RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
RDX-218ENST00000544551 FYCO1Q9BQS8 1478 aa19.95■□□□□ 0.78
RDX-218ENST00000544551 NAIPQ13075 1403 aa19.93■□□□□ 0.78
RDX-218ENST00000544551 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
RDX-218ENST00000544551 HFM1A2PYH4 1435 aa19.88■□□□□ 0.77
RDX-218ENST00000544551 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
RDX-218ENST00000544551 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
RDX-218ENST00000544551 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
RDX-218ENST00000544551 CCDC7Q96M83 1385 aa19.85■□□□□ 0.77
RDX-218ENST00000544551 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
RDX-218ENST00000544551 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
RDX-218ENST00000544551 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.76
RDX-218ENST00000544551 NEUROD2Q15784 382 aa19.83■□□□□ 0.76
RDX-218ENST00000544551 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
RDX-218ENST00000544551 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
RDX-218ENST00000544551 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
RDX-218ENST00000544551 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
RDX-218ENST00000544551 USP47Q96K76 1375 aa19.81■□□□□ 0.76
RDX-218ENST00000544551 ROCK2O75116 1388 aaKnown RBP19.79■□□□□ 0.76
RDX-218ENST00000544551 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
RDX-218ENST00000544551 PLIN1O60240 522 aa19.76■□□□□ 0.75
RDX-218ENST00000544551 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
RDX-218ENST00000544551 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
RDX-218ENST00000544551 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
RDX-218ENST00000544551 NUDCQ9Y266 331 aa19.74■□□□□ 0.75
RDX-218ENST00000544551 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
RDX-218ENST00000544551 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
RDX-218ENST00000544551 ZBED9Q6R2W3 1325 aa19.71■□□□□ 0.75
RDX-218ENST00000544551 CNTLNQ9NXG0 1405 aa19.71■□□□□ 0.75
RDX-218ENST00000544551 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
RDX-218ENST00000544551 EPRSP07814 1512 aaKnown RBP19.7■□□□□ 0.74
RDX-218ENST00000544551 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
RDX-218ENST00000544551 RGS3P49796 1198 aa19.68■□□□□ 0.74
RDX-218ENST00000544551 PANK3Q9H999 370 aa19.68■□□□□ 0.74
RDX-218ENST00000544551 TMF1P82094 1093 aa19.68■□□□□ 0.74
RDX-218ENST00000544551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.68■□□□□ 0.74
RDX-218ENST00000544551 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
RDX-218ENST00000544551 SAFB2Q14151 953 aaKnown RBP eCLIP19.67■□□□□ 0.74
RDX-218ENST00000544551 EXOC6Q8TAG9 804 aa19.66■□□□□ 0.74
RDX-218ENST00000544551 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
RDX-218ENST00000544551 ANKRD50Q9ULJ7 1429 aa19.65■□□□□ 0.74
RDX-218ENST00000544551 NOP58Q9Y2X3 529 aaKnown RBP19.65■□□□□ 0.74
RDX-218ENST00000544551 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
RDX-218ENST00000544551 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.74
RDX-218ENST00000544551 AKNAQ7Z591 1439 aa19.64■□□□□ 0.73
RDX-218ENST00000544551 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
RDX-218ENST00000544551 CDCA7LQ96GN5 454 aa19.64■□□□□ 0.73
RDX-218ENST00000544551 NPM1P06748 294 aaKnown RBP eCLIP19.63■□□□□ 0.73
RDX-218ENST00000544551 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
RDX-218ENST00000544551 PTPRGP23470 1445 aa19.62■□□□□ 0.73
RDX-218ENST00000544551 DAPK1P53355 1430 aa19.62■□□□□ 0.73
RDX-218ENST00000544551 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
RDX-218ENST00000544551 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
RDX-218ENST00000544551 KIF15Q9NS87 1388 aa19.62■□□□□ 0.73
RDX-218ENST00000544551 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
RDX-218ENST00000544551 GGT6Q6P531 493 aa19.61■□□□□ 0.73
RDX-218ENST00000544551 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
RDX-218ENST00000544551 KIF3BO15066 747 aa19.6■□□□□ 0.73
RDX-218ENST00000544551 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
RDX-218ENST00000544551 ABCC5O15440 1437 aa19.6■□□□□ 0.73
RDX-218ENST00000544551 FRAT1Q92837 279 aaPredicted RBP19.59■□□□□ 0.73
RDX-218ENST00000544551 RALBP1Q15311 655 aa19.59■□□□□ 0.73
RDX-218ENST00000544551 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
RDX-218ENST00000544551 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.73
RDX-218ENST00000544551 MSH5O43196 834 aa19.57■□□□□ 0.72
RDX-218ENST00000544551 EFCAB2Q5VUJ9 269 aa19.56■□□□□ 0.72
RDX-218ENST00000544551 ARXQ96QS3 562 aa19.56■□□□□ 0.72
RDX-218ENST00000544551 MYBBP1AQ9BQG0 1328 aaKnown RBP19.56■□□□□ 0.72
RDX-218ENST00000544551 MIA2Q96PC5 1412 aa19.56■□□□□ 0.72
RDX-218ENST00000544551 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
RDX-218ENST00000544551 CCDC144AA2RUR9 1427 aa19.55■□□□□ 0.72
RDX-218ENST00000544551 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
RDX-218ENST00000544551 AFAP1Q8N556 730 aa19.55■□□□□ 0.72
RDX-218ENST00000544551 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
RDX-218ENST00000544551 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
RDX-218ENST00000544551 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
RDX-218ENST00000544551 PPM1GO15355 546 aaPredicted RBP19.52■□□□□ 0.72
RDX-218ENST00000544551 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.52■□□□□ 0.71
RDX-218ENST00000544551 IQGAP2Q13576 1575 aa19.51■□□□□ 0.71
RDX-218ENST00000544551 DEKP35659 375 aaKnown RBP19.51■□□□□ 0.71
RDX-218ENST00000544551 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
RDX-218ENST00000544551 CUL7Q14999 1698 aa19.51■□□□□ 0.71
RDX-218ENST00000544551 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
RDX-218ENST00000544551 SPAG9O60271 1321 aaKnown RBP19.49■□□□□ 0.71
RDX-218ENST00000544551 RTN4Q9NQC3 1192 aaKnown RBP19.49■□□□□ 0.71
RDX-218ENST00000544551 STK26Q9P289 416 aa19.49■□□□□ 0.71
RDX-218ENST00000544551 KIAA1107Q9UPP5 1409 aa19.49■□□□□ 0.71
RDX-218ENST00000544551 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
RDX-218ENST00000544551 SLC4A3P48751 1232 aa19.48■□□□□ 0.71
RDX-218ENST00000544551 RRP7AQ9Y3A4 280 aaKnown RBP19.48■□□□□ 0.71
RDX-218ENST00000544551 PAK3O75914 559 aaPredicted RBP19.47■□□□□ 0.71
RDX-218ENST00000544551 NEFMP07197 916 aa19.47■□□□□ 0.71
RDX-218ENST00000544551 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
RDX-218ENST00000544551 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
RDX-218ENST00000544551 CRBNQ96SW2 442 aa19.47■□□□□ 0.71
RDX-218ENST00000544551 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
RDX-218ENST00000544551 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
RDX-218ENST00000544551 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
RDX-218ENST00000544551 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
RDX-218ENST00000544551 ADAMTS8Q9UP79 889 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms