RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
TCF4-209ENST00000544241 IGF1RP08069 1367 aa13.68□□□□□ -0.22
TCF4-209ENST00000544241 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
TCF4-209ENST00000544241 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
TCF4-209ENST00000544241 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
TCF4-209ENST00000544241 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
TCF4-209ENST00000544241 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
TCF4-209ENST00000544241 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
TCF4-209ENST00000544241 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
TCF4-209ENST00000544241 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
TCF4-209ENST00000544241 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
TCF4-209ENST00000544241 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
TCF4-209ENST00000544241 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
TCF4-209ENST00000544241 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
TCF4-209ENST00000544241 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
TCF4-209ENST00000544241 PTPRKQ15262 1439 aa13.62□□□□□ -0.23
TCF4-209ENST00000544241 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
TCF4-209ENST00000544241 SPATA31E1Q6ZUB1 1445 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
TCF4-209ENST00000544241 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
TCF4-209ENST00000544241 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
TCF4-209ENST00000544241 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
TCF4-209ENST00000544241 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
TCF4-209ENST00000544241 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.23
TCF4-209ENST00000544241 GCC2Q8IWJ2 1684 aa13.58□□□□□ -0.24
TCF4-209ENST00000544241 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
TCF4-209ENST00000544241 L1TD1Q5T7N2 865 aaKnown RBP13.57□□□□□ -0.24
TCF4-209ENST00000544241 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
TCF4-209ENST00000544241 RPRD2Q5VT52 1461 aaKnown RBP13.56□□□□□ -0.24
TCF4-209ENST00000544241 MPHOSPH9Q99550 1183 aa13.56□□□□□ -0.24
TCF4-209ENST00000544241 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
TCF4-209ENST00000544241 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
TCF4-209ENST00000544241 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
TCF4-209ENST00000544241 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
TCF4-209ENST00000544241 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
TCF4-209ENST00000544241 RRP9O43818 475 aaKnown RBP13.53□□□□□ -0.24
TCF4-209ENST00000544241 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.24
TCF4-209ENST00000544241 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.24
TCF4-209ENST00000544241 KIF15Q9NS87 1388 aa13.52□□□□□ -0.24
TCF4-209ENST00000544241 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.24
TCF4-209ENST00000544241 RALBP1Q15311 655 aa13.52□□□□□ -0.25
TCF4-209ENST00000544241 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
TCF4-209ENST00000544241 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
TCF4-209ENST00000544241 MYBBP1AQ9BQG0 1328 aaKnown RBP13.5□□□□□ -0.25
TCF4-209ENST00000544241 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
TCF4-209ENST00000544241 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
TCF4-209ENST00000544241 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
TCF4-209ENST00000544241 FRAT2O75474 233 aaPredicted RBP13.49□□□□□ -0.25
TCF4-209ENST00000544241 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
TCF4-209ENST00000544241 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
TCF4-209ENST00000544241 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
TCF4-209ENST00000544241 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
TCF4-209ENST00000544241 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
TCF4-209ENST00000544241 HSP90AA1P07900 732 aaKnown RBP13.48□□□□□ -0.25
TCF4-209ENST00000544241 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
TCF4-209ENST00000544241 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
TCF4-209ENST00000544241 ZMYND15Q9H091 742 aa13.47□□□□□ -0.25
TCF4-209ENST00000544241 INSRP06213 1382 aa13.46□□□□□ -0.25
TCF4-209ENST00000544241 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
TCF4-209ENST00000544241 USP47Q96K76 1375 aa13.46□□□□□ -0.25
TCF4-209ENST00000544241 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.26
TCF4-209ENST00000544241 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.26
TCF4-209ENST00000544241 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
TCF4-209ENST00000544241 BECN1Q14457 450 aa13.44□□□□□ -0.26
TCF4-209ENST00000544241 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
TCF4-209ENST00000544241 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
TCF4-209ENST00000544241 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
TCF4-209ENST00000544241 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
TCF4-209ENST00000544241 POLR3GLQ9BT43 218 aa13.43□□□□□ -0.26
TCF4-209ENST00000544241 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
TCF4-209ENST00000544241 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 CLCN1P35523 988 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 CHIC2Q9UKJ5 165 aa13.42□□□□□ -0.26
TCF4-209ENST00000544241 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
TCF4-209ENST00000544241 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
TCF4-209ENST00000544241 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
TCF4-209ENST00000544241 CUL7Q14999 1698 aa13.41□□□□□ -0.26
TCF4-209ENST00000544241 CNGB1Q14028 1251 aaPredicted RBP13.41□□□□□ -0.26
TCF4-209ENST00000544241 CRBNQ96SW2 442 aa13.41□□□□□ -0.26
TCF4-209ENST00000544241 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
TCF4-209ENST00000544241 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
TCF4-209ENST00000544241 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
TCF4-209ENST00000544241 KIF14Q15058 1648 aa13.39□□□□□ -0.27
TCF4-209ENST00000544241 KDM5CP41229 1560 aa13.38□□□□□ -0.27
TCF4-209ENST00000544241 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
TCF4-209ENST00000544241 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
TCF4-209ENST00000544241 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
TCF4-209ENST00000544241 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
TCF4-209ENST00000544241 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
TCF4-209ENST00000544241 KDM6BO15054 1643 aa13.36□□□□□ -0.27
TCF4-209ENST00000544241 FOXD1Q16676 465 aa13.36□□□□□ -0.27
TCF4-209ENST00000544241 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
TCF4-209ENST00000544241 POGKQ9P215 609 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms