RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
PTPRO-208ENST00000542557 KDM6BO15054 1643 aa9.35□□□□□ -0.91
PTPRO-208ENST00000542557 TROQ12816 1431 aaPredicted RBP9.35□□□□□ -0.91
PTPRO-208ENST00000542557 SENP3Q9H4L4 574 aaPredicted RBP9.35□□□□□ -0.91
PTPRO-208ENST00000542557 CDK11AQ9UQ88 783 aaPredicted RBP9.34□□□□□ -0.91
PTPRO-208ENST00000542557 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.91
PTPRO-208ENST00000542557 ABCC5O15440 1437 aa9.33□□□□□ -0.92
PTPRO-208ENST00000542557 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
PTPRO-208ENST00000542557 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
PTPRO-208ENST00000542557 RRP7BPQ9NSQ0 103 aa9.32□□□□□ -0.92
PTPRO-208ENST00000542557 ABCA8O94911 1581 aa9.32□□□□□ -0.92
PTPRO-208ENST00000542557 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
PTPRO-208ENST00000542557 CROCC2H7BZ55 1655 aa9.31□□□□□ -0.92
PTPRO-208ENST00000542557 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
PTPRO-208ENST00000542557 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
PTPRO-208ENST00000542557 KIF14Q15058 1648 aa9.3□□□□□ -0.92
PTPRO-208ENST00000542557 ADGRL2O95490 1459 aa9.3□□□□□ -0.92
PTPRO-208ENST00000542557 PRG4Q92954 1404 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-208ENST00000542557 GPATCH8Q9UKJ3 1502 aaKnown RBP9.29□□□□□ -0.92
PTPRO-208ENST00000542557 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
PTPRO-208ENST00000542557 DDX10Q13206 875 aaKnown RBP9.28□□□□□ -0.92
PTPRO-208ENST00000542557 MPHOSPH9Q99550 1183 aa9.28□□□□□ -0.92
PTPRO-208ENST00000542557 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
PTPRO-208ENST00000542557 RPRD2Q5VT52 1461 aaKnown RBP9.27□□□□□ -0.93
PTPRO-208ENST00000542557 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
PTPRO-208ENST00000542557 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
PTPRO-208ENST00000542557 CDC42BPAQ5VT25 1732 aa9.26□□□□□ -0.93
PTPRO-208ENST00000542557 ABCC10Q5T3U5 1492 aa9.26□□□□□ -0.93
PTPRO-208ENST00000542557 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
PTPRO-208ENST00000542557 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
PTPRO-208ENST00000542557 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
PTPRO-208ENST00000542557 NCOA1Q15788 1441 aa9.25□□□□□ -0.93
PTPRO-208ENST00000542557 ZNF644Q9H582 1327 aaPredicted RBP9.25□□□□□ -0.93
PTPRO-208ENST00000542557 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
PTPRO-208ENST00000542557 ATP10BO94823 1461 aa9.24□□□□□ -0.93
PTPRO-208ENST00000542557 PZPP20742 1482 aa9.24□□□□□ -0.93
PTPRO-208ENST00000542557 FBLN2P98095 1184 aa9.24□□□□□ -0.93
PTPRO-208ENST00000542557 ANP32CO43423 234 aa9.23□□□□□ -0.93
PTPRO-208ENST00000542557 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
PTPRO-208ENST00000542557 ARHGEF5Q12774 1597 aa9.22□□□□□ -0.93
PTPRO-208ENST00000542557 ANKRD30AQ9BXX3 1397 aa9.22□□□□□ -0.93
PTPRO-208ENST00000542557 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
PTPRO-208ENST00000542557 SHROOM2Q13796 1616 aa9.22□□□□□ -0.93
PTPRO-208ENST00000542557 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.93
PTPRO-208ENST00000542557 KCNH8Q96L42 1107 aa9.21□□□□□ -0.93
PTPRO-208ENST00000542557 KDM5DQ9BY66 1539 aa9.21□□□□□ -0.93
PTPRO-208ENST00000542557 CHD1O14646 1710 aa9.21□□□□□ -0.94
PTPRO-208ENST00000542557 POLR1AO95602 1720 aaPredicted RBP9.2□□□□□ -0.94
PTPRO-208ENST00000542557 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
PTPRO-208ENST00000542557 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
PTPRO-208ENST00000542557 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
PTPRO-208ENST00000542557 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
PTPRO-208ENST00000542557 KIAA1107Q9UPP5 1409 aa9.2□□□□□ -0.94
PTPRO-208ENST00000542557 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
PTPRO-208ENST00000542557 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRO-208ENST00000542557 SLC4A1APQ9BWU0 796 aaKnown RBP9.19□□□□□ -0.94
PTPRO-208ENST00000542557 C9orf84Q5VXU9 1444 aa9.19□□□□□ -0.94
PTPRO-208ENST00000542557 ANKRD50Q9ULJ7 1429 aa9.19□□□□□ -0.94
PTPRO-208ENST00000542557 PTPRGP23470 1445 aa9.18□□□□□ -0.94
PTPRO-208ENST00000542557 SUPT16HQ9Y5B9 1047 aaKnown RBP9.18□□□□□ -0.94
PTPRO-208ENST00000542557 WASHC2AQ641Q2 1341 aa9.18□□□□□ -0.94
PTPRO-208ENST00000542557 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
PTPRO-208ENST00000542557 FOXD1Q16676 465 aa9.17□□□□□ -0.94
PTPRO-208ENST00000542557 SPATA31E1Q6ZUB1 1445 aa9.17□□□□□ -0.94
PTPRO-208ENST00000542557 CDC42BPBQ9Y5S2 1711 aa9.16□□□□□ -0.94
PTPRO-208ENST00000542557 SAMD9LQ8IVG5 1584 aa9.16□□□□□ -0.94
PTPRO-208ENST00000542557 CCDC141Q6ZP82 1450 aa9.16□□□□□ -0.94
PTPRO-208ENST00000542557 ZNF777Q9ULD5 760 aaPredicted RBP9.15□□□□□ -0.94
PTPRO-208ENST00000542557 MAST1Q9Y2H9 1570 aa9.15□□□□□ -0.94
PTPRO-208ENST00000542557 CCDC7Q96M83 1385 aa9.15□□□□□ -0.94
PTPRO-208ENST00000542557 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.95
PTPRO-208ENST00000542557 NBPF8Q3BBV2 869 aa9.15□□□□□ -0.95
PTPRO-208ENST00000542557 ABCC2Q92887 1545 aa9.14□□□□□ -0.95
PTPRO-208ENST00000542557 UHRF1BP1Q6BDS2 1440 aa9.13□□□□□ -0.95
PTPRO-208ENST00000542557 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
PTPRO-208ENST00000542557 TTC37Q6PGP7 1564 aa9.13□□□□□ -0.95
PTPRO-208ENST00000542557 RSPH4AQ5TD94 716 aa9.12□□□□□ -0.95
PTPRO-208ENST00000542557 TSPY4P0CV99 314 aa9.12□□□□□ -0.95
PTPRO-208ENST00000542557 TSPY10P0CW01 314 aa9.12□□□□□ -0.95
PTPRO-208ENST00000542557 PKD2Q13563 968 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRO-208ENST00000542557 MYO5CQ9NQX4 1742 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 UNC13BO14795 1591 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 RALGAPBQ86X10 1494 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 PLEKHH2Q8IVE3 1493 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 KDM5CP41229 1560 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 CLASP1Q7Z460 1538 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 NUP155O75694 1391 aa9.11□□□□□ -0.95
PTPRO-208ENST00000542557 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
PTPRO-208ENST00000542557 TAOK2Q9UL54 1235 aa9.1□□□□□ -0.95
PTPRO-208ENST00000542557 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
PTPRO-208ENST00000542557 ARHGAP5Q13017 1502 aa9.09□□□□□ -0.95
PTPRO-208ENST00000542557 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
PTPRO-208ENST00000542557 ERCC6L2Q5T890 1561 aa9.09□□□□□ -0.95
PTPRO-208ENST00000542557 KIF7Q2M1P5 1343 aa9.09□□□□□ -0.96
PTPRO-208ENST00000542557 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
PTPRO-208ENST00000542557 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
PTPRO-208ENST00000542557 USP47Q96K76 1375 aa9.08□□□□□ -0.96
PTPRO-208ENST00000542557 HNRNPMP52272 730 aaKnown RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms