RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 STRCQ7RTU9 1775 aa30.48■■■□□ 2.47
C12orf43-209ENST00000546272 PLEKHD1A6NEE1 506 aa30.47■■■□□ 2.47
C12orf43-209ENST00000546272 HECW1Q76N89 1606 aa30.44■■■□□ 2.46
C12orf43-209ENST00000546272 ARHGEF12Q9NZN5 1544 aa30.43■■■□□ 2.46
C12orf43-209ENST00000546272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.43■■■□□ 2.46
C12orf43-209ENST00000546272 SETD1BQ9UPS6 1966 aaKnown RBP30.37■■■□□ 2.45
C12orf43-209ENST00000546272 CEBPAP49715 358 aaPredicted RBP30.37■■■□□ 2.45
C12orf43-209ENST00000546272 ATP10AO60312 1499 aa30.35■■■□□ 2.45
C12orf43-209ENST00000546272 UHRF1BP1Q6BDS2 1440 aa30.35■■■□□ 2.45
C12orf43-209ENST00000546272 PTPRTO14522 1441 aa30.32■■■□□ 2.44
C12orf43-209ENST00000546272 C9orf84Q5VXU9 1444 aa30.32■■■□□ 2.44
C12orf43-209ENST00000546272 SCAPERQ9BY12 1400 aa30.32■■■□□ 2.44
C12orf43-209ENST00000546272 IQSEC2Q5JU85 1478 aa30.27■■■□□ 2.44
C12orf43-209ENST00000546272 LTBP4Q8N2S1 1624 aa30.24■■■□□ 2.43
C12orf43-209ENST00000546272 PLCH2O75038 1416 aa30.24■■■□□ 2.43
C12orf43-209ENST00000546272 RANGAP1P46060 587 aaPredicted RBP30.16■■■□□ 2.42
C12orf43-209ENST00000546272 EFCAB2Q5VUJ9 269 aa30.13■■■□□ 2.41
C12orf43-209ENST00000546272 C3P01024 1663 aa30.13■■■□□ 2.41
C12orf43-209ENST00000546272 CSRNP3Q8WYN3 585 aa30.12■■■□□ 2.41
C12orf43-209ENST00000546272 ZNF518AQ6AHZ1 1483 aa30.11■■■□□ 2.41
C12orf43-209ENST00000546272 MYO5CQ9NQX4 1742 aa30.1■■■□□ 2.41
C12orf43-209ENST00000546272 CDK13Q14004 1512 aaKnown RBP30.09■■■□□ 2.41
C12orf43-209ENST00000546272 NCOA1Q15788 1441 aa30.07■■■□□ 2.4
C12orf43-209ENST00000546272 TRAPPC8Q9Y2L5 1435 aa30.06■■■□□ 2.4
C12orf43-209ENST00000546272 KDM5CP41229 1560 aa30.05■■■□□ 2.4
C12orf43-209ENST00000546272 REREQ9P2R6 1566 aa30.05■■■□□ 2.4
C12orf43-209ENST00000546272 ESF1Q9H501 851 aaKnown RBP30.03■■■□□ 2.4
C12orf43-209ENST00000546272 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
C12orf43-209ENST00000546272 MYT1LQ9UL68 1186 aa30.02■■■□□ 2.4
C12orf43-209ENST00000546272 AFAP1Q8N556 730 aa30.01■■■□□ 2.4
C12orf43-209ENST00000546272 UBAP1LF5GYI3 381 aa29.98■■■□□ 2.39
C12orf43-209ENST00000546272 AGLP35573 1532 aa29.96■■■□□ 2.39
C12orf43-209ENST00000546272 ABCA6Q8N139 1617 aa29.94■■■□□ 2.38
C12orf43-209ENST00000546272 CAMSAP1Q5T5Y3 1602 aa29.94■■■□□ 2.38
C12orf43-209ENST00000546272 ARHGAP5Q13017 1502 aa29.93■■■□□ 2.38
C12orf43-209ENST00000546272 MLH3Q9UHC1 1453 aa29.92■■■□□ 2.38
C12orf43-209ENST00000546272 CNTLNQ9NXG0 1405 aa29.92■■■□□ 2.38
C12orf43-209ENST00000546272 CDK11AQ9UQ88 783 aaPredicted RBP29.91■■■□□ 2.38
C12orf43-209ENST00000546272 ZNF335Q9H4Z2 1342 aaPredicted RBP29.9■■■□□ 2.38
C12orf43-209ENST00000546272 KIF14Q15058 1648 aa29.89■■■□□ 2.38
C12orf43-209ENST00000546272 NPATQ14207 1427 aa29.87■■■□□ 2.37
C12orf43-209ENST00000546272 ATP1B4Q9UN42 357 aaPredicted RBP29.84■■■□□ 2.37
C12orf43-209ENST00000546272 NCKAP5LQ9HCH0 1330 aa29.83■■■□□ 2.37
C12orf43-209ENST00000546272 MROH2AA6NES4 1674 aa29.82■■■□□ 2.36
C12orf43-209ENST00000546272 EEA1Q15075 1411 aa29.82■■■□□ 2.36
C12orf43-209ENST00000546272 MED1Q15648 1581 aaPredicted RBP29.8■■■□□ 2.36
C12orf43-209ENST00000546272 TROQ12816 1431 aaPredicted RBP29.8■■■□□ 2.36
C12orf43-209ENST00000546272 CDC42BPBQ9Y5S2 1711 aa29.79■■■□□ 2.36
C12orf43-209ENST00000546272 PKD2Q13563 968 aa29.78■■■□□ 2.36
C12orf43-209ENST00000546272 CLIP1P30622 1438 aa29.77■■■□□ 2.36
C12orf43-209ENST00000546272 FMN1Q68DA7 1419 aa29.77■■■□□ 2.36
C12orf43-209ENST00000546272 PLA2R1Q13018 1463 aa29.77■■■□□ 2.36
C12orf43-209ENST00000546272 KIDINS220Q9ULH0 1771 aa29.75■■■□□ 2.35
C12orf43-209ENST00000546272 ZMYM3Q14202 1370 aa29.74■■■□□ 2.35
C12orf43-209ENST00000546272 SUPT6HQ7KZ85 1726 aaKnown RBP29.74■■■□□ 2.35
C12orf43-209ENST00000546272 ABCC1P33527 1531 aa29.73■■■□□ 2.35
C12orf43-209ENST00000546272 ZNF142P52746 1687 aaPredicted RBP29.73■■■□□ 2.35
C12orf43-209ENST00000546272 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
C12orf43-209ENST00000546272 HSPA1LP34931 641 aa29.71■■■□□ 2.35
C12orf43-209ENST00000546272 TCOF1Q13428 1488 aaKnown RBP29.71■■■□□ 2.35
C12orf43-209ENST00000546272 PREX2Q70Z35 1606 aa29.69■■■□□ 2.34
C12orf43-209ENST00000546272 MYO3AQ8NEV4 1616 aa29.69■■■□□ 2.34
C12orf43-209ENST00000546272 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
C12orf43-209ENST00000546272 PPP6R1Q9UPN7 881 aa29.67■■■□□ 2.34
C12orf43-209ENST00000546272 CEP170BQ9Y4F5 1589 aaPredicted RBP29.66■■■□□ 2.34
C12orf43-209ENST00000546272 TOM1O60784 492 aa29.64■■■□□ 2.34
C12orf43-209ENST00000546272 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
C12orf43-209ENST00000546272 CLTCQ00610 1675 aaKnown RBP29.61■■■□□ 2.33
C12orf43-209ENST00000546272 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
C12orf43-209ENST00000546272 LRRIQ1Q96JM4 1722 aa29.59■■■□□ 2.33
C12orf43-209ENST00000546272 PTPRKQ15262 1439 aa29.58■■■□□ 2.33
C12orf43-209ENST00000546272 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
C12orf43-209ENST00000546272 SAMD9LQ8IVG5 1584 aa29.57■■■□□ 2.32
C12orf43-209ENST00000546272 CPS1P31327 1500 aa29.56■■■□□ 2.32
C12orf43-209ENST00000546272 CDC42BPAQ5VT25 1732 aa29.52■■■□□ 2.32
C12orf43-209ENST00000546272 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
C12orf43-209ENST00000546272 SPAG9O60271 1321 aaKnown RBP29.5■■■□□ 2.31
C12orf43-209ENST00000546272 A2ML1A8K2U0 1454 aa29.48■■■□□ 2.31
C12orf43-209ENST00000546272 DNMT1P26358 1616 aaKnown RBP29.48■■■□□ 2.31
C12orf43-209ENST00000546272 UBTFP17480 764 aaKnown RBP29.47■■■□□ 2.31
C12orf43-209ENST00000546272 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
C12orf43-209ENST00000546272 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
C12orf43-209ENST00000546272 POLR1AO95602 1720 aaPredicted RBP29.47■■■□□ 2.31
C12orf43-209ENST00000546272 ATP7AQ04656 1500 aa29.45■■■□□ 2.3
C12orf43-209ENST00000546272 GGT6Q6P531 493 aa29.45■■■□□ 2.3
C12orf43-209ENST00000546272 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
C12orf43-209ENST00000546272 A2MP01023 1474 aa29.44■■■□□ 2.3
C12orf43-209ENST00000546272 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
C12orf43-209ENST00000546272 CCDC18Q5T9S5 1454 aa29.42■■■□□ 2.3
C12orf43-209ENST00000546272 NEURL4Q96JN8 1562 aa29.41■■■□□ 2.3
C12orf43-209ENST00000546272 INO80Q9ULG1 1556 aaPredicted RBP29.39■■■□□ 2.3
C12orf43-209ENST00000546272 HNRNPMP52272 730 aaKnown RBP eCLIP29.39■■■□□ 2.3
C12orf43-209ENST00000546272 EHMT2Q96KQ7 1210 aa29.37■■■□□ 2.29
C12orf43-209ENST00000546272 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
C12orf43-209ENST00000546272 VWDEQ8N2E2 1590 aa29.33■■■□□ 2.29
C12orf43-209ENST00000546272 KIAA1107Q9UPP5 1409 aa29.32■■■□□ 2.28
C12orf43-209ENST00000546272 CASKIN1Q8WXD9 1431 aa29.32■■■□□ 2.28
C12orf43-209ENST00000546272 GPATCH8Q9UKJ3 1502 aaKnown RBP29.31■■■□□ 2.28
C12orf43-209ENST00000546272 ADGBQ8N7X0 1667 aa29.31■■■□□ 2.28
C12orf43-209ENST00000546272 PLEKHH2Q8IVE3 1493 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms