RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 PKD2Q13563 968 aa17.19■□□□□ 0.34
TUBGCP2-210ENST00000543663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
TUBGCP2-210ENST00000543663 RGS3P49796 1198 aa17.17■□□□□ 0.34
TUBGCP2-210ENST00000543663 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
TUBGCP2-210ENST00000543663 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.347e-7■■■■■ 36
TUBGCP2-210ENST00000543663 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
TUBGCP2-210ENST00000543663 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
TUBGCP2-210ENST00000543663 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
TUBGCP2-210ENST00000543663 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
TUBGCP2-210ENST00000543663 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
TUBGCP2-210ENST00000543663 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
TUBGCP2-210ENST00000543663 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
TUBGCP2-210ENST00000543663 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
TUBGCP2-210ENST00000543663 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
TUBGCP2-210ENST00000543663 PCF11O94913 1555 aaKnown RBP17.12■□□□□ 0.33
TUBGCP2-210ENST00000543663 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
TUBGCP2-210ENST00000543663 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TUBGCP2-210ENST00000543663 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP2-210ENST00000543663 MYOM3Q5VTT5 1437 aa17.09■□□□□ 0.33
TUBGCP2-210ENST00000543663 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
TUBGCP2-210ENST00000543663 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUBGCP2-210ENST00000543663 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
TUBGCP2-210ENST00000543663 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
TUBGCP2-210ENST00000543663 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
TUBGCP2-210ENST00000543663 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
TUBGCP2-210ENST00000543663 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
TUBGCP2-210ENST00000543663 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
TUBGCP2-210ENST00000543663 NUP155O75694 1391 aa17.02■□□□□ 0.32
TUBGCP2-210ENST00000543663 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.31
TUBGCP2-210ENST00000543663 TPRNQ4KMQ1 711 aa17.02■□□□□ 0.31
TUBGCP2-210ENST00000543663 HECW1Q76N89 1606 aa17.01■□□□□ 0.31
TUBGCP2-210ENST00000543663 IQGAP2Q13576 1575 aa17■□□□□ 0.31
TUBGCP2-210ENST00000543663 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
TUBGCP2-210ENST00000543663 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
TUBGCP2-210ENST00000543663 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
TUBGCP2-210ENST00000543663 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
TUBGCP2-210ENST00000543663 KIAA0586Q9BVV6 1533 aa16.98■□□□□ 0.31
TUBGCP2-210ENST00000543663 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
TUBGCP2-210ENST00000543663 SUPT6HQ7KZ85 1726 aaKnown RBP16.97■□□□□ 0.31
TUBGCP2-210ENST00000543663 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
TUBGCP2-210ENST00000543663 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
TUBGCP2-210ENST00000543663 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
TUBGCP2-210ENST00000543663 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
TUBGCP2-210ENST00000543663 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
TUBGCP2-210ENST00000543663 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
TUBGCP2-210ENST00000543663 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
TUBGCP2-210ENST00000543663 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
TUBGCP2-210ENST00000543663 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
TUBGCP2-210ENST00000543663 GGT6Q6P531 493 aa16.91■□□□□ 0.3
TUBGCP2-210ENST00000543663 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
TUBGCP2-210ENST00000543663 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.3
TUBGCP2-210ENST00000543663 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
TUBGCP2-210ENST00000543663 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
TUBGCP2-210ENST00000543663 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
TUBGCP2-210ENST00000543663 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
TUBGCP2-210ENST00000543663 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
TUBGCP2-210ENST00000543663 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
TUBGCP2-210ENST00000543663 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
TUBGCP2-210ENST00000543663 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
TUBGCP2-210ENST00000543663 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
TUBGCP2-210ENST00000543663 ANKRD30AQ9BXX3 1397 aa16.86■□□□□ 0.29
TUBGCP2-210ENST00000543663 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
TUBGCP2-210ENST00000543663 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
TUBGCP2-210ENST00000543663 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
TUBGCP2-210ENST00000543663 MLECQ14165 292 aa16.84■□□□□ 0.29
TUBGCP2-210ENST00000543663 BECN1Q14457 450 aa16.84■□□□□ 0.29
TUBGCP2-210ENST00000543663 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.29
TUBGCP2-210ENST00000543663 SYNJ2O15056 1496 aa16.83■□□□□ 0.29
TUBGCP2-210ENST00000543663 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.28
TUBGCP2-210ENST00000543663 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
TUBGCP2-210ENST00000543663 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
TUBGCP2-210ENST00000543663 KIF3BO15066 747 aa16.82■□□□□ 0.28
TUBGCP2-210ENST00000543663 WDR62O43379 1518 aa16.82■□□□□ 0.28
TUBGCP2-210ENST00000543663 NAIPQ13075 1403 aa16.82■□□□□ 0.28
TUBGCP2-210ENST00000543663 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
TUBGCP2-210ENST00000543663 CDK13Q14004 1512 aaKnown RBP16.81■□□□□ 0.28
TUBGCP2-210ENST00000543663 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
TUBGCP2-210ENST00000543663 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
TUBGCP2-210ENST00000543663 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
TUBGCP2-210ENST00000543663 PTPRGP23470 1445 aa16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
TUBGCP2-210ENST00000543663 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
TUBGCP2-210ENST00000543663 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
TUBGCP2-210ENST00000543663 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP2-210ENST00000543663 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP2-210ENST00000543663 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
TUBGCP2-210ENST00000543663 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
TUBGCP2-210ENST00000543663 PLIN1O60240 522 aa16.78■□□□□ 0.28
TUBGCP2-210ENST00000543663 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
TUBGCP2-210ENST00000543663 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
TUBGCP2-210ENST00000543663 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.27
TUBGCP2-210ENST00000543663 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.27
TUBGCP2-210ENST00000543663 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
TUBGCP2-210ENST00000543663 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
TUBGCP2-210ENST00000543663 STK26Q9P289 416 aa16.76■□□□□ 0.27
TUBGCP2-210ENST00000543663 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms