RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PLIN1O60240 522 aa15.67■□□□□ 0.1
RBFOX1-208ENST00000547372 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
RBFOX1-208ENST00000547372 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
RBFOX1-208ENST00000547372 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
RBFOX1-208ENST00000547372 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
RBFOX1-208ENST00000547372 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
RBFOX1-208ENST00000547372 CCDC7Q96M83 1385 aa15.64■□□□□ 0.09
RBFOX1-208ENST00000547372 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
RBFOX1-208ENST00000547372 RGS3P49796 1198 aa15.62■□□□□ 0.09
RBFOX1-208ENST00000547372 MAP3K1Q13233 1512 aa15.62■□□□□ 0.09
RBFOX1-208ENST00000547372 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
RBFOX1-208ENST00000547372 MS4A1P11836 297 aa15.61■□□□□ 0.09
RBFOX1-208ENST00000547372 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
RBFOX1-208ENST00000547372 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
RBFOX1-208ENST00000547372 SPRYD3Q8NCJ5 442 aa15.57■□□□□ 0.08
RBFOX1-208ENST00000547372 FOXD1Q16676 465 aa15.57■□□□□ 0.08
RBFOX1-208ENST00000547372 L1TD1Q5T7N2 865 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-208ENST00000547372 PANK2Q9BZ23 570 aa15.57■□□□□ 0.08
RBFOX1-208ENST00000547372 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
RBFOX1-208ENST00000547372 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
RBFOX1-208ENST00000547372 KIF7Q2M1P5 1343 aa15.54■□□□□ 0.08
RBFOX1-208ENST00000547372 BICRAQ9NZM4 1560 aa15.52■□□□□ 0.08
RBFOX1-208ENST00000547372 L3MBTL2Q969R5 705 aa15.52■□□□□ 0.08
RBFOX1-208ENST00000547372 GOLGA6L3A6NEY3 463 aa15.52■□□□□ 0.07
RBFOX1-208ENST00000547372 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
RBFOX1-208ENST00000547372 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.07
RBFOX1-208ENST00000547372 PDE4CQ08493 712 aa15.51■□□□□ 0.07
RBFOX1-208ENST00000547372 AAMPQ13685 434 aa15.51■□□□□ 0.07
RBFOX1-208ENST00000547372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.07
RBFOX1-208ENST00000547372 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
RBFOX1-208ENST00000547372 XRCC6P12956 609 aaKnown RBP eCLIP15.5■□□□□ 0.07
RBFOX1-208ENST00000547372 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
RBFOX1-208ENST00000547372 TRIM44Q96DX7 344 aaPredicted RBP15.48■□□□□ 0.07
RBFOX1-208ENST00000547372 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
RBFOX1-208ENST00000547372 CLCN1P35523 988 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 FGD1P98174 961 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 FMN1Q68DA7 1419 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 PTPRKQ15262 1439 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 CDCA7LQ96GN5 454 aa15.47■□□□□ 0.07
RBFOX1-208ENST00000547372 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
RBFOX1-208ENST00000547372 NAIPQ13075 1403 aa15.46■□□□□ 0.06
RBFOX1-208ENST00000547372 PTPN23Q9H3S7 1636 aa15.45■□□□□ 0.06
RBFOX1-208ENST00000547372 FAM161AQ3B820 660 aa15.45■□□□□ 0.06
RBFOX1-208ENST00000547372 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
RBFOX1-208ENST00000547372 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
RBFOX1-208ENST00000547372 NBPF8Q3BBV2 869 aa15.43■□□□□ 0.06
RBFOX1-208ENST00000547372 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-208ENST00000547372 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
RBFOX1-208ENST00000547372 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-208ENST00000547372 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
RBFOX1-208ENST00000547372 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
RBFOX1-208ENST00000547372 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
RBFOX1-208ENST00000547372 ESPNB1AK53 854 aa15.4■□□□□ 0.06
RBFOX1-208ENST00000547372 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
RBFOX1-208ENST00000547372 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
RBFOX1-208ENST00000547372 C20orf194Q5TEA3 1177 aa15.4■□□□□ 0.06
RBFOX1-208ENST00000547372 CUX1P39880 1505 aa15.4■□□□□ 0.06
RBFOX1-208ENST00000547372 BCL11BQ9C0K0 894 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-208ENST00000547372 DHX29Q7Z478 1369 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-208ENST00000547372 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
RBFOX1-208ENST00000547372 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 IGF1RP08069 1367 aa15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 BECN1Q14457 450 aa15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 MPHOSPH9Q99550 1183 aa15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 ZNF777Q9ULD5 760 aaPredicted RBP15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 KIAA1211Q6ZU35 1233 aa15.38■□□□□ 0.05
RBFOX1-208ENST00000547372 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
RBFOX1-208ENST00000547372 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
RBFOX1-208ENST00000547372 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
RBFOX1-208ENST00000547372 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
RBFOX1-208ENST00000547372 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
RBFOX1-208ENST00000547372 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
RBFOX1-208ENST00000547372 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-208ENST00000547372 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
RBFOX1-208ENST00000547372 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-208ENST00000547372 PDE3BQ13370 1112 aa15.3■□□□□ 0.04
RBFOX1-208ENST00000547372 CASKIN1Q8WXD9 1431 aa15.3■□□□□ 0.04
RBFOX1-208ENST00000547372 TPM2P07951 284 aa15.3■□□□□ 0.04
RBFOX1-208ENST00000547372 TRAK2O60296 914 aa15.29■□□□□ 0.04
RBFOX1-208ENST00000547372 SEC24BO95487 1268 aa15.29■□□□□ 0.04
RBFOX1-208ENST00000547372 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
RBFOX1-208ENST00000547372 KTN1Q86UP2 1357 aaKnown RBP15.29■□□□□ 0.04
RBFOX1-208ENST00000547372 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
RBFOX1-208ENST00000547372 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-208ENST00000547372 CENPQQ7L2Z9 268 aaPredicted RBP15.28■□□□□ 0.04
RBFOX1-208ENST00000547372 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
RBFOX1-208ENST00000547372 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-208ENST00000547372 MRE11P49959 708 aa15.27■□□□□ 0.04
RBFOX1-208ENST00000547372 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.04
RBFOX1-208ENST00000547372 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
RBFOX1-208ENST00000547372 UPF2Q9HAU5 1272 aaKnown RBP15.27■□□□□ 0.03
RBFOX1-208ENST00000547372 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.03
RBFOX1-208ENST00000547372 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
RBFOX1-208ENST00000547372 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-208ENST00000547372 USP47Q96K76 1375 aa15.25■□□□□ 0.03
RBFOX1-208ENST00000547372 MCM4P33991 863 aa15.25■□□□□ 0.03
RBFOX1-208ENST00000547372 CHMP4BQ9H444 224 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms