RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
TMEM116-203ENST00000546537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.65■□□□□ 0.58
TMEM116-203ENST00000546537 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
TMEM116-203ENST00000546537 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.58
TMEM116-203ENST00000546537 PLEKHD1A6NEE1 506 aa18.61■□□□□ 0.57
TMEM116-203ENST00000546537 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
TMEM116-203ENST00000546537 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
TMEM116-203ENST00000546537 ATP10AO60312 1499 aa18.58■□□□□ 0.56
TMEM116-203ENST00000546537 PTPRTO14522 1441 aa18.56■□□□□ 0.56
TMEM116-203ENST00000546537 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
TMEM116-203ENST00000546537 UHRF1BP1Q6BDS2 1440 aa18.56■□□□□ 0.56
TMEM116-203ENST00000546537 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
TMEM116-203ENST00000546537 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
TMEM116-203ENST00000546537 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
TMEM116-203ENST00000546537 PLCH2O75038 1416 aa18.51■□□□□ 0.55
TMEM116-203ENST00000546537 C3P01024 1663 aa18.48■□□□□ 0.55
TMEM116-203ENST00000546537 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
TMEM116-203ENST00000546537 CDK13Q14004 1512 aaKnown RBP18.43■□□□□ 0.54
TMEM116-203ENST00000546537 KDM5CP41229 1560 aa18.42■□□□□ 0.54
TMEM116-203ENST00000546537 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
TMEM116-203ENST00000546537 ZNF518AQ6AHZ1 1483 aa18.42■□□□□ 0.54
TMEM116-203ENST00000546537 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
TMEM116-203ENST00000546537 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
TMEM116-203ENST00000546537 DIP2CQ9Y2E4 1556 aa18.41■□□□□ 0.54
TMEM116-203ENST00000546537 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
TMEM116-203ENST00000546537 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
TMEM116-203ENST00000546537 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.53
TMEM116-203ENST00000546537 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
TMEM116-203ENST00000546537 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
TMEM116-203ENST00000546537 AGLP35573 1532 aa18.35■□□□□ 0.53
TMEM116-203ENST00000546537 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
TMEM116-203ENST00000546537 KIF14Q15058 1648 aa18.33■□□□□ 0.52
TMEM116-203ENST00000546537 MLH3Q9UHC1 1453 aa18.32■□□□□ 0.52
TMEM116-203ENST00000546537 UBAP1LF5GYI3 381 aa18.31■□□□□ 0.52
TMEM116-203ENST00000546537 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
TMEM116-203ENST00000546537 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
TMEM116-203ENST00000546537 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
TMEM116-203ENST00000546537 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
TMEM116-203ENST00000546537 ZNF335Q9H4Z2 1342 aaPredicted RBP18.29■□□□□ 0.52
TMEM116-203ENST00000546537 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
TMEM116-203ENST00000546537 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
TMEM116-203ENST00000546537 NPATQ14207 1427 aa18.27■□□□□ 0.52
TMEM116-203ENST00000546537 MED1Q15648 1581 aaPredicted RBP18.26■□□□□ 0.51
TMEM116-203ENST00000546537 NCKAP5LQ9HCH0 1330 aa18.25■□□□□ 0.51
TMEM116-203ENST00000546537 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
TMEM116-203ENST00000546537 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
TMEM116-203ENST00000546537 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
TMEM116-203ENST00000546537 ZNF142P52746 1687 aaPredicted RBP18.24■□□□□ 0.51
TMEM116-203ENST00000546537 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
TMEM116-203ENST00000546537 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
TMEM116-203ENST00000546537 EEA1Q15075 1411 aa18.23■□□□□ 0.51
TMEM116-203ENST00000546537 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
TMEM116-203ENST00000546537 ABCC1P33527 1531 aa18.22■□□□□ 0.51
TMEM116-203ENST00000546537 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
TMEM116-203ENST00000546537 MYO3AQ8NEV4 1616 aa18.2■□□□□ 0.5
TMEM116-203ENST00000546537 PKD2Q13563 968 aa18.2■□□□□ 0.5
TMEM116-203ENST00000546537 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
TMEM116-203ENST00000546537 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
TMEM116-203ENST00000546537 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
TMEM116-203ENST00000546537 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
TMEM116-203ENST00000546537 CLIP1P30622 1438 aa18.19■□□□□ 0.5
TMEM116-203ENST00000546537 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
TMEM116-203ENST00000546537 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
TMEM116-203ENST00000546537 HSPA1LP34931 641 aa18.17■□□□□ 0.5
TMEM116-203ENST00000546537 CLTCQ00610 1675 aaKnown RBP18.16■□□□□ 0.5
TMEM116-203ENST00000546537 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
TMEM116-203ENST00000546537 SAMD9LQ8IVG5 1584 aa18.12■□□□□ 0.49
TMEM116-203ENST00000546537 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
TMEM116-203ENST00000546537 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
TMEM116-203ENST00000546537 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
TMEM116-203ENST00000546537 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
TMEM116-203ENST00000546537 CDC42BPAQ5VT25 1732 aa18.11■□□□□ 0.49
TMEM116-203ENST00000546537 TOM1O60784 492 aa18.1■□□□□ 0.49
TMEM116-203ENST00000546537 CPS1P31327 1500 aa18.09■□□□□ 0.49
TMEM116-203ENST00000546537 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.48
TMEM116-203ENST00000546537 PLXNC1O60486 1568 aa18.08■□□□□ 0.48
TMEM116-203ENST00000546537 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
TMEM116-203ENST00000546537 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
TMEM116-203ENST00000546537 A2ML1A8K2U0 1454 aa18.04■□□□□ 0.48
TMEM116-203ENST00000546537 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
TMEM116-203ENST00000546537 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
TMEM116-203ENST00000546537 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
TMEM116-203ENST00000546537 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
TMEM116-203ENST00000546537 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
TMEM116-203ENST00000546537 SPAG9O60271 1321 aaKnown RBP18.02■□□□□ 0.48
TMEM116-203ENST00000546537 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
TMEM116-203ENST00000546537 A2MP01023 1474 aa18.01■□□□□ 0.47
TMEM116-203ENST00000546537 GGT6Q6P531 493 aa17.99■□□□□ 0.47
TMEM116-203ENST00000546537 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
TMEM116-203ENST00000546537 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
TMEM116-203ENST00000546537 VWDEQ8N2E2 1590 aa17.98■□□□□ 0.47
TMEM116-203ENST00000546537 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMEM116-203ENST00000546537 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
TMEM116-203ENST00000546537 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
TMEM116-203ENST00000546537 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
TMEM116-203ENST00000546537 KIAA1107Q9UPP5 1409 aa17.95■□□□□ 0.46
TMEM116-203ENST00000546537 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
TMEM116-203ENST00000546537 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
TMEM116-203ENST00000546537 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
TMEM116-203ENST00000546537 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms