RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 CFDP1Q9UEE9 299 aaPredicted RBP29.66■■■□□ 2.34
ME3-212ENST00000543262 ROCK1Q13464 1354 aa29.65■■■□□ 2.34
ME3-212ENST00000543262 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
ME3-212ENST00000543262 CAMSAP2Q08AD1 1489 aa29.63■■■□□ 2.33
ME3-212ENST00000543262 PPP1R15AO75807 674 aaPredicted RBP29.61■■■□□ 2.33
ME3-212ENST00000543262 TRIM52Q96A61 297 aa29.61■■■□□ 2.33
ME3-212ENST00000543262 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
ME3-212ENST00000543262 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
ME3-212ENST00000543262 DENND4BO75064 1496 aaPredicted RBP29.56■■■□□ 2.32
ME3-212ENST00000543262 CDC42BPAQ5VT25 1732 aa29.56■■■□□ 2.32
ME3-212ENST00000543262 ABCC10Q5T3U5 1492 aa29.55■■■□□ 2.32
ME3-212ENST00000543262 MPHOSPH9Q99550 1183 aa29.51■■■□□ 2.31
ME3-212ENST00000543262 ERCC6L2Q5T890 1561 aa29.5■■■□□ 2.31
ME3-212ENST00000543262 ACIN1Q9UKV3 1341 aaKnown RBP29.48■■■□□ 2.31
ME3-212ENST00000543262 CENPBP07199 599 aaPredicted RBP29.48■■■□□ 2.31
ME3-212ENST00000543262 CROCC2H7BZ55 1655 aa29.48■■■□□ 2.31
ME3-212ENST00000543262 ADGBQ8N7X0 1667 aa29.48■■■□□ 2.31
ME3-212ENST00000543262 NCOA1Q15788 1441 aa29.45■■■□□ 2.3
ME3-212ENST00000543262 CLASP1Q7Z460 1538 aa29.42■■■□□ 2.3
ME3-212ENST00000543262 ADGRL2O95490 1459 aa29.41■■■□□ 2.3
ME3-212ENST00000543262 SCAF1Q9H7N4 1312 aaKnown RBP29.4■■■□□ 2.3
ME3-212ENST00000543262 YTHDC1Q96MU7 727 aaKnown RBP29.39■■■□□ 2.3
ME3-212ENST00000543262 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.3
ME3-212ENST00000543262 FOXD1Q16676 465 aa29.37■■■□□ 2.29
ME3-212ENST00000543262 ABCC2Q92887 1545 aa29.37■■■□□ 2.29
ME3-212ENST00000543262 ANKRD30AQ9BXX3 1397 aa29.36■■■□□ 2.29
ME3-212ENST00000543262 CDC42BPBQ9Y5S2 1711 aa29.33■■■□□ 2.29
ME3-212ENST00000543262 SLC4A1APQ9BWU0 796 aaKnown RBP29.31■■■□□ 2.28
ME3-212ENST00000543262 SHANK2Q9UPX8 1470 aa29.31■■■□□ 2.28
ME3-212ENST00000543262 PREX2Q70Z35 1606 aa29.31■■■□□ 2.28
ME3-212ENST00000543262 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
ME3-212ENST00000543262 ANKRD30BQ9BXX2 1392 aa29.29■■■□□ 2.28
ME3-212ENST00000543262 C9orf84Q5VXU9 1444 aa29.29■■■□□ 2.28
ME3-212ENST00000543262 HNRNPMP52272 730 aaKnown RBP eCLIP29.28■■■□□ 2.28
ME3-212ENST00000543262 PZPP20742 1482 aa29.27■■■□□ 2.28
ME3-212ENST00000543262 ARHGEF5Q12774 1597 aa29.26■■■□□ 2.28
ME3-212ENST00000543262 SAMD9LQ8IVG5 1584 aa29.26■■■□□ 2.27
ME3-212ENST00000543262 TSPY4P0CV99 314 aa29.26■■■□□ 2.27
ME3-212ENST00000543262 TSPY10P0CW01 314 aa29.26■■■□□ 2.27
ME3-212ENST00000543262 MBD5Q9P267 1494 aa29.25■■■□□ 2.27
ME3-212ENST00000543262 TTC37Q6PGP7 1564 aa29.25■■■□□ 2.27
ME3-212ENST00000543262 ANKRD50Q9ULJ7 1429 aa29.24■■■□□ 2.27
ME3-212ENST00000543262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.24■■■□□ 2.27
ME3-212ENST00000543262 DDX10Q13206 875 aaKnown RBP29.23■■■□□ 2.27
ME3-212ENST00000543262 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
ME3-212ENST00000543262 L3MBTL2Q969R5 705 aa29.2■■■□□ 2.27
ME3-212ENST00000543262 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
ME3-212ENST00000543262 ZCCHC11Q5TAX3 1644 aaKnown RBP29.19■■■□□ 2.26
ME3-212ENST00000543262 ARHGAP5Q13017 1502 aa29.17■■■□□ 2.26
ME3-212ENST00000543262 CCDC141Q6ZP82 1450 aa29.17■■■□□ 2.26
ME3-212ENST00000543262 MYO5CQ9NQX4 1742 aa29.16■■■□□ 2.26
ME3-212ENST00000543262 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
ME3-212ENST00000543262 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
ME3-212ENST00000543262 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
ME3-212ENST00000543262 KIAA1107Q9UPP5 1409 aa29.13■■■□□ 2.25
ME3-212ENST00000543262 SYCP2Q9BX26 1530 aa29.11■■■□□ 2.25
ME3-212ENST00000543262 PKD2Q13563 968 aa29.1■■■□□ 2.25
ME3-212ENST00000543262 TEX14Q8IWB6 1497 aa29.1■■■□□ 2.25
ME3-212ENST00000543262 NUP155O75694 1391 aa29.09■■■□□ 2.25
ME3-212ENST00000543262 GTF3C3Q9Y5Q9 886 aa29.07■■■□□ 2.24
ME3-212ENST00000543262 KDM5DQ9BY66 1539 aa29.04■■■□□ 2.24
ME3-212ENST00000543262 MAST1Q9Y2H9 1570 aa29.03■■■□□ 2.24
ME3-212ENST00000543262 PLEKHH2Q8IVE3 1493 aa29.02■■■□□ 2.24
ME3-212ENST00000543262 PLCH2O75038 1416 aa29.02■■■□□ 2.24
ME3-212ENST00000543262 HSPA5P11021 654 aaKnown RBP29.02■■■□□ 2.24
ME3-212ENST00000543262 NBPF8Q3BBV2 869 aa29.01■■■□□ 2.23
ME3-212ENST00000543262 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
ME3-212ENST00000543262 ARHGEF12Q9NZN5 1544 aa28.97■■■□□ 2.23
ME3-212ENST00000543262 EFCAB2Q5VUJ9 269 aa28.95■■■□□ 2.23
ME3-212ENST00000543262 PELP1Q8IZL8 1130 aaKnown RBP28.94■■■□□ 2.22
ME3-212ENST00000543262 PLXNC1O60486 1568 aa28.92■■■□□ 2.22
ME3-212ENST00000543262 ANP32CO43423 234 aa28.89■■■□□ 2.22
ME3-212ENST00000543262 WASHC2AQ641Q2 1341 aa28.89■■■□□ 2.21
ME3-212ENST00000543262 FAM135AQ9P2D6 1515 aa28.88■■■□□ 2.21
ME3-212ENST00000543262 ABCC1P33527 1531 aa28.88■■■□□ 2.21
ME3-212ENST00000543262 WDR7Q9Y4E6 1490 aa28.87■■■□□ 2.21
ME3-212ENST00000543262 UNC13BO14795 1591 aa28.86■■■□□ 2.21
ME3-212ENST00000543262 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
ME3-212ENST00000543262 ARAP3Q8WWN8 1544 aa28.83■■■□□ 2.21
ME3-212ENST00000543262 DUOX2Q9NRD8 1548 aa28.83■■■□□ 2.2
ME3-212ENST00000543262 TRAPPC8Q9Y2L5 1435 aa28.82■■■□□ 2.2
ME3-212ENST00000543262 SPATA31E1Q6ZUB1 1445 aa28.8■■■□□ 2.2
ME3-212ENST00000543262 CCER2I3L3R5 266 aa28.8■■■□□ 2.2
ME3-212ENST00000543262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.79■■■□□ 2.2
ME3-212ENST00000543262 C11orf95C9JLR9 678 aaPredicted RBP28.78■■■□□ 2.2
ME3-212ENST00000543262 ZNF326Q5BKZ1 582 aaKnown RBP28.77■■■□□ 2.2
ME3-212ENST00000543262 ERBINQ96RT1 1412 aa28.76■■■□□ 2.19
ME3-212ENST00000543262 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
ME3-212ENST00000543262 IQGAP3Q86VI3 1631 aa28.75■■■□□ 2.19
ME3-212ENST00000543262 CCDC7Q96M83 1385 aa28.74■■■□□ 2.19
ME3-212ENST00000543262 UHRF1BP1Q6BDS2 1440 aa28.73■■■□□ 2.19
ME3-212ENST00000543262 ASXL2Q76L83 1435 aa28.73■■■□□ 2.19
ME3-212ENST00000543262 AFAP1Q8N556 730 aa28.72■■■□□ 2.19
ME3-212ENST00000543262 SPAG9O60271 1321 aaKnown RBP28.71■■■□□ 2.19
ME3-212ENST00000543262 FANCAO15360 1455 aa28.71■■■□□ 2.19
ME3-212ENST00000543262 MAGI2Q86UL8 1455 aa28.7■■■□□ 2.18
ME3-212ENST00000543262 POLR1AO95602 1720 aaPredicted RBP28.7■■■□□ 2.18
ME3-212ENST00000543262 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
ME3-212ENST00000543262 CCDC144AA2RUR9 1427 aa28.67■■■□□ 2.18
ME3-212ENST00000543262 CNTLNQ9NXG0 1405 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms