RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.64
SLC38A1-204ENST00000546893 DAPK1P53355 1430 aa19■□□□□ 0.63
SLC38A1-204ENST00000546893 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.631e-6■■■□□ 15
SLC38A1-204ENST00000546893 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
SLC38A1-204ENST00000546893 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
SLC38A1-204ENST00000546893 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
SLC38A1-204ENST00000546893 RAPGEF6Q8TEU7 1601 aa18.98■□□□□ 0.63
SLC38A1-204ENST00000546893 RPRD2Q5VT52 1461 aaKnown RBP18.97■□□□□ 0.63
SLC38A1-204ENST00000546893 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
SLC38A1-204ENST00000546893 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SLC38A1-204ENST00000546893 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
SLC38A1-204ENST00000546893 ITSN2Q9NZM3 1697 aa18.95■□□□□ 0.62
SLC38A1-204ENST00000546893 CNTLNQ9NXG0 1405 aa18.95■□□□□ 0.62
SLC38A1-204ENST00000546893 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
SLC38A1-204ENST00000546893 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
SLC38A1-204ENST00000546893 ABCC5O15440 1437 aa18.92■□□□□ 0.62
SLC38A1-204ENST00000546893 NCOA1Q15788 1441 aa18.92■□□□□ 0.62
SLC38A1-204ENST00000546893 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
SLC38A1-204ENST00000546893 NUP153P49790 1475 aaKnown RBP18.92■□□□□ 0.62
SLC38A1-204ENST00000546893 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
SLC38A1-204ENST00000546893 KDM6BO15054 1643 aa18.91■□□□□ 0.62
SLC38A1-204ENST00000546893 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
SLC38A1-204ENST00000546893 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
SLC38A1-204ENST00000546893 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
SLC38A1-204ENST00000546893 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SLC38A1-204ENST00000546893 ADGBQ8N7X0 1667 aa18.9■□□□□ 0.62
SLC38A1-204ENST00000546893 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
SLC38A1-204ENST00000546893 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
SLC38A1-204ENST00000546893 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
SLC38A1-204ENST00000546893 ADGRL2O95490 1459 aa18.89■□□□□ 0.61
SLC38A1-204ENST00000546893 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
SLC38A1-204ENST00000546893 CCDC7Q96M83 1385 aa18.86■□□□□ 0.61
SLC38A1-204ENST00000546893 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
SLC38A1-204ENST00000546893 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
SLC38A1-204ENST00000546893 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.83■□□□□ 0.6
SLC38A1-204ENST00000546893 CARMIL2Q6F5E8 1435 aa18.82■□□□□ 0.6
SLC38A1-204ENST00000546893 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
SLC38A1-204ENST00000546893 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
SLC38A1-204ENST00000546893 CAMSAP2Q08AD1 1489 aa18.81■□□□□ 0.6
SLC38A1-204ENST00000546893 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
SLC38A1-204ENST00000546893 SHANK2Q9UPX8 1470 aa18.8■□□□□ 0.6
SLC38A1-204ENST00000546893 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
SLC38A1-204ENST00000546893 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
SLC38A1-204ENST00000546893 KIAA1107Q9UPP5 1409 aa18.78■□□□□ 0.6
SLC38A1-204ENST00000546893 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
SLC38A1-204ENST00000546893 PZPP20742 1482 aa18.77■□□□□ 0.6
SLC38A1-204ENST00000546893 MBD5Q9P267 1494 aa18.77■□□□□ 0.6
SLC38A1-204ENST00000546893 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
SLC38A1-204ENST00000546893 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
SLC38A1-204ENST00000546893 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.59
SLC38A1-204ENST00000546893 EIF5BO60841 1220 aaKnown RBP18.75■□□□□ 0.59
SLC38A1-204ENST00000546893 CFDP1Q9UEE9 299 aaPredicted RBP18.75■□□□□ 0.59
SLC38A1-204ENST00000546893 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
SLC38A1-204ENST00000546893 NUP160Q12769 1436 aa18.74■□□□□ 0.59
SLC38A1-204ENST00000546893 KIF14Q15058 1648 aa18.74■□□□□ 0.59
SLC38A1-204ENST00000546893 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
SLC38A1-204ENST00000546893 KDM5DQ9BY66 1539 aa18.72■□□□□ 0.59
SLC38A1-204ENST00000546893 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
SLC38A1-204ENST00000546893 FBLN2P98095 1184 aa18.72■□□□□ 0.59
SLC38A1-204ENST00000546893 ARHGEF12Q9NZN5 1544 aa18.72■□□□□ 0.59
SLC38A1-204ENST00000546893 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
SLC38A1-204ENST00000546893 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
SLC38A1-204ENST00000546893 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
SLC38A1-204ENST00000546893 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
SLC38A1-204ENST00000546893 RTN4Q9NQC3 1192 aaKnown RBP18.69■□□□□ 0.58
SLC38A1-204ENST00000546893 KIF7Q2M1P5 1343 aa18.69■□□□□ 0.58
SLC38A1-204ENST00000546893 ABCA8O94911 1581 aa18.68■□□□□ 0.58
SLC38A1-204ENST00000546893 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
SLC38A1-204ENST00000546893 NBR1Q14596 966 aa18.67■□□□□ 0.58
SLC38A1-204ENST00000546893 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 KTN1Q86UP2 1357 aaKnown RBP18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 PKNOX2Q96KN3 472 aa18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 MRS2Q9HD23 443 aa18.66■□□□□ 0.58
SLC38A1-204ENST00000546893 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
SLC38A1-204ENST00000546893 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
SLC38A1-204ENST00000546893 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.58
SLC38A1-204ENST00000546893 FOXD1Q16676 465 aa18.63■□□□□ 0.57
SLC38A1-204ENST00000546893 PLEKHD1A6NEE1 506 aa18.63■□□□□ 0.57
SLC38A1-204ENST00000546893 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SLC38A1-204ENST00000546893 KDM5CP41229 1560 aa18.63■□□□□ 0.57
SLC38A1-204ENST00000546893 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
SLC38A1-204ENST00000546893 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
SLC38A1-204ENST00000546893 USP47Q96K76 1375 aa18.62■□□□□ 0.57
SLC38A1-204ENST00000546893 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
SLC38A1-204ENST00000546893 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
SLC38A1-204ENST00000546893 JPH4Q96JJ6 628 aa18.6■□□□□ 0.57
SLC38A1-204ENST00000546893 PTPRGP23470 1445 aa18.6■□□□□ 0.57
SLC38A1-204ENST00000546893 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.57
SLC38A1-204ENST00000546893 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.57
SLC38A1-204ENST00000546893 PKD2Q13563 968 aa18.57■□□□□ 0.56
SLC38A1-204ENST00000546893 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
SLC38A1-204ENST00000546893 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
SLC38A1-204ENST00000546893 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
SLC38A1-204ENST00000546893 ATP10BO94823 1461 aa18.55■□□□□ 0.56
SLC38A1-204ENST00000546893 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
SLC38A1-204ENST00000546893 CHD1O14646 1710 aa18.54■□□□□ 0.56
SLC38A1-204ENST00000546893 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
SLC38A1-204ENST00000546893 NUP155O75694 1391 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms