RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-222ENST00000543049 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
NLRC5-222ENST00000543049 ZMYM4Q5VZL5 1548 aa18.1■□□□□ 0.49
NLRC5-222ENST00000543049 MAGI2Q86UL8 1455 aa18.08■□□□□ 0.49
NLRC5-222ENST00000543049 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
NLRC5-222ENST00000543049 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
NLRC5-222ENST00000543049 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
NLRC5-222ENST00000543049 ATP10AO60312 1499 aa18.03■□□□□ 0.48
NLRC5-222ENST00000543049 HSPA1LP34931 641 aa18.02■□□□□ 0.48
NLRC5-222ENST00000543049 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
NLRC5-222ENST00000543049 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
NLRC5-222ENST00000543049 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
NLRC5-222ENST00000543049 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
NLRC5-222ENST00000543049 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
NLRC5-222ENST00000543049 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
NLRC5-222ENST00000543049 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
NLRC5-222ENST00000543049 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
NLRC5-222ENST00000543049 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
NLRC5-222ENST00000543049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.95■□□□□ 0.46
NLRC5-222ENST00000543049 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
NLRC5-222ENST00000543049 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
NLRC5-222ENST00000543049 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
NLRC5-222ENST00000543049 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
NLRC5-222ENST00000543049 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
NLRC5-222ENST00000543049 C3P01024 1663 aa17.91■□□□□ 0.46
NLRC5-222ENST00000543049 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.45
NLRC5-222ENST00000543049 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.45
NLRC5-222ENST00000543049 TOM1O60784 492 aa17.85■□□□□ 0.45
NLRC5-222ENST00000543049 PLCH2O75038 1416 aa17.85■□□□□ 0.45
NLRC5-222ENST00000543049 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
NLRC5-222ENST00000543049 AFAP1Q8N556 730 aa17.84■□□□□ 0.45
NLRC5-222ENST00000543049 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
NLRC5-222ENST00000543049 SAMD9Q5K651 1589 aa17.83■□□□□ 0.44
NLRC5-222ENST00000543049 RANGAP1P46060 587 aaPredicted RBP17.81■□□□□ 0.44
NLRC5-222ENST00000543049 PKD2Q13563 968 aa17.81■□□□□ 0.44
NLRC5-222ENST00000543049 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
NLRC5-222ENST00000543049 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
NLRC5-222ENST00000543049 ZNF518AQ6AHZ1 1483 aa17.76■□□□□ 0.43
NLRC5-222ENST00000543049 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
NLRC5-222ENST00000543049 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
NLRC5-222ENST00000543049 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
NLRC5-222ENST00000543049 NPATQ14207 1427 aa17.73■□□□□ 0.43
NLRC5-222ENST00000543049 AGLP35573 1532 aa17.73■□□□□ 0.43
NLRC5-222ENST00000543049 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
NLRC5-222ENST00000543049 KDM5CP41229 1560 aa17.71■□□□□ 0.43
NLRC5-222ENST00000543049 PLA2R1Q13018 1463 aa17.71■□□□□ 0.43
NLRC5-222ENST00000543049 TCOF1Q13428 1488 aaKnown RBP17.71■□□□□ 0.43
NLRC5-222ENST00000543049 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
NLRC5-222ENST00000543049 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
NLRC5-222ENST00000543049 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
NLRC5-222ENST00000543049 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
NLRC5-222ENST00000543049 MLH3Q9UHC1 1453 aa17.66■□□□□ 0.42
NLRC5-222ENST00000543049 SUPT6HQ7KZ85 1726 aaKnown RBP17.66■□□□□ 0.42
NLRC5-222ENST00000543049 CPS1P31327 1500 aa17.66■□□□□ 0.42
NLRC5-222ENST00000543049 PTPRKQ15262 1439 aa17.65■□□□□ 0.42
NLRC5-222ENST00000543049 ARHGAP5Q13017 1502 aa17.64■□□□□ 0.41
NLRC5-222ENST00000543049 SHANK2Q9UPX8 1470 aa17.63■□□□□ 0.41
NLRC5-222ENST00000543049 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
NLRC5-222ENST00000543049 MYO3AQ8NEV4 1616 aa17.62■□□□□ 0.41
NLRC5-222ENST00000543049 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
NLRC5-222ENST00000543049 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
NLRC5-222ENST00000543049 MROH2AA6NES4 1674 aa17.61■□□□□ 0.41
NLRC5-222ENST00000543049 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
NLRC5-222ENST00000543049 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
NLRC5-222ENST00000543049 KIF14Q15058 1648 aa17.57■□□□□ 0.4
NLRC5-222ENST00000543049 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
NLRC5-222ENST00000543049 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
NLRC5-222ENST00000543049 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
NLRC5-222ENST00000543049 KIDINS220Q9ULH0 1771 aa17.53■□□□□ 0.4
NLRC5-222ENST00000543049 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
NLRC5-222ENST00000543049 DNMT1P26358 1616 aaKnown RBP17.51■□□□□ 0.39
NLRC5-222ENST00000543049 GGT6Q6P531 493 aa17.51■□□□□ 0.39
NLRC5-222ENST00000543049 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
NLRC5-222ENST00000543049 NEURL4Q96JN8 1562 aa17.5■□□□□ 0.39
NLRC5-222ENST00000543049 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
NLRC5-222ENST00000543049 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
NLRC5-222ENST00000543049 CDC42BPBQ9Y5S2 1711 aa17.48■□□□□ 0.39
NLRC5-222ENST00000543049 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
NLRC5-222ENST00000543049 ABCC1P33527 1531 aa17.47■□□□□ 0.39
NLRC5-222ENST00000543049 ITSN2Q9NZM3 1697 aa17.46■□□□□ 0.39
NLRC5-222ENST00000543049 SETD1AO15047 1707 aaKnown RBP17.46■□□□□ 0.39
NLRC5-222ENST00000543049 CLIP1P30622 1438 aa17.45■□□□□ 0.38
NLRC5-222ENST00000543049 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
NLRC5-222ENST00000543049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
NLRC5-222ENST00000543049 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
NLRC5-222ENST00000543049 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
NLRC5-222ENST00000543049 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
NLRC5-222ENST00000543049 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
NLRC5-222ENST00000543049 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
NLRC5-222ENST00000543049 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
NLRC5-222ENST00000543049 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
NLRC5-222ENST00000543049 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.38
NLRC5-222ENST00000543049 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
NLRC5-222ENST00000543049 TNRQ92752 1358 aa17.39■□□□□ 0.37
NLRC5-222ENST00000543049 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.37
NLRC5-222ENST00000543049 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
NLRC5-222ENST00000543049 A2MP01023 1474 aa17.37■□□□□ 0.37
NLRC5-222ENST00000543049 MED14O60244 1454 aa17.37■□□□□ 0.37
NLRC5-222ENST00000543049 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
NLRC5-222ENST00000543049 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
NLRC5-222ENST00000543049 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms