RNA–Protein interactions for RNA: ENST00000547476.5

TUBA1B-203, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-203ENST00000547476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.96■□□□□ 0.796e-33■■■□□ 18
TUBA1B-203ENST00000547476 HECW1Q76N89 1606 aa19.95■□□□□ 0.78
TUBA1B-203ENST00000547476 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
TUBA1B-203ENST00000547476 STRCQ7RTU9 1775 aa19.92■□□□□ 0.78
TUBA1B-203ENST00000547476 ARHGEF12Q9NZN5 1544 aa19.92■□□□□ 0.78
TUBA1B-203ENST00000547476 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
TUBA1B-203ENST00000547476 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
TUBA1B-203ENST00000547476 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
TUBA1B-203ENST00000547476 ATP10AO60312 1499 aa19.86■□□□□ 0.77
TUBA1B-203ENST00000547476 C9orf84Q5VXU9 1444 aa19.86■□□□□ 0.77
TUBA1B-203ENST00000547476 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
TUBA1B-203ENST00000547476 PLCH2O75038 1416 aa19.8■□□□□ 0.76
TUBA1B-203ENST00000547476 PTPRTO14522 1441 aa19.79■□□□□ 0.76
TUBA1B-203ENST00000547476 SETD1BQ9UPS6 1966 aaKnown RBP19.79■□□□□ 0.76
TUBA1B-203ENST00000547476 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
TUBA1B-203ENST00000547476 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
TUBA1B-203ENST00000547476 MYO5CQ9NQX4 1742 aa19.76■□□□□ 0.75
TUBA1B-203ENST00000547476 LTBP4Q8N2S1 1624 aa19.76■□□□□ 0.75
TUBA1B-203ENST00000547476 C3P01024 1663 aa19.75■□□□□ 0.75
TUBA1B-203ENST00000547476 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
TUBA1B-203ENST00000547476 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
TUBA1B-203ENST00000547476 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
TUBA1B-203ENST00000547476 MYT1LQ9UL68 1186 aa19.73■□□□□ 0.75
TUBA1B-203ENST00000547476 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
TUBA1B-203ENST00000547476 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
TUBA1B-203ENST00000547476 KDM5CP41229 1560 aa19.69■□□□□ 0.74
TUBA1B-203ENST00000547476 REREQ9P2R6 1566 aa19.67■□□□□ 0.74
TUBA1B-203ENST00000547476 NCOA1Q15788 1441 aa19.67■□□□□ 0.74
TUBA1B-203ENST00000547476 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
TUBA1B-203ENST00000547476 AFAP1Q8N556 730 aa19.66■□□□□ 0.74
TUBA1B-203ENST00000547476 TRAPPC8Q9Y2L5 1435 aa19.66■□□□□ 0.74
TUBA1B-203ENST00000547476 KIF14Q15058 1648 aa19.65■□□□□ 0.74
TUBA1B-203ENST00000547476 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
TUBA1B-203ENST00000547476 ATP1B4Q9UN42 357 aaPredicted RBP19.64■□□□□ 0.73
TUBA1B-203ENST00000547476 CAMSAP1Q5T5Y3 1602 aa19.62■□□□□ 0.73
TUBA1B-203ENST00000547476 UBAP1LF5GYI3 381 aa19.61■□□□□ 0.73
TUBA1B-203ENST00000547476 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
TUBA1B-203ENST00000547476 AGLP35573 1532 aa19.6■□□□□ 0.73
TUBA1B-203ENST00000547476 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
TUBA1B-203ENST00000547476 EEA1Q15075 1411 aa19.59■□□□□ 0.73
TUBA1B-203ENST00000547476 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
TUBA1B-203ENST00000547476 ZNF335Q9H4Z2 1342 aaPredicted RBP19.56■□□□□ 0.72
TUBA1B-203ENST00000547476 CLIP1P30622 1438 aa19.55■□□□□ 0.72
TUBA1B-203ENST00000547476 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
TUBA1B-203ENST00000547476 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
TUBA1B-203ENST00000547476 CDC42BPBQ9Y5S2 1711 aa19.54■□□□□ 0.72
TUBA1B-203ENST00000547476 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
TUBA1B-203ENST00000547476 ITSN2Q9NZM3 1697 aa19.52■□□□□ 0.72
TUBA1B-203ENST00000547476 NCKAP5LQ9HCH0 1330 aa19.52■□□□□ 0.72
TUBA1B-203ENST00000547476 NPATQ14207 1427 aa19.52■□□□□ 0.72
TUBA1B-203ENST00000547476 ABCC1P33527 1531 aa19.51■□□□□ 0.71
TUBA1B-203ENST00000547476 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
TUBA1B-203ENST00000547476 KIDINS220Q9ULH0 1771 aa19.51■□□□□ 0.71
TUBA1B-203ENST00000547476 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
TUBA1B-203ENST00000547476 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
TUBA1B-203ENST00000547476 ZNF142P52746 1687 aaPredicted RBP19.48■□□□□ 0.71
TUBA1B-203ENST00000547476 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
TUBA1B-203ENST00000547476 MYO3AQ8NEV4 1616 aa19.47■□□□□ 0.71
TUBA1B-203ENST00000547476 PKD2Q13563 968 aa19.47■□□□□ 0.71
TUBA1B-203ENST00000547476 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
TUBA1B-203ENST00000547476 LRRIQ1Q96JM4 1722 aa19.46■□□□□ 0.71
TUBA1B-203ENST00000547476 PLA2R1Q13018 1463 aa19.46■□□□□ 0.71
TUBA1B-203ENST00000547476 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
TUBA1B-203ENST00000547476 CLTCQ00610 1675 aaKnown RBP19.44■□□□□ 0.7
TUBA1B-203ENST00000547476 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
TUBA1B-203ENST00000547476 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
TUBA1B-203ENST00000547476 HSPA1LP34931 641 aa19.42■□□□□ 0.7
TUBA1B-203ENST00000547476 PIP4K2BP78356 416 aa19.41■□□□□ 0.7
TUBA1B-203ENST00000547476 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
TUBA1B-203ENST00000547476 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
TUBA1B-203ENST00000547476 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
TUBA1B-203ENST00000547476 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
TUBA1B-203ENST00000547476 CDC42BPAQ5VT25 1732 aa19.39■□□□□ 0.69
TUBA1B-203ENST00000547476 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
TUBA1B-203ENST00000547476 PTPRKQ15262 1439 aa19.36■□□□□ 0.69
TUBA1B-203ENST00000547476 TOM1O60784 492 aa19.36■□□□□ 0.69
TUBA1B-203ENST00000547476 SYCP2Q9BX26 1530 aa19.35■□□□□ 0.69
TUBA1B-203ENST00000547476 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
TUBA1B-203ENST00000547476 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
TUBA1B-203ENST00000547476 CPS1P31327 1500 aa19.33■□□□□ 0.68
TUBA1B-203ENST00000547476 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
TUBA1B-203ENST00000547476 PLXNC1O60486 1568 aa19.32■□□□□ 0.68
TUBA1B-203ENST00000547476 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
TUBA1B-203ENST00000547476 POLR1AO95602 1720 aaPredicted RBP19.32■□□□□ 0.68
TUBA1B-203ENST00000547476 GGT6Q6P531 493 aa19.31■□□□□ 0.68
TUBA1B-203ENST00000547476 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
TUBA1B-203ENST00000547476 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
TUBA1B-203ENST00000547476 A2MP01023 1474 aa19.3■□□□□ 0.68
TUBA1B-203ENST00000547476 INO80Q9ULG1 1556 aaPredicted RBP19.28■□□□□ 0.68
TUBA1B-203ENST00000547476 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
TUBA1B-203ENST00000547476 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
TUBA1B-203ENST00000547476 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.67
TUBA1B-203ENST00000547476 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
TUBA1B-203ENST00000547476 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
TUBA1B-203ENST00000547476 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
TUBA1B-203ENST00000547476 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
TUBA1B-203ENST00000547476 PLEKHH2Q8IVE3 1493 aa19.21■□□□□ 0.67
TUBA1B-203ENST00000547476 KIAA1107Q9UPP5 1409 aa19.2■□□□□ 0.66
TUBA1B-203ENST00000547476 ALKQ9UM73 1620 aa19.2■□□□□ 0.66
TUBA1B-203ENST00000547476 VWDEQ8N2E2 1590 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms