RNA–Protein interactions for RNA: ENST00000543610.5

CCDC189-206, Transcript of coiled-coil domain containing 189, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC189, Length 1,967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-206ENST00000543610 ROCK1Q13464 1354 aa30.54■■■□□ 2.48
CCDC189-206ENST00000543610 PTPRGP23470 1445 aa30.52■■■□□ 2.48
CCDC189-206ENST00000543610 CFDP1Q9UEE9 299 aaPredicted RBP30.5■■■□□ 2.47
CCDC189-206ENST00000543610 DENND4BO75064 1496 aaPredicted RBP30.49■■■□□ 2.47
CCDC189-206ENST00000543610 CDC42BPAQ5VT25 1732 aa30.48■■■□□ 2.47
CCDC189-206ENST00000543610 PLEKHD1A6NEE1 506 aa30.47■■■□□ 2.47
CCDC189-206ENST00000543610 PPP1R15AO75807 674 aaPredicted RBP30.47■■■□□ 2.47
CCDC189-206ENST00000543610 TONSLQ96HA7 1378 aa30.47■■■□□ 2.47
CCDC189-206ENST00000543610 TRIM52Q96A61 297 aa30.45■■■□□ 2.47
CCDC189-206ENST00000543610 ABCC10Q5T3U5 1492 aa30.44■■■□□ 2.46
CCDC189-206ENST00000543610 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
CCDC189-206ENST00000543610 CROCC2H7BZ55 1655 aa30.44■■■□□ 2.46
CCDC189-206ENST00000543610 ADGBQ8N7X0 1667 aa30.43■■■□□ 2.46
CCDC189-206ENST00000543610 CENPBP07199 599 aaPredicted RBP30.43■■■□□ 2.46
CCDC189-206ENST00000543610 ZNF777Q9ULD5 760 aaPredicted RBP30.39■■■□□ 2.46
CCDC189-206ENST00000543610 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
CCDC189-206ENST00000543610 SCAF1Q9H7N4 1312 aaKnown RBP30.37■■■□□ 2.45
CCDC189-206ENST00000543610 MPHOSPH9Q99550 1183 aa30.36■■■□□ 2.45
CCDC189-206ENST00000543610 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
CCDC189-206ENST00000543610 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
CCDC189-206ENST00000543610 YTHDC1Q96MU7 727 aaKnown RBP30.32■■■□□ 2.44
CCDC189-206ENST00000543610 NCOA1Q15788 1441 aa30.31■■■□□ 2.44
CCDC189-206ENST00000543610 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
CCDC189-206ENST00000543610 ABCC2Q92887 1545 aa30.25■■■□□ 2.43
CCDC189-206ENST00000543610 PREX2Q70Z35 1606 aa30.23■■■□□ 2.43
CCDC189-206ENST00000543610 CDC42BPBQ9Y5S2 1711 aa30.23■■■□□ 2.43
CCDC189-206ENST00000543610 SHANK2Q9UPX8 1470 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 FOXD1Q16676 465 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 ANKRD30AQ9BXX3 1397 aa30.22■■■□□ 2.43
CCDC189-206ENST00000543610 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CCDC189-206ENST00000543610 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
CCDC189-206ENST00000543610 C9orf84Q5VXU9 1444 aa30.17■■■□□ 2.42
CCDC189-206ENST00000543610 PZPP20742 1482 aa30.17■■■□□ 2.42
CCDC189-206ENST00000543610 HIRIP3Q9BW71 556 aaPredicted RBP30.17■■■□□ 2.42
CCDC189-206ENST00000543610 ARHGEF5Q12774 1597 aa30.16■■■□□ 2.42
CCDC189-206ENST00000543610 SAMD9LQ8IVG5 1584 aa30.16■■■□□ 2.42
CCDC189-206ENST00000543610 SLC4A1APQ9BWU0 796 aaKnown RBP30.16■■■□□ 2.42
CCDC189-206ENST00000543610 TTC37Q6PGP7 1564 aa30.15■■■□□ 2.42
CCDC189-206ENST00000543610 ANKRD50Q9ULJ7 1429 aa30.12■■■□□ 2.41
CCDC189-206ENST00000543610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
CCDC189-206ENST00000543610 RPRD2Q5VT52 1461 aaKnown RBP30.12■■■□□ 2.41
CCDC189-206ENST00000543610 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
CCDC189-206ENST00000543610 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
CCDC189-206ENST00000543610 HNRNPMP52272 730 aaKnown RBP eCLIP30.08■■■□□ 2.41
CCDC189-206ENST00000543610 ZCCHC11Q5TAX3 1644 aaKnown RBP30.08■■■□□ 2.41
CCDC189-206ENST00000543610 TSPY4P0CV99 314 aa30.07■■■□□ 2.4
CCDC189-206ENST00000543610 TSPY10P0CW01 314 aa30.07■■■□□ 2.4
CCDC189-206ENST00000543610 MYO5CQ9NQX4 1742 aa30.06■■■□□ 2.4
CCDC189-206ENST00000543610 CCDC141Q6ZP82 1450 aa30.06■■■□□ 2.4
CCDC189-206ENST00000543610 L3MBTL2Q969R5 705 aa30.05■■■□□ 2.4
CCDC189-206ENST00000543610 UHRF1BP1LA0JNW5 1464 aa30.05■■■□□ 2.4
CCDC189-206ENST00000543610 ARHGAP5Q13017 1502 aa30.04■■■□□ 2.4
CCDC189-206ENST00000543610 TEX14Q8IWB6 1497 aa30.04■■■□□ 2.4
CCDC189-206ENST00000543610 SYCP2Q9BX26 1530 aa30.01■■■□□ 2.39
CCDC189-206ENST00000543610 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.39
CCDC189-206ENST00000543610 KIF15Q9NS87 1388 aa30■■■□□ 2.39
CCDC189-206ENST00000543610 GTF3C3Q9Y5Q9 886 aa30■■■□□ 2.39
CCDC189-206ENST00000543610 KDM5DQ9BY66 1539 aa29.96■■■□□ 2.39
CCDC189-206ENST00000543610 RSPH4AQ5TD94 716 aa29.95■■■□□ 2.39
CCDC189-206ENST00000543610 PKD2Q13563 968 aa29.94■■■□□ 2.38
CCDC189-206ENST00000543610 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
CCDC189-206ENST00000543610 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
CCDC189-206ENST00000543610 NUP155O75694 1391 aa29.93■■■□□ 2.38
CCDC189-206ENST00000543610 PLEKHH2Q8IVE3 1493 aa29.89■■■□□ 2.38
CCDC189-206ENST00000543610 HSPA5P11021 654 aaKnown RBP29.88■■■□□ 2.37
CCDC189-206ENST00000543610 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
CCDC189-206ENST00000543610 PLCH2O75038 1416 aa29.86■■■□□ 2.37
CCDC189-206ENST00000543610 EIF4G2P78344 907 aaKnown RBP eCLIP29.84■■■□□ 2.37
CCDC189-206ENST00000543610 PLXNC1O60486 1568 aa29.83■■■□□ 2.37
CCDC189-206ENST00000543610 ARHGEF12Q9NZN5 1544 aa29.83■■■□□ 2.37
CCDC189-206ENST00000543610 ABCC1P33527 1531 aa29.78■■■□□ 2.36
CCDC189-206ENST00000543610 FAM135AQ9P2D6 1515 aa29.78■■■□□ 2.36
CCDC189-206ENST00000543610 UNC13BO14795 1591 aa29.77■■■□□ 2.36
CCDC189-206ENST00000543610 WASHC2AQ641Q2 1341 aa29.76■■■□□ 2.35
CCDC189-206ENST00000543610 ANP32CO43423 234 aa29.76■■■□□ 2.35
CCDC189-206ENST00000543610 EFCAB2Q5VUJ9 269 aa29.75■■■□□ 2.35
CCDC189-206ENST00000543610 WDR7Q9Y4E6 1490 aa29.72■■■□□ 2.35
CCDC189-206ENST00000543610 ARAP3Q8WWN8 1544 aa29.71■■■□□ 2.35
CCDC189-206ENST00000543610 DUOX2Q9NRD8 1548 aa29.7■■■□□ 2.34
CCDC189-206ENST00000543610 SPATA31E1Q6ZUB1 1445 aa29.68■■■□□ 2.34
CCDC189-206ENST00000543610 CCER2I3L3R5 266 aa29.68■■■□□ 2.34
CCDC189-206ENST00000543610 TRAPPC8Q9Y2L5 1435 aa29.67■■■□□ 2.34
CCDC189-206ENST00000543610 POLR1AO95602 1720 aaPredicted RBP29.66■■■□□ 2.34
CCDC189-206ENST00000543610 IQGAP3Q86VI3 1631 aa29.65■■■□□ 2.34
CCDC189-206ENST00000543610 ERBINQ96RT1 1412 aa29.63■■■□□ 2.33
CCDC189-206ENST00000543610 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
CCDC189-206ENST00000543610 C11orf95C9JLR9 678 aaPredicted RBP29.62■■■□□ 2.33
CCDC189-206ENST00000543610 UHRF1BP1Q6BDS2 1440 aa29.61■■■□□ 2.33
CCDC189-206ENST00000543610 CCDC7Q96M83 1385 aa29.61■■■□□ 2.33
CCDC189-206ENST00000543610 ZNF326Q5BKZ1 582 aaKnown RBP29.61■■■□□ 2.33
CCDC189-206ENST00000543610 MAGI2Q86UL8 1455 aa29.6■■■□□ 2.33
CCDC189-206ENST00000543610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.59■■■□□ 2.33
CCDC189-206ENST00000543610 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
CCDC189-206ENST00000543610 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
CCDC189-206ENST00000543610 ZFYVE16Q7Z3T8 1539 aa29.56■■■□□ 2.32
CCDC189-206ENST00000543610 ASXL2Q76L83 1435 aa29.56■■■□□ 2.32
CCDC189-206ENST00000543610 RALGAPBQ86X10 1494 aa29.55■■■□□ 2.32
CCDC189-206ENST00000543610 KDM5CP41229 1560 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms