RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 RIMS1Q86UR5 1692 aaKnown RBP9.83□□□□□ -0.84
PFDN5-205ENST00000547228 PTPRTO14522 1441 aa9.82□□□□□ -0.84
PFDN5-205ENST00000547228 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
PFDN5-205ENST00000547228 UBAP1LF5GYI3 381 aa9.82□□□□□ -0.84
PFDN5-205ENST00000547228 PIAS4Q8N2W9 510 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-205ENST00000547228 ARHGEF40Q8TER5 1519 aa9.8□□□□□ -0.84
PFDN5-205ENST00000547228 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
PFDN5-205ENST00000547228 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
PFDN5-205ENST00000547228 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
PFDN5-205ENST00000547228 ZFYVE16Q7Z3T8 1539 aa9.78□□□□□ -0.84
PFDN5-205ENST00000547228 FRMPD1Q5SYB0 1578 aa9.78□□□□□ -0.84
PFDN5-205ENST00000547228 ATP10AO60312 1499 aa9.78□□□□□ -0.84
PFDN5-205ENST00000547228 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
PFDN5-205ENST00000547228 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
PFDN5-205ENST00000547228 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
PFDN5-205ENST00000547228 C9orf84Q5VXU9 1444 aa9.74□□□□□ -0.85
PFDN5-205ENST00000547228 ZMYM4Q5VZL5 1548 aa9.74□□□□□ -0.85
PFDN5-205ENST00000547228 ARHGEF12Q9NZN5 1544 aa9.73□□□□□ -0.85
PFDN5-205ENST00000547228 ADRA2BP18089 450 aa9.73□□□□□ -0.85
PFDN5-205ENST00000547228 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
PFDN5-205ENST00000547228 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
PFDN5-205ENST00000547228 CFAP74Q9C0B2 1584 aa9.72□□□□□ -0.85
PFDN5-205ENST00000547228 PREX1Q8TCU6 1659 aa9.72□□□□□ -0.85
PFDN5-205ENST00000547228 TOM1O60784 492 aa9.72□□□□□ -0.85
PFDN5-205ENST00000547228 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
PFDN5-205ENST00000547228 PKD2Q13563 968 aa9.72□□□□□ -0.85
PFDN5-205ENST00000547228 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
PFDN5-205ENST00000547228 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.86
PFDN5-205ENST00000547228 CDK11AQ9UQ88 783 aaPredicted RBP9.71□□□□□ -0.86
PFDN5-205ENST00000547228 PLCH2O75038 1416 aa9.71□□□□□ -0.86
PFDN5-205ENST00000547228 NUP153P49790 1475 aaKnown RBP9.71□□□□□ -0.86
PFDN5-205ENST00000547228 LTBP4Q8N2S1 1624 aa9.71□□□□□ -0.86
PFDN5-205ENST00000547228 AFAP1Q8N556 730 aa9.7□□□□□ -0.86
PFDN5-205ENST00000547228 HECW1Q76N89 1606 aa9.7□□□□□ -0.86
PFDN5-205ENST00000547228 CTTNBP2Q8WZ74 1663 aa9.7□□□□□ -0.86
PFDN5-205ENST00000547228 HSPA1LP34931 641 aa9.69□□□□□ -0.86
PFDN5-205ENST00000547228 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
PFDN5-205ENST00000547228 RICTORQ6R327 1708 aa9.69□□□□□ -0.86
PFDN5-205ENST00000547228 RAPGEF6Q8TEU7 1601 aa9.69□□□□□ -0.86
PFDN5-205ENST00000547228 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
PFDN5-205ENST00000547228 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
PFDN5-205ENST00000547228 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
PFDN5-205ENST00000547228 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
PFDN5-205ENST00000547228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.68□□□□□ -0.86
PFDN5-205ENST00000547228 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
PFDN5-205ENST00000547228 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
PFDN5-205ENST00000547228 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
PFDN5-205ENST00000547228 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
PFDN5-205ENST00000547228 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
PFDN5-205ENST00000547228 ARXQ96QS3 562 aa9.64□□□□□ -0.87
PFDN5-205ENST00000547228 NPATQ14207 1427 aa9.63□□□□□ -0.87
PFDN5-205ENST00000547228 ZMYM3Q14202 1370 aa9.63□□□□□ -0.87
PFDN5-205ENST00000547228 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
PFDN5-205ENST00000547228 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
PFDN5-205ENST00000547228 SETD1BQ9UPS6 1966 aaKnown RBP9.62□□□□□ -0.87
PFDN5-205ENST00000547228 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
PFDN5-205ENST00000547228 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
PFDN5-205ENST00000547228 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
PFDN5-205ENST00000547228 MED1Q15648 1581 aaPredicted RBP9.59□□□□□ -0.87
PFDN5-205ENST00000547228 AGLP35573 1532 aa9.59□□□□□ -0.87
PFDN5-205ENST00000547228 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
PFDN5-205ENST00000547228 PTPRKQ15262 1439 aa9.58□□□□□ -0.88
PFDN5-205ENST00000547228 PLA2R1Q13018 1463 aa9.58□□□□□ -0.88
PFDN5-205ENST00000547228 REREQ9P2R6 1566 aa9.57□□□□□ -0.88
PFDN5-205ENST00000547228 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
PFDN5-205ENST00000547228 ANKLE2Q86XL3 938 aa9.56□□□□□ -0.88
PFDN5-205ENST00000547228 CLIP1P30622 1438 aa9.56□□□□□ -0.88
PFDN5-205ENST00000547228 GGT6Q6P531 493 aa9.55□□□□□ -0.88
PFDN5-205ENST00000547228 TCOF1Q13428 1488 aaKnown RBP9.54□□□□□ -0.88
PFDN5-205ENST00000547228 C3P01024 1663 aa9.54□□□□□ -0.88
PFDN5-205ENST00000547228 KDM5CP41229 1560 aa9.54□□□□□ -0.88
PFDN5-205ENST00000547228 CPS1P31327 1500 aa9.53□□□□□ -0.88
PFDN5-205ENST00000547228 CDK13Q14004 1512 aaKnown RBP9.53□□□□□ -0.88
PFDN5-205ENST00000547228 THEMISQ8N1K5 641 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-205ENST00000547228 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
PFDN5-205ENST00000547228 DIP2CQ9Y2E4 1556 aa9.53□□□□□ -0.88
PFDN5-205ENST00000547228 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
PFDN5-205ENST00000547228 TROQ12816 1431 aaPredicted RBP9.52□□□□□ -0.89
PFDN5-205ENST00000547228 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
PFDN5-205ENST00000547228 SHANK2Q9UPX8 1470 aa9.52□□□□□ -0.89
PFDN5-205ENST00000547228 RGS17Q9UGC6 210 aaPredicted RBP9.5□□□□□ -0.89
PFDN5-205ENST00000547228 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
PFDN5-205ENST00000547228 POTEHQ6S545 545 aa9.49□□□□□ -0.89
PFDN5-205ENST00000547228 EEA1Q15075 1411 aa9.48□□□□□ -0.89
PFDN5-205ENST00000547228 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
PFDN5-205ENST00000547228 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
PFDN5-205ENST00000547228 KIF14Q15058 1648 aa9.47□□□□□ -0.89
PFDN5-205ENST00000547228 MYO5CQ9NQX4 1742 aa9.47□□□□□ -0.89
PFDN5-205ENST00000547228 CEP170BQ9Y4F5 1589 aaPredicted RBP9.46□□□□□ -0.89
PFDN5-205ENST00000547228 ABCA6Q8N139 1617 aa9.46□□□□□ -0.89
PFDN5-205ENST00000547228 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
PFDN5-205ENST00000547228 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
PFDN5-205ENST00000547228 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
PFDN5-205ENST00000547228 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
PFDN5-205ENST00000547228 BCANQ96GW7 911 aa9.44□□□□□ -0.9
PFDN5-205ENST00000547228 CFDP1Q9UEE9 299 aaPredicted RBP9.44□□□□□ -0.9
PFDN5-205ENST00000547228 TNRQ92752 1358 aa9.44□□□□□ -0.9
PFDN5-205ENST00000547228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.44□□□□□ -0.9
PFDN5-205ENST00000547228 MROH2AA6NES4 1674 aa9.44□□□□□ -0.9
PFDN5-205ENST00000547228 A2MP01023 1474 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms