RNA–Protein interactions for RNA: ENST00000544489.5

LRTM2-209, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 5

Gene LRTM2, Length 638 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-209ENST00000544489 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
LRTM2-209ENST00000544489 PREX1Q8TCU6 1659 aa26.79■■□□□ 1.88
LRTM2-209ENST00000544489 PLEKHD1A6NEE1 506 aa26.78■■□□□ 1.88
LRTM2-209ENST00000544489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.78■■□□□ 1.88
LRTM2-209ENST00000544489 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
LRTM2-209ENST00000544489 HECW1Q76N89 1606 aa26.77■■□□□ 1.88
LRTM2-209ENST00000544489 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
LRTM2-209ENST00000544489 ARHGEF12Q9NZN5 1544 aa26.76■■□□□ 1.87
LRTM2-209ENST00000544489 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
LRTM2-209ENST00000544489 ATP10AO60312 1499 aa26.68■■□□□ 1.86
LRTM2-209ENST00000544489 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
LRTM2-209ENST00000544489 C9orf84Q5VXU9 1444 aa26.65■■□□□ 1.86
LRTM2-209ENST00000544489 UHRF1BP1Q6BDS2 1440 aa26.65■■□□□ 1.86
LRTM2-209ENST00000544489 PTPRTO14522 1441 aa26.63■■□□□ 1.85
LRTM2-209ENST00000544489 SETD1BQ9UPS6 1966 aaKnown RBP26.62■■□□□ 1.85
LRTM2-209ENST00000544489 PLCH2O75038 1416 aa26.6■■□□□ 1.85
LRTM2-209ENST00000544489 LTBP4Q8N2S1 1624 aa26.6■■□□□ 1.85
LRTM2-209ENST00000544489 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
LRTM2-209ENST00000544489 IQSEC2Q5JU85 1478 aa26.55■■□□□ 1.84
LRTM2-209ENST00000544489 CDK13Q14004 1512 aaKnown RBP26.5■■□□□ 1.83
LRTM2-209ENST00000544489 EFCAB2Q5VUJ9 269 aa26.49■■□□□ 1.83
LRTM2-209ENST00000544489 C3P01024 1663 aa26.46■■□□□ 1.83
LRTM2-209ENST00000544489 ZNF518AQ6AHZ1 1483 aa26.45■■□□□ 1.82
LRTM2-209ENST00000544489 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
LRTM2-209ENST00000544489 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
LRTM2-209ENST00000544489 KDM5CP41229 1560 aa26.44■■□□□ 1.82
LRTM2-209ENST00000544489 AFAP1Q8N556 730 aa26.43■■□□□ 1.82
LRTM2-209ENST00000544489 MYO5CQ9NQX4 1742 aa26.42■■□□□ 1.82
LRTM2-209ENST00000544489 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
LRTM2-209ENST00000544489 TRAPPC8Q9Y2L5 1435 aa26.41■■□□□ 1.82
LRTM2-209ENST00000544489 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
LRTM2-209ENST00000544489 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
LRTM2-209ENST00000544489 MYT1LQ9UL68 1186 aa26.35■■□□□ 1.81
LRTM2-209ENST00000544489 ABCA6Q8N139 1617 aa26.35■■□□□ 1.81
LRTM2-209ENST00000544489 UBAP1LF5GYI3 381 aa26.34■■□□□ 1.81
LRTM2-209ENST00000544489 ESF1Q9H501 851 aaKnown RBP26.33■■□□□ 1.81
LRTM2-209ENST00000544489 AGLP35573 1532 aa26.33■■□□□ 1.81
LRTM2-209ENST00000544489 KIF14Q15058 1648 aa26.32■■□□□ 1.8
LRTM2-209ENST00000544489 MLH3Q9UHC1 1453 aa26.31■■□□□ 1.8
LRTM2-209ENST00000544489 ARHGAP5Q13017 1502 aa26.31■■□□□ 1.8
LRTM2-209ENST00000544489 CAMSAP1Q5T5Y3 1602 aa26.31■■□□□ 1.8
LRTM2-209ENST00000544489 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
LRTM2-209ENST00000544489 CNTLNQ9NXG0 1405 aa26.27■■□□□ 1.8
LRTM2-209ENST00000544489 NCKAP5LQ9HCH0 1330 aa26.26■■□□□ 1.79
LRTM2-209ENST00000544489 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
LRTM2-209ENST00000544489 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
LRTM2-209ENST00000544489 NPATQ14207 1427 aa26.23■■□□□ 1.79
LRTM2-209ENST00000544489 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
LRTM2-209ENST00000544489 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
LRTM2-209ENST00000544489 FMN1Q68DA7 1419 aa26.18■■□□□ 1.78
LRTM2-209ENST00000544489 MED1Q15648 1581 aaPredicted RBP26.16■■□□□ 1.78
LRTM2-209ENST00000544489 MROH2AA6NES4 1674 aa26.16■■□□□ 1.78
LRTM2-209ENST00000544489 KIDINS220Q9ULH0 1771 aa26.16■■□□□ 1.78
LRTM2-209ENST00000544489 ABCC1P33527 1531 aa26.16■■□□□ 1.78
LRTM2-209ENST00000544489 PKD2Q13563 968 aa26.15■■□□□ 1.78
LRTM2-209ENST00000544489 ZMYM3Q14202 1370 aa26.15■■□□□ 1.78
LRTM2-209ENST00000544489 CLIP1P30622 1438 aa26.14■■□□□ 1.78
LRTM2-209ENST00000544489 PLA2R1Q13018 1463 aa26.14■■□□□ 1.78
LRTM2-209ENST00000544489 ITSN2Q9NZM3 1697 aa26.13■■□□□ 1.77
LRTM2-209ENST00000544489 TCOF1Q13428 1488 aaKnown RBP26.13■■□□□ 1.77
LRTM2-209ENST00000544489 HSPA1LP34931 641 aa26.13■■□□□ 1.77
LRTM2-209ENST00000544489 ARHGAP35Q9NRY4 1499 aa26.12■■□□□ 1.77
LRTM2-209ENST00000544489 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
LRTM2-209ENST00000544489 PREX2Q70Z35 1606 aa26.1■■□□□ 1.77
LRTM2-209ENST00000544489 MYO3AQ8NEV4 1616 aa26.08■■□□□ 1.77
LRTM2-209ENST00000544489 CEP170BQ9Y4F5 1589 aaPredicted RBP26.07■■□□□ 1.76
LRTM2-209ENST00000544489 LRRIQ1Q96JM4 1722 aa26.06■■□□□ 1.76
LRTM2-209ENST00000544489 PPP6R1Q9UPN7 881 aa26.06■■□□□ 1.76
LRTM2-209ENST00000544489 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
LRTM2-209ENST00000544489 PIP4K2BP78356 416 aa26.04■■□□□ 1.76
LRTM2-209ENST00000544489 PTPRKQ15262 1439 aa26.04■■□□□ 1.76
LRTM2-209ENST00000544489 SUPT6HQ7KZ85 1726 aaKnown RBP26.03■■□□□ 1.76
LRTM2-209ENST00000544489 SAMD9LQ8IVG5 1584 aa26.02■■□□□ 1.76
LRTM2-209ENST00000544489 CLTCQ00610 1675 aaKnown RBP26.02■■□□□ 1.76
LRTM2-209ENST00000544489 TOM1O60784 492 aa25.99■■□□□ 1.75
LRTM2-209ENST00000544489 CDC42BPAQ5VT25 1732 aa25.96■■□□□ 1.75
LRTM2-209ENST00000544489 SPAG9O60271 1321 aaKnown RBP25.95■■□□□ 1.75
LRTM2-209ENST00000544489 CPS1P31327 1500 aa25.94■■□□□ 1.74
LRTM2-209ENST00000544489 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
LRTM2-209ENST00000544489 PLXNC1O60486 1568 aa25.93■■□□□ 1.74
LRTM2-209ENST00000544489 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
LRTM2-209ENST00000544489 SYCP2Q9BX26 1530 aa25.91■■□□□ 1.74
LRTM2-209ENST00000544489 DNMT1P26358 1616 aaKnown RBP25.91■■□□□ 1.74
LRTM2-209ENST00000544489 SHANK2Q9UPX8 1470 aa25.91■■□□□ 1.74
LRTM2-209ENST00000544489 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
LRTM2-209ENST00000544489 ATP7AQ04656 1500 aa25.89■■□□□ 1.74
LRTM2-209ENST00000544489 LOC105371045A0A1W2PR82 267 aa25.89■■□□□ 1.74
LRTM2-209ENST00000544489 GGT6Q6P531 493 aa25.89■■□□□ 1.74
LRTM2-209ENST00000544489 A2MP01023 1474 aa25.89■■□□□ 1.73
LRTM2-209ENST00000544489 NEURL4Q96JN8 1562 aa25.88■■□□□ 1.73
LRTM2-209ENST00000544489 HNRNPMP52272 730 aaKnown RBP eCLIP25.88■■□□□ 1.73
LRTM2-209ENST00000544489 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
LRTM2-209ENST00000544489 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
LRTM2-209ENST00000544489 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
LRTM2-209ENST00000544489 POLR1AO95602 1720 aaPredicted RBP25.85■■□□□ 1.73
LRTM2-209ENST00000544489 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
LRTM2-209ENST00000544489 GPATCH8Q9UKJ3 1502 aaKnown RBP25.82■■□□□ 1.72
LRTM2-209ENST00000544489 VWDEQ8N2E2 1590 aa25.8■■□□□ 1.72
LRTM2-209ENST00000544489 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
LRTM2-209ENST00000544489 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms