□□ 0.14
CDK4-205ENST00000547853 KDM5CP41229 1560 aa15.9■□□□□ 0.14
CDK4-205ENST00000547853 REREQ9P2R6 1566 aa15.89■□□□□ 0.13
CDK4-205ENST00000547853 ATP10AO60312 1499 aa15.89■□□□□ 0.13
CDK4-205ENST00000547853 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
CDK4-205ENST00000547853 DIP2CQ9Y2E4 1556 aa15.88■□□□□ 0.13
CDK4-205ENST00000547853 PTPRTO14522 1441 aa15.88■□□□□ 0.13
CDK4-205ENST00000547853 MLECQ14165 292 aa15.88■□□□□ 0.13
CDK4-205ENST00000547853 ABCA6Q8N139 1617 aa15.87■□□□□ 0.13
CDK4-205ENST00000547853 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
CDK4-205ENST00000547853 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
CDK4-205ENST00000547853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
CDK4-205ENST00000547853 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
CDK4-205ENST00000547853 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
CDK4-205ENST00000547853 KIF14Q15058 1648 aa15.84■□□□□ 0.13
CDK4-205ENST00000547853 PLCH2O75038 1416 aa15.84■□□□□ 0.13
CDK4-205ENST00000547853 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
CDK4-205ENST00000547853 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
CDK4-205ENST00000547853 CEBPAP49715 358 aaPredicted RBP15.81■□□□□ 0.12
CDK4-205ENST00000547853 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
CDK4-205ENST00000547853 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
CDK4-205ENST00000547853 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
CDK4-205ENST00000547853 ZNF142P52746 1687 aaPredicted RBP15.79■□□□□ 0.12
CDK4-205ENST00000547853 AGLP35573 1532 aa15.78■□□□□ 0.12
CDK4-205ENST00000547853 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.11
CDK4-205ENST00000547853 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.11
CDK4-205ENST00000547853 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
CDK4-205ENST00000547853 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
CDK4-205ENST00000547853 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
CDK4-205ENST00000547853 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
CDK4-205ENST00000547853 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
CDK4-205ENST00000547853 PREX2Q70Z35 1606 aa15.74■□□□□ 0.11
CDK4-205ENST00000547853 MED1Q15648 1581 aaPredicted RBP15.74■□□□□ 0.11
CDK4-205ENST00000547853 ABCC1P33527 1531 aa15.73■□□□□ 0.11
CDK4-205ENST00000547853 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
CDK4-205ENST00000547853 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
CDK4-205ENST00000547853 MLH3Q9UHC1 1453 aa15.71■□□□□ 0.11
CDK4-205ENST00000547853 HRCP23327 699 aa15.68■□□□□ 0.1
CDK4-205ENST00000547853 CNTLNQ9NXG0 1405 aa15.68■□□□□ 0.1
CDK4-205ENST00000547853 NPATQ14207 1427 aa15.67■□□□□ 0.1
CDK4-205ENST00000547853 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
CDK4-205ENST00000547853 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
CDK4-205ENST00000547853 EFCAB2Q5VUJ9 269 aa15.66■□□□□ 0.1
CDK4-205ENST00000547853 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
CDK4-205ENST00000547853 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
CDK4-205ENST00000547853 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
CDK4-205ENST00000547853 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
CDK4-205ENST00000547853 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
CDK4-205ENST00000547853 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
CDK4-205ENST00000547853 POLR1AO95602 1720 aaPredicted RBP15.64■□□□□ 0.09
CDK4-205ENST00000547853 EEA1Q15075 1411 aa15.64■□□□□ 0.09
CDK4-205ENST00000547853 AFAP1Q8N556 730 aa15.63■□□□□ 0.09
CDK4-205ENST00000547853 ZNF335Q9H4Z2 1342 aaPredicted RBP15.63■□□□□ 0.09
CDK4-205ENST00000547853 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
CDK4-205ENST00000547853 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
CDK4-205ENST00000547853 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
CDK4-205ENST00000547853 INO80Q9ULG1 1556 aaPredicted RBP15.59■□□□□ 0.09
CDK4-205ENST00000547853 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
CDK4-205ENST00000547853 CLIP1P30622 1438 aa15.59■□□□□ 0.09
CDK4-205ENST00000547853 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.08
CDK4-205ENST00000547853 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
CDK4-205ENST00000547853 ALKQ9UM73 1620 aa15.57■□□□□ 0.08
CDK4-205ENST00000547853 SYCP2Q9BX26 1530 aa15.55■□□□□ 0.08
CDK4-205ENST00000547853 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
CDK4-205ENST00000547853 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
CDK4-205ENST00000547853 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
CDK4-205ENST00000547853 ATP7AQ04656 1500 aa15.53■□□□□ 0.08
CDK4-205ENST00000547853 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
CDK4-205ENST00000547853 CPS1P31327 1500 aa15.53■□□□□ 0.08
CDK4-205ENST00000547853 MYT1LQ9UL68 1186 aa15.52■□□□□ 0.08
CDK4-205ENST00000547853 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
CDK4-205ENST00000547853 HSPA1LP34931 641 aa15.5■□□□□ 0.07
CDK4-205ENST00000547853 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
CDK4-205ENST00000547853 ADGBQ8N7X0 1667 aa15.5■□□□□ 0.07
CDK4-205ENST00000547853 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
CDK4-205ENST00000547853 PKD2Q13563 968 aa15.49■□□□□ 0.07
CDK4-205ENST00000547853 A2ML1A8K2U0 1454 aa15.48■□□□□ 0.07
CDK4-205ENST00000547853 CCDC18Q5T9S5 1454 aa15.47■□□□□ 0.07
CDK4-205ENST00000547853 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CDK4-205ENST00000547853 STRCP1A6NGW2 1772 aa15.45■□□□□ 0.06
CDK4-205ENST00000547853 RNF17Q9BXT8 1623 aaKnown RBP15.45■□□□□ 0.06
CDK4-205ENST00000547853 A2MP01023 1474 aa15.45■□□□□ 0.06
CDK4-205ENST00000547853 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
CDK4-205ENST00000547853 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
CDK4-205ENST00000547853 SYNMO15061 1565 aa15.44■□□□□ 0.06
CDK4-205ENST00000547853 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
CDK4-205ENST00000547853 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
CDK4-205ENST00000547853 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
CDK4-205ENST00000547853 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
CDK4-205ENST00000547853 GPATCH8Q9UKJ3 1502 aaKnown RBP15.4■□□□□ 0.06
CDK4-205ENST00000547853 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
CDK4-205ENST00000547853 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
CDK4-205ENST00000547853 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
CDK4-205ENST00000547853 KIAA1107Q9UPP5 1409 aa15.37■□□□□ 0.05
CDK4-205ENST00000547853 TOM1O60784 492 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms