RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
BRF1-212ENST00000547562 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
BRF1-212ENST00000547562 ADCY10Q96PN6 1610 aa22.1■■□□□ 1.13
BRF1-212ENST00000547562 PRG4Q92954 1404 aaPredicted RBP22.1■■□□□ 1.13
BRF1-212ENST00000547562 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
BRF1-212ENST00000547562 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
BRF1-212ENST00000547562 ZNF644Q9H582 1327 aaPredicted RBP22.07■■□□□ 1.12
BRF1-212ENST00000547562 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
BRF1-212ENST00000547562 KIF14Q15058 1648 aa22.05■■□□□ 1.12
BRF1-212ENST00000547562 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
BRF1-212ENST00000547562 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
BRF1-212ENST00000547562 ABCA8O94911 1581 aa22.01■■□□□ 1.11
BRF1-212ENST00000547562 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
BRF1-212ENST00000547562 KCNH8Q96L42 1107 aa22■■□□□ 1.11
BRF1-212ENST00000547562 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
BRF1-212ENST00000547562 CROCC2H7BZ55 1655 aa21.98■■□□□ 1.11
BRF1-212ENST00000547562 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
BRF1-212ENST00000547562 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
BRF1-212ENST00000547562 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
BRF1-212ENST00000547562 FOXD1Q16676 465 aa21.92■■□□□ 1.1
BRF1-212ENST00000547562 ATP10BO94823 1461 aa21.92■■□□□ 1.1
BRF1-212ENST00000547562 ADGRL2O95490 1459 aa21.92■■□□□ 1.1
BRF1-212ENST00000547562 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
BRF1-212ENST00000547562 ANP32CO43423 234 aa21.9■■□□□ 1.1
BRF1-212ENST00000547562 PLEKHD1A6NEE1 506 aa21.9■■□□□ 1.1
BRF1-212ENST00000547562 ABCC10Q5T3U5 1492 aa21.9■■□□□ 1.1
BRF1-212ENST00000547562 CCER2I3L3R5 266 aa21.89■■□□□ 1.1
BRF1-212ENST00000547562 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
BRF1-212ENST00000547562 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
BRF1-212ENST00000547562 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
BRF1-212ENST00000547562 PZPP20742 1482 aa21.87■■□□□ 1.09
BRF1-212ENST00000547562 CHD1O14646 1710 aa21.86■■□□□ 1.09
BRF1-212ENST00000547562 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
BRF1-212ENST00000547562 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
BRF1-212ENST00000547562 ANKRD30AQ9BXX3 1397 aa21.84■■□□□ 1.09
BRF1-212ENST00000547562 PTPRGP23470 1445 aa21.83■■□□□ 1.08
BRF1-212ENST00000547562 SHANK2Q9UPX8 1470 aa21.82■■□□□ 1.08
BRF1-212ENST00000547562 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
BRF1-212ENST00000547562 WASHC2AQ641Q2 1341 aa21.79■■□□□ 1.08
BRF1-212ENST00000547562 ANKRD50Q9ULJ7 1429 aa21.78■■□□□ 1.08
BRF1-212ENST00000547562 SHROOM2Q13796 1616 aa21.77■■□□□ 1.08
BRF1-212ENST00000547562 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
BRF1-212ENST00000547562 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
BRF1-212ENST00000547562 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
BRF1-212ENST00000547562 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
BRF1-212ENST00000547562 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
BRF1-212ENST00000547562 CDC42BPBQ9Y5S2 1711 aa21.73■■□□□ 1.07
BRF1-212ENST00000547562 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
BRF1-212ENST00000547562 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
BRF1-212ENST00000547562 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
BRF1-212ENST00000547562 POLR1AO95602 1720 aaPredicted RBP21.7■■□□□ 1.06
BRF1-212ENST00000547562 PKD2Q13563 968 aa21.69■■□□□ 1.06
BRF1-212ENST00000547562 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
BRF1-212ENST00000547562 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
BRF1-212ENST00000547562 KDM5DQ9BY66 1539 aa21.68■■□□□ 1.06
BRF1-212ENST00000547562 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
BRF1-212ENST00000547562 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
BRF1-212ENST00000547562 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
BRF1-212ENST00000547562 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.062e-17■■■■■ 41.6
BRF1-212ENST00000547562 CCDC141Q6ZP82 1450 aa21.65■■□□□ 1.06
BRF1-212ENST00000547562 NUP155O75694 1391 aa21.65■■□□□ 1.06
BRF1-212ENST00000547562 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
BRF1-212ENST00000547562 C11orf95C9JLR9 678 aaPredicted RBP21.65■■□□□ 1.06
BRF1-212ENST00000547562 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
BRF1-212ENST00000547562 ABCC2Q92887 1545 aa21.62■■□□□ 1.05
BRF1-212ENST00000547562 TTC37Q6PGP7 1564 aa21.62■■□□□ 1.05
BRF1-212ENST00000547562 RSPH4AQ5TD94 716 aa21.6■■□□□ 1.05
BRF1-212ENST00000547562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
BRF1-212ENST00000547562 MYO5CQ9NQX4 1742 aa21.58■■□□□ 1.04
BRF1-212ENST00000547562 SYCP2Q9BX26 1530 aa21.57■■□□□ 1.04
BRF1-212ENST00000547562 ARHGAP5Q13017 1502 aa21.57■■□□□ 1.04
BRF1-212ENST00000547562 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
BRF1-212ENST00000547562 KIF7Q2M1P5 1343 aa21.56■■□□□ 1.04
BRF1-212ENST00000547562 ARHGEF12Q9NZN5 1544 aa21.56■■□□□ 1.04
BRF1-212ENST00000547562 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
BRF1-212ENST00000547562 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
BRF1-212ENST00000547562 KDM5CP41229 1560 aa21.52■■□□□ 1.04
BRF1-212ENST00000547562 FAM135AQ9P2D6 1515 aa21.52■■□□□ 1.04
BRF1-212ENST00000547562 USP47Q96K76 1375 aa21.52■■□□□ 1.04
BRF1-212ENST00000547562 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
BRF1-212ENST00000547562 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
BRF1-212ENST00000547562 RALGAPBQ86X10 1494 aa21.51■■□□□ 1.03
BRF1-212ENST00000547562 BCORL1Q5H9F3 1711 aa21.51■■□□□ 1.03
BRF1-212ENST00000547562 PLEKHH2Q8IVE3 1493 aa21.5■■□□□ 1.03
BRF1-212ENST00000547562 ZCCHC11Q5TAX3 1644 aaKnown RBP21.49■■□□□ 1.03
BRF1-212ENST00000547562 UNC13BO14795 1591 aa21.49■■□□□ 1.03
BRF1-212ENST00000547562 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
BRF1-212ENST00000547562 FKBP8Q14318 412 aa21.48■■□□□ 1.03
BRF1-212ENST00000547562 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
BRF1-212ENST00000547562 UHRF1BP1LA0JNW5 1464 aa21.47■■□□□ 1.03
BRF1-212ENST00000547562 CCDC184Q52MB2 194 aa21.44■■□□□ 1.02
BRF1-212ENST00000547562 NEFLP07196 543 aa21.44■■□□□ 1.02
BRF1-212ENST00000547562 ARID4BQ4LE39 1312 aaPredicted RBP21.43■■□□□ 1.02
BRF1-212ENST00000547562 PLCH2O75038 1416 aa21.42■■□□□ 1.02
BRF1-212ENST00000547562 IQGAP3Q86VI3 1631 aa21.41■■□□□ 1.02
BRF1-212ENST00000547562 DUOX2Q9NRD8 1548 aa21.4■■□□□ 1.02
BRF1-212ENST00000547562 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
BRF1-212ENST00000547562 BCANQ96GW7 911 aa21.39■■□□□ 1.01
BRF1-212ENST00000547562 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.01
BRF1-212ENST00000547562 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms