RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
VDR-204ENST00000547065 KIF14Q15058 1648 aa26.87■■□□□ 1.89
VDR-204ENST00000547065 PPP1R15AO75807 674 aaPredicted RBP26.87■■□□□ 1.89
VDR-204ENST00000547065 MIER1Q8N108 512 aa26.85■■□□□ 1.89
VDR-204ENST00000547065 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
VDR-204ENST00000547065 CAMSAP2Q08AD1 1489 aa26.85■■□□□ 1.89
VDR-204ENST00000547065 ABCC10Q5T3U5 1492 aa26.82■■□□□ 1.88
VDR-204ENST00000547065 TONSLQ96HA7 1378 aa26.81■■□□□ 1.88
VDR-204ENST00000547065 KDM6BO15054 1643 aa26.79■■□□□ 1.88
VDR-204ENST00000547065 ZNF777Q9ULD5 760 aaPredicted RBP26.79■■□□□ 1.88
VDR-204ENST00000547065 MPHOSPH9Q99550 1183 aa26.78■■□□□ 1.88
VDR-204ENST00000547065 CENPBP07199 599 aaPredicted RBP26.73■■□□□ 1.87
VDR-204ENST00000547065 DENND4BO75064 1496 aaPredicted RBP26.72■■□□□ 1.87
VDR-204ENST00000547065 NCOA1Q15788 1441 aa26.72■■□□□ 1.87
VDR-204ENST00000547065 ADGRL2O95490 1459 aa26.72■■□□□ 1.87
VDR-204ENST00000547065 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
VDR-204ENST00000547065 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.86
VDR-204ENST00000547065 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
VDR-204ENST00000547065 ERCC6L2Q5T890 1561 aa26.68■■□□□ 1.86
VDR-204ENST00000547065 ABCC2Q92887 1545 aa26.66■■□□□ 1.86
VDR-204ENST00000547065 ADGBQ8N7X0 1667 aa26.66■■□□□ 1.86
VDR-204ENST00000547065 CROCC2H7BZ55 1655 aa26.64■■□□□ 1.85
VDR-204ENST00000547065 SHANK2Q9UPX8 1470 aa26.63■■□□□ 1.85
VDR-204ENST00000547065 TSPY4P0CV99 314 aa26.61■■□□□ 1.85
VDR-204ENST00000547065 TSPY10P0CW01 314 aa26.61■■□□□ 1.85
VDR-204ENST00000547065 RSPH4AQ5TD94 716 aa26.59■■□□□ 1.85
VDR-204ENST00000547065 SLC4A1APQ9BWU0 796 aaKnown RBP26.59■■□□□ 1.85
VDR-204ENST00000547065 ANKRD30BQ9BXX2 1392 aa26.59■■□□□ 1.85
VDR-204ENST00000547065 UHRF1BP1LA0JNW5 1464 aa26.58■■□□□ 1.85
VDR-204ENST00000547065 C9orf84Q5VXU9 1444 aa26.58■■□□□ 1.84
VDR-204ENST00000547065 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
VDR-204ENST00000547065 ARHGEF5Q12774 1597 aa26.57■■□□□ 1.84
VDR-204ENST00000547065 HNRNPMP52272 730 aaKnown RBP eCLIP26.55■■□□□ 1.84
VDR-204ENST00000547065 FOXD1Q16676 465 aa26.54■■□□□ 1.84
VDR-204ENST00000547065 MBD5Q9P267 1494 aa26.54■■□□□ 1.84
VDR-204ENST00000547065 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
VDR-204ENST00000547065 PREX2Q70Z35 1606 aa26.53■■□□□ 1.84
VDR-204ENST00000547065 PZPP20742 1482 aa26.52■■□□□ 1.84
VDR-204ENST00000547065 CDC42BPBQ9Y5S2 1711 aa26.5■■□□□ 1.83
VDR-204ENST00000547065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
VDR-204ENST00000547065 RPRD2Q5VT52 1461 aaKnown RBP26.49■■□□□ 1.83
VDR-204ENST00000547065 SCAF1Q9H7N4 1312 aaKnown RBP26.49■■□□□ 1.83
VDR-204ENST00000547065 SAMD9LQ8IVG5 1584 aa26.48■■□□□ 1.83
VDR-204ENST00000547065 YTHDC1Q96MU7 727 aaKnown RBP26.48■■□□□ 1.83
VDR-204ENST00000547065 CCDC141Q6ZP82 1450 aa26.48■■□□□ 1.83
VDR-204ENST00000547065 L3MBTL2Q969R5 705 aa26.46■■□□□ 1.83
VDR-204ENST00000547065 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.82
VDR-204ENST00000547065 ARHGAP5Q13017 1502 aa26.44■■□□□ 1.82
VDR-204ENST00000547065 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
VDR-204ENST00000547065 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
VDR-204ENST00000547065 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
VDR-204ENST00000547065 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
VDR-204ENST00000547065 PLEKHH2Q8IVE3 1493 aa26.43■■□□□ 1.82
VDR-204ENST00000547065 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
VDR-204ENST00000547065 HIRIP3Q9BW71 556 aaPredicted RBP26.41■■□□□ 1.82
VDR-204ENST00000547065 PKD2Q13563 968 aa26.4■■□□□ 1.82
VDR-204ENST00000547065 NUP155O75694 1391 aa26.39■■□□□ 1.82
VDR-204ENST00000547065 PLCH2O75038 1416 aa26.38■■□□□ 1.81
VDR-204ENST00000547065 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
VDR-204ENST00000547065 KDM5DQ9BY66 1539 aa26.36■■□□□ 1.81
VDR-204ENST00000547065 EFCAB2Q5VUJ9 269 aa26.35■■□□□ 1.81
VDR-204ENST00000547065 MAST1Q9Y2H9 1570 aa26.35■■□□□ 1.81
VDR-204ENST00000547065 SYCP2Q9BX26 1530 aa26.35■■□□□ 1.81
VDR-204ENST00000547065 TEX14Q8IWB6 1497 aa26.34■■□□□ 1.81
VDR-204ENST00000547065 EIF4G2P78344 907 aaKnown RBP eCLIP26.31■■□□□ 1.8
VDR-204ENST00000547065 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
VDR-204ENST00000547065 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
VDR-204ENST00000547065 NBPF8Q3BBV2 869 aa26.27■■□□□ 1.8
VDR-204ENST00000547065 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
VDR-204ENST00000547065 ARAP3Q8WWN8 1544 aa26.24■■□□□ 1.79
VDR-204ENST00000547065 GTF3C3Q9Y5Q9 886 aa26.23■■□□□ 1.79
VDR-204ENST00000547065 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
VDR-204ENST00000547065 WDR7Q9Y4E6 1490 aa26.22■■□□□ 1.79
VDR-204ENST00000547065 ANP32CO43423 234 aa26.2■■□□□ 1.79
VDR-204ENST00000547065 ABCC1P33527 1531 aa26.18■■□□□ 1.78
VDR-204ENST00000547065 DUOX2Q9NRD8 1548 aa26.18■■□□□ 1.78
VDR-204ENST00000547065 FAM135AQ9P2D6 1515 aa26.17■■□□□ 1.78
VDR-204ENST00000547065 CCER2I3L3R5 266 aa26.17■■□□□ 1.78
VDR-204ENST00000547065 UNC13BO14795 1591 aa26.14■■□□□ 1.78
VDR-204ENST00000547065 WASHC2AQ641Q2 1341 aa26.14■■□□□ 1.78
VDR-204ENST00000547065 TRAPPC8Q9Y2L5 1435 aa26.14■■□□□ 1.77
VDR-204ENST00000547065 ERBINQ96RT1 1412 aa26.13■■□□□ 1.77
VDR-204ENST00000547065 RTEL1-TNFRSF6BF6WH68 1400 aa26.11■■□□□ 1.77
VDR-204ENST00000547065 SPATA31E1Q6ZUB1 1445 aa26.11■■□□□ 1.77
VDR-204ENST00000547065 UHRF1BP1Q6BDS2 1440 aa26.1■■□□□ 1.77
VDR-204ENST00000547065 SPAG9O60271 1321 aaKnown RBP26.1■■□□□ 1.77
VDR-204ENST00000547065 ASXL2Q76L83 1435 aa26.09■■□□□ 1.77
VDR-204ENST00000547065 NPM1P06748 294 aaKnown RBP eCLIP26.09■■□□□ 1.77
VDR-204ENST00000547065 ABCA9Q8IUA7 1624 aa26.08■■□□□ 1.77
VDR-204ENST00000547065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.77
VDR-204ENST00000547065 CCDC7Q96M83 1385 aa26.05■■□□□ 1.76
VDR-204ENST00000547065 FANCAO15360 1455 aa26.05■■□□□ 1.76
VDR-204ENST00000547065 AFAP1Q8N556 730 aa26.05■■□□□ 1.76
VDR-204ENST00000547065 IQGAP3Q86VI3 1631 aa26.04■■□□□ 1.76
VDR-204ENST00000547065 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
VDR-204ENST00000547065 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
VDR-204ENST00000547065 ZNF326Q5BKZ1 582 aaKnown RBP26.02■■□□□ 1.76
VDR-204ENST00000547065 CCDC144AA2RUR9 1427 aa26.01■■□□□ 1.75
VDR-204ENST00000547065 PLA2R1Q13018 1463 aa25.98■■□□□ 1.75
VDR-204ENST00000547065 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 892.2 ms