RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
BRF1-211ENST00000547530 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
BRF1-211ENST00000547530 PDE4AP27815 886 aa20.21■□□□□ 0.83
BRF1-211ENST00000547530 PRKCSHP14314 528 aaPredicted RBP20.21■□□□□ 0.83
BRF1-211ENST00000547530 RCAN3Q9UKA8 241 aa20.2■□□□□ 0.82
BRF1-211ENST00000547530 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
BRF1-211ENST00000547530 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
BRF1-211ENST00000547530 ERICH6BQ5W0A0 696 aa20.17■□□□□ 0.82
BRF1-211ENST00000547530 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
BRF1-211ENST00000547530 NCOA2Q15596 1464 aa20.16■□□□□ 0.82
BRF1-211ENST00000547530 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
BRF1-211ENST00000547530 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
BRF1-211ENST00000547530 HFM1A2PYH4 1435 aa20.13■□□□□ 0.81
BRF1-211ENST00000547530 RRP1P56182 461 aaKnown RBP20.11■□□□□ 0.81
BRF1-211ENST00000547530 CRBNQ96SW2 442 aa20.11■□□□□ 0.81
BRF1-211ENST00000547530 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
BRF1-211ENST00000547530 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
BRF1-211ENST00000547530 USP47Q96K76 1375 aa20.09■□□□□ 0.81
BRF1-211ENST00000547530 SPRYD3Q8NCJ5 442 aa20.08■□□□□ 0.81
BRF1-211ENST00000547530 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
BRF1-211ENST00000547530 NESP48681 1621 aa20.06■□□□□ 0.8
BRF1-211ENST00000547530 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
BRF1-211ENST00000547530 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
BRF1-211ENST00000547530 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
BRF1-211ENST00000547530 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
BRF1-211ENST00000547530 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
BRF1-211ENST00000547530 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
BRF1-211ENST00000547530 NCAPD3P42695 1498 aa20■□□□□ 0.79
BRF1-211ENST00000547530 SLKQ9H2G2 1235 aaPredicted RBP19.99■□□□□ 0.79
BRF1-211ENST00000547530 CANXP27824 592 aaKnown RBP19.99■□□□□ 0.79
BRF1-211ENST00000547530 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
BRF1-211ENST00000547530 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
BRF1-211ENST00000547530 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
BRF1-211ENST00000547530 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
BRF1-211ENST00000547530 NCOA1Q15788 1441 aa19.97■□□□□ 0.79
BRF1-211ENST00000547530 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
BRF1-211ENST00000547530 NUP155O75694 1391 aa19.96■□□□□ 0.79
BRF1-211ENST00000547530 BACH2Q9BYV9 841 aa19.95■□□□□ 0.78
BRF1-211ENST00000547530 HNRNPMP52272 730 aaKnown RBP eCLIP19.95■□□□□ 0.782e-6■■■■■ 28
BRF1-211ENST00000547530 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
BRF1-211ENST00000547530 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
BRF1-211ENST00000547530 NFKBIBQ15653 356 aa19.94■□□□□ 0.78
BRF1-211ENST00000547530 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
BRF1-211ENST00000547530 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
BRF1-211ENST00000547530 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
BRF1-211ENST00000547530 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
BRF1-211ENST00000547530 FRAT2O75474 233 aaPredicted RBP19.92■□□□□ 0.78
BRF1-211ENST00000547530 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
BRF1-211ENST00000547530 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
BRF1-211ENST00000547530 PANK3Q9H999 370 aa19.92■□□□□ 0.78
BRF1-211ENST00000547530 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
BRF1-211ENST00000547530 GZF1Q9H116 711 aaPredicted RBP19.9■□□□□ 0.78
BRF1-211ENST00000547530 ANKRD30BQ9BXX2 1392 aa19.9■□□□□ 0.78
BRF1-211ENST00000547530 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
BRF1-211ENST00000547530 ROCK2O75116 1388 aaKnown RBP19.89■□□□□ 0.77
BRF1-211ENST00000547530 KDM6BO15054 1643 aa19.89■□□□□ 0.77
BRF1-211ENST00000547530 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
BRF1-211ENST00000547530 GSE1Q14687 1217 aa19.88■□□□□ 0.77
BRF1-211ENST00000547530 ADAMTS8Q9UP79 889 aa19.87■□□□□ 0.77
BRF1-211ENST00000547530 NLRP13Q86W25 1043 aa19.86■□□□□ 0.77
BRF1-211ENST00000547530 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
BRF1-211ENST00000547530 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
BRF1-211ENST00000547530 DHX29Q7Z478 1369 aaKnown RBP19.82■□□□□ 0.76
BRF1-211ENST00000547530 KTN1Q86UP2 1357 aaKnown RBP19.82■□□□□ 0.76
BRF1-211ENST00000547530 CLUAP1Q96AJ1 413 aa19.81■□□□□ 0.76
BRF1-211ENST00000547530 DDRGK1Q96HY6 314 aa19.81■□□□□ 0.76
BRF1-211ENST00000547530 KIF15Q9NS87 1388 aa19.81■□□□□ 0.76
BRF1-211ENST00000547530 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
BRF1-211ENST00000547530 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
BRF1-211ENST00000547530 RALBP1Q15311 655 aa19.8■□□□□ 0.76
BRF1-211ENST00000547530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.8■□□□□ 0.763e-6■■■■■ 37.9
BRF1-211ENST00000547530 DENND4BO75064 1496 aaPredicted RBP19.79■□□□□ 0.76
BRF1-211ENST00000547530 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
BRF1-211ENST00000547530 BCAR3O75815 825 aa19.78■□□□□ 0.76
BRF1-211ENST00000547530 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.76
BRF1-211ENST00000547530 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
BRF1-211ENST00000547530 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
BRF1-211ENST00000547530 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
BRF1-211ENST00000547530 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
BRF1-211ENST00000547530 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
BRF1-211ENST00000547530 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
BRF1-211ENST00000547530 APAF1O14727 1248 aa19.74■□□□□ 0.75
BRF1-211ENST00000547530 COG6Q9Y2V7 657 aa19.74■□□□□ 0.75
BRF1-211ENST00000547530 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
BRF1-211ENST00000547530 RPRD2Q5VT52 1461 aaKnown RBP19.71■□□□□ 0.75
BRF1-211ENST00000547530 ABCC5O15440 1437 aa19.71■□□□□ 0.75
BRF1-211ENST00000547530 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
BRF1-211ENST00000547530 POGKQ9P215 609 aa19.7■□□□□ 0.74
BRF1-211ENST00000547530 DAPK1P53355 1430 aa19.7■□□□□ 0.74
BRF1-211ENST00000547530 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
BRF1-211ENST00000547530 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
BRF1-211ENST00000547530 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
BRF1-211ENST00000547530 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
BRF1-211ENST00000547530 GOLGA2Q08379 1002 aa19.67■□□□□ 0.74
BRF1-211ENST00000547530 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
BRF1-211ENST00000547530 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
BRF1-211ENST00000547530 MS4A1P11836 297 aa19.66■□□□□ 0.74
BRF1-211ENST00000547530 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
BRF1-211ENST00000547530 TMF1P82094 1093 aa19.66■□□□□ 0.74
BRF1-211ENST00000547530 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms