RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
CCDC7-210ENST00000545067 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
CCDC7-210ENST00000545067 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
CCDC7-210ENST00000545067 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
CCDC7-210ENST00000545067 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
CCDC7-210ENST00000545067 NAIPQ13075 1403 aa11.61□□□□□ -0.55
CCDC7-210ENST00000545067 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
CCDC7-210ENST00000545067 HFM1A2PYH4 1435 aa11.59□□□□□ -0.55
CCDC7-210ENST00000545067 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC7-210ENST00000545067 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
CCDC7-210ENST00000545067 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
CCDC7-210ENST00000545067 CDK13Q14004 1512 aaKnown RBP11.57□□□□□ -0.56
CCDC7-210ENST00000545067 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
CCDC7-210ENST00000545067 ABCA10Q8WWZ4 1543 aa11.56□□□□□ -0.56
CCDC7-210ENST00000545067 NEUROD2Q15784 382 aa11.56□□□□□ -0.56
CCDC7-210ENST00000545067 USP47Q96K76 1375 aa11.56□□□□□ -0.56
CCDC7-210ENST00000545067 ROCK2O75116 1388 aaKnown RBP11.55□□□□□ -0.56
CCDC7-210ENST00000545067 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
CCDC7-210ENST00000545067 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
CCDC7-210ENST00000545067 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
CCDC7-210ENST00000545067 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
CCDC7-210ENST00000545067 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
CCDC7-210ENST00000545067 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
CCDC7-210ENST00000545067 EFCAB5A4FU69 1503 aa11.52□□□□□ -0.56
CCDC7-210ENST00000545067 PLIN1O60240 522 aa11.52□□□□□ -0.57
CCDC7-210ENST00000545067 CARMIL2Q6F5E8 1435 aa11.52□□□□□ -0.57
CCDC7-210ENST00000545067 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
CCDC7-210ENST00000545067 CNTLNQ9NXG0 1405 aa11.51□□□□□ -0.57
CCDC7-210ENST00000545067 ZBED9Q6R2W3 1325 aa11.51□□□□□ -0.57
CCDC7-210ENST00000545067 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
CCDC7-210ENST00000545067 RGS3P49796 1198 aa11.5□□□□□ -0.57
CCDC7-210ENST00000545067 RCAN3Q9UKA8 241 aa11.49□□□□□ -0.57
CCDC7-210ENST00000545067 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
CCDC7-210ENST00000545067 TMF1P82094 1093 aa11.48□□□□□ -0.57
CCDC7-210ENST00000545067 NBPF1Q3BBV0 1214 aa11.48□□□□□ -0.57
CCDC7-210ENST00000545067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC7-210ENST00000545067 EPRSP07814 1512 aaKnown RBP11.48□□□□□ -0.57
CCDC7-210ENST00000545067 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
CCDC7-210ENST00000545067 PANK3Q9H999 370 aa11.47□□□□□ -0.57
CCDC7-210ENST00000545067 AKNAQ7Z591 1439 aa11.46□□□□□ -0.58
CCDC7-210ENST00000545067 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.58
CCDC7-210ENST00000545067 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC7-210ENST00000545067 CCDC146Q8IYE0 955 aa11.45□□□□□ -0.58
CCDC7-210ENST00000545067 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
CCDC7-210ENST00000545067 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
CCDC7-210ENST00000545067 GRIN2BQ13224 1484 aa11.45□□□□□ -0.58
CCDC7-210ENST00000545067 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
CCDC7-210ENST00000545067 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
CCDC7-210ENST00000545067 DAPK1P53355 1430 aa11.44□□□□□ -0.58
CCDC7-210ENST00000545067 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC7-210ENST00000545067 RALBP1Q15311 655 aa11.44□□□□□ -0.58
CCDC7-210ENST00000545067 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
CCDC7-210ENST00000545067 ARXQ96QS3 562 aa11.44□□□□□ -0.58
CCDC7-210ENST00000545067 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-210ENST00000545067 PTPN23Q9H3S7 1636 aa11.43□□□□□ -0.58
CCDC7-210ENST00000545067 KIF15Q9NS87 1388 aa11.43□□□□□ -0.58
CCDC7-210ENST00000545067 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
CCDC7-210ENST00000545067 ERICH6BQ5W0A0 696 aa11.43□□□□□ -0.58
CCDC7-210ENST00000545067 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CCDC7-210ENST00000545067 ANKRD30BQ9BXX2 1392 aa11.43□□□□□ -0.58
CCDC7-210ENST00000545067 MSH5O43196 834 aa11.43□□□□□ -0.58
CCDC7-210ENST00000545067 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
CCDC7-210ENST00000545067 PTPRGP23470 1445 aa11.42□□□□□ -0.58
CCDC7-210ENST00000545067 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
CCDC7-210ENST00000545067 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
CCDC7-210ENST00000545067 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
CCDC7-210ENST00000545067 ABCC5O15440 1437 aa11.41□□□□□ -0.58
CCDC7-210ENST00000545067 GGT6Q6P531 493 aa11.41□□□□□ -0.58
CCDC7-210ENST00000545067 KIF3BO15066 747 aa11.41□□□□□ -0.58
CCDC7-210ENST00000545067 PLB1Q6P1J6 1458 aa11.41□□□□□ -0.58
CCDC7-210ENST00000545067 CCDC144AA2RUR9 1427 aa11.41□□□□□ -0.58
CCDC7-210ENST00000545067 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
CCDC7-210ENST00000545067 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
CCDC7-210ENST00000545067 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.58
CCDC7-210ENST00000545067 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
CCDC7-210ENST00000545067 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
CCDC7-210ENST00000545067 NEFMP07197 916 aa11.39□□□□□ -0.59
CCDC7-210ENST00000545067 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
CCDC7-210ENST00000545067 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
CCDC7-210ENST00000545067 SKAP1Q86WV1 359 aa11.38□□□□□ -0.59
CCDC7-210ENST00000545067 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
CCDC7-210ENST00000545067 CUL7Q14999 1698 aa11.38□□□□□ -0.59
CCDC7-210ENST00000545067 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
CCDC7-210ENST00000545067 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
CCDC7-210ENST00000545067 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
CCDC7-210ENST00000545067 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
CCDC7-210ENST00000545067 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
CCDC7-210ENST00000545067 AFAP1Q8N556 730 aa11.37□□□□□ -0.59
CCDC7-210ENST00000545067 TROQ12816 1431 aaPredicted RBP11.37□□□□□ -0.59
CCDC7-210ENST00000545067 KIAA1107Q9UPP5 1409 aa11.36□□□□□ -0.59
CCDC7-210ENST00000545067 CRBNQ96SW2 442 aa11.36□□□□□ -0.59
CCDC7-210ENST00000545067 HECW1Q76N89 1606 aa11.36□□□□□ -0.59
CCDC7-210ENST00000545067 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
CCDC7-210ENST00000545067 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
CCDC7-210ENST00000545067 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
CCDC7-210ENST00000545067 STK26Q9P289 416 aa11.35□□□□□ -0.59
CCDC7-210ENST00000545067 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
CCDC7-210ENST00000545067 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
CCDC7-210ENST00000545067 IPO9Q96P70 1041 aaKnown RBP11.34□□□□□ -0.59
CCDC7-210ENST00000545067 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms