RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
MSH2-206ENST00000543555 ROCK1Q13464 1354 aa19.92■□□□□ 0.78
MSH2-206ENST00000543555 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
MSH2-206ENST00000543555 ABCC5O15440 1437 aa19.91■□□□□ 0.78
MSH2-206ENST00000543555 DENND4BO75064 1496 aaPredicted RBP19.9■□□□□ 0.78
MSH2-206ENST00000543555 ADCY10Q96PN6 1610 aa19.9■□□□□ 0.78
MSH2-206ENST00000543555 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.77
MSH2-206ENST00000543555 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
MSH2-206ENST00000543555 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
MSH2-206ENST00000543555 ITSN2Q9NZM3 1697 aa19.88■□□□□ 0.77
MSH2-206ENST00000543555 ABCA8O94911 1581 aa19.88■□□□□ 0.77
MSH2-206ENST00000543555 KIF14Q15058 1648 aa19.86■□□□□ 0.77
MSH2-206ENST00000543555 GPATCH8Q9UKJ3 1502 aaKnown RBP19.85■□□□□ 0.77
MSH2-206ENST00000543555 CAMSAP2Q08AD1 1489 aa19.85■□□□□ 0.77
MSH2-206ENST00000543555 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
MSH2-206ENST00000543555 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
MSH2-206ENST00000543555 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.76
MSH2-206ENST00000543555 CFDP1Q9UEE9 299 aaPredicted RBP19.83■□□□□ 0.76
MSH2-206ENST00000543555 ATP10BO94823 1461 aa19.8■□□□□ 0.76
MSH2-206ENST00000543555 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
MSH2-206ENST00000543555 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
MSH2-206ENST00000543555 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.76
MSH2-206ENST00000543555 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
MSH2-206ENST00000543555 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
MSH2-206ENST00000543555 CROCC2H7BZ55 1655 aa19.74■□□□□ 0.75
MSH2-206ENST00000543555 ADGRL2O95490 1459 aa19.74■□□□□ 0.75
MSH2-206ENST00000543555 NCOA1Q15788 1441 aa19.74■□□□□ 0.75
MSH2-206ENST00000543555 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
MSH2-206ENST00000543555 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
MSH2-206ENST00000543555 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
MSH2-206ENST00000543555 FOXD1Q16676 465 aa19.71■□□□□ 0.75
MSH2-206ENST00000543555 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
MSH2-206ENST00000543555 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
MSH2-206ENST00000543555 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
MSH2-206ENST00000543555 PZPP20742 1482 aa19.67■□□□□ 0.74
MSH2-206ENST00000543555 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
MSH2-206ENST00000543555 SHANK2Q9UPX8 1470 aa19.66■□□□□ 0.74
MSH2-206ENST00000543555 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
MSH2-206ENST00000543555 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
MSH2-206ENST00000543555 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
MSH2-206ENST00000543555 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
MSH2-206ENST00000543555 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
MSH2-206ENST00000543555 TEX14Q8IWB6 1497 aa19.62■□□□□ 0.73
MSH2-206ENST00000543555 C9orf84Q5VXU9 1444 aa19.62■□□□□ 0.73
MSH2-206ENST00000543555 ANKRD50Q9ULJ7 1429 aa19.61■□□□□ 0.73
MSH2-206ENST00000543555 ANP32CO43423 234 aa19.6■□□□□ 0.73
MSH2-206ENST00000543555 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
MSH2-206ENST00000543555 ARHGEF5Q12774 1597 aa19.59■□□□□ 0.73
MSH2-206ENST00000543555 CCER2I3L3R5 266 aa19.58■□□□□ 0.72
MSH2-206ENST00000543555 KIAA1107Q9UPP5 1409 aa19.58■□□□□ 0.72
MSH2-206ENST00000543555 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
MSH2-206ENST00000543555 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
MSH2-206ENST00000543555 ZCCHC11Q5TAX3 1644 aaKnown RBP19.57■□□□□ 0.72
MSH2-206ENST00000543555 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
MSH2-206ENST00000543555 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
MSH2-206ENST00000543555 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
MSH2-206ENST00000543555 SAMD9LQ8IVG5 1584 aa19.55■□□□□ 0.72
MSH2-206ENST00000543555 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
MSH2-206ENST00000543555 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.72
MSH2-206ENST00000543555 NBPF8Q3BBV2 869 aa19.53■□□□□ 0.72
MSH2-206ENST00000543555 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
MSH2-206ENST00000543555 PKD2Q13563 968 aa19.52■□□□□ 0.72
MSH2-206ENST00000543555 CCDC141Q6ZP82 1450 aa19.52■□□□□ 0.72
MSH2-206ENST00000543555 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
MSH2-206ENST00000543555 UHRF1BP1LA0JNW5 1464 aa19.52■□□□□ 0.71
MSH2-206ENST00000543555 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
MSH2-206ENST00000543555 KIF15Q9NS87 1388 aa19.51■□□□□ 0.71
MSH2-206ENST00000543555 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
MSH2-206ENST00000543555 NUP155O75694 1391 aa19.49■□□□□ 0.71
MSH2-206ENST00000543555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.712e-10■■□□□ 13.9
MSH2-206ENST00000543555 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
MSH2-206ENST00000543555 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
MSH2-206ENST00000543555 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
MSH2-206ENST00000543555 SYCP2Q9BX26 1530 aa19.45■□□□□ 0.7
MSH2-206ENST00000543555 SPATA31E1Q6ZUB1 1445 aa19.44■□□□□ 0.7
MSH2-206ENST00000543555 WDR7Q9Y4E6 1490 aa19.43■□□□□ 0.7
MSH2-206ENST00000543555 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
MSH2-206ENST00000543555 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
MSH2-206ENST00000543555 MYO5CQ9NQX4 1742 aa19.43■□□□□ 0.7
MSH2-206ENST00000543555 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
MSH2-206ENST00000543555 C11orf95C9JLR9 678 aaPredicted RBP19.41■□□□□ 0.7
MSH2-206ENST00000543555 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
MSH2-206ENST00000543555 PLEKHH2Q8IVE3 1493 aa19.4■□□□□ 0.7
MSH2-206ENST00000543555 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
MSH2-206ENST00000543555 SUPT16HQ9Y5B9 1047 aaKnown RBP19.38■□□□□ 0.69
MSH2-206ENST00000543555 POLR1AO95602 1720 aaPredicted RBP19.37■□□□□ 0.69
MSH2-206ENST00000543555 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
MSH2-206ENST00000543555 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
MSH2-206ENST00000543555 UHRF1BP1Q6BDS2 1440 aa19.36■□□□□ 0.69
MSH2-206ENST00000543555 PLXNC1O60486 1568 aa19.35■□□□□ 0.69
MSH2-206ENST00000543555 PLCH2O75038 1416 aa19.35■□□□□ 0.69
MSH2-206ENST00000543555 KIF7Q2M1P5 1343 aa19.34■□□□□ 0.69
MSH2-206ENST00000543555 UNC13BO14795 1591 aa19.34■□□□□ 0.69
MSH2-206ENST00000543555 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
MSH2-206ENST00000543555 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
MSH2-206ENST00000543555 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.68
MSH2-206ENST00000543555 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
MSH2-206ENST00000543555 USP47Q96K76 1375 aa19.32■□□□□ 0.68
MSH2-206ENST00000543555 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
MSH2-206ENST00000543555 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms