RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PLSCR2Q9NRY7 297 aa7.49□□□□□ -1.21
ATPAF1-212ENST00000542495 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-212ENST00000542495 GRIN2BQ13224 1484 aa7.49□□□□□ -1.21
ATPAF1-212ENST00000542495 FGD6Q6ZV73 1430 aa7.49□□□□□ -1.21
ATPAF1-212ENST00000542495 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 P3H3Q8IVL6 736 aa7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 REM2Q8IYK8 340 aaPredicted RBP7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 VSIG10Q8N0Z9 540 aa7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 LRRIQ1Q96JM4 1722 aa7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 GAPVD1Q14C86 1478 aa7.48□□□□□ -1.21
ATPAF1-212ENST00000542495 RIMBP3CA6NJZ7 1639 aa7.47□□□□□ -1.21
ATPAF1-212ENST00000542495 RIMBP3BA6NNM3 1639 aa7.47□□□□□ -1.21
ATPAF1-212ENST00000542495 RIMBP3Q9UFD9 1639 aa7.47□□□□□ -1.21
ATPAF1-212ENST00000542495 TAOK2Q9UL54 1235 aa7.47□□□□□ -1.21
ATPAF1-212ENST00000542495 FBLN2P98095 1184 aa7.46□□□□□ -1.21
ATPAF1-212ENST00000542495 TARBP1Q13395 1621 aaKnown RBP7.46□□□□□ -1.21
ATPAF1-212ENST00000542495 HFM1A2PYH4 1435 aa7.46□□□□□ -1.21
ATPAF1-212ENST00000542495 ARHGEF11O15085 1522 aa7.46□□□□□ -1.22
ATPAF1-212ENST00000542495 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 TDRD9Q8NDG6 1382 aaKnown RBP7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 PTPRKQ15262 1439 aa7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 SIN3AQ96ST3 1273 aa7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 EHBP1L1Q8N3D4 1523 aa7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
ATPAF1-212ENST00000542495 NCOA2Q15596 1464 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 MYOM3Q5VTT5 1437 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 UACAQ9BZF9 1416 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 PPP1R15AO75807 674 aaPredicted RBP7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 LHX8Q68G74 356 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 CCDC18Q5T9S5 1454 aa7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 SUPT6HQ7KZ85 1726 aaKnown RBP7.44□□□□□ -1.22
ATPAF1-212ENST00000542495 PITPNM1O00562 1244 aa7.43□□□□□ -1.22
ATPAF1-212ENST00000542495 ATP1B4Q9UN42 357 aaPredicted RBP7.43□□□□□ -1.22
ATPAF1-212ENST00000542495 MTUS2Q5JR59 1369 aa7.43□□□□□ -1.22
ATPAF1-212ENST00000542495 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
ATPAF1-212ENST00000542495 NAIPQ13075 1403 aa7.42□□□□□ -1.22
ATPAF1-212ENST00000542495 MAGI3Q5TCQ9 1506 aa7.42□□□□□ -1.22
ATPAF1-212ENST00000542495 CYB5RLQ6IPT4 315 aa7.41□□□□□ -1.22
ATPAF1-212ENST00000542495 KDM2AQ9Y2K7 1162 aa7.41□□□□□ -1.22
ATPAF1-212ENST00000542495 PBRM1Q86U86 1689 aa7.41□□□□□ -1.22
ATPAF1-212ENST00000542495 CHD1O14646 1710 aa7.41□□□□□ -1.22
ATPAF1-212ENST00000542495 SUPT16HQ9Y5B9 1047 aaKnown RBP7.41□□□□□ -1.22
ATPAF1-212ENST00000542495 KDM5BQ9UGL1 1544 aa7.4□□□□□ -1.22
ATPAF1-212ENST00000542495 AKNAQ7Z591 1439 aa7.4□□□□□ -1.22
ATPAF1-212ENST00000542495 ADAMTS12P58397 1594 aa7.4□□□□□ -1.22
ATPAF1-212ENST00000542495 HECW1Q76N89 1606 aa7.4□□□□□ -1.22
ATPAF1-212ENST00000542495 GCC2Q8IWJ2 1684 aa7.39□□□□□ -1.23
ATPAF1-212ENST00000542495 IQGAP2Q13576 1575 aa7.39□□□□□ -1.23
ATPAF1-212ENST00000542495 NPM1P06748 294 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATPAF1-212ENST00000542495 BBXQ8WY36 941 aaPredicted RBP7.38□□□□□ -1.23
ATPAF1-212ENST00000542495 KCNH8Q96L42 1107 aa7.38□□□□□ -1.23
ATPAF1-212ENST00000542495 CCER2I3L3R5 266 aa7.38□□□□□ -1.23
ATPAF1-212ENST00000542495 DDX10Q13206 875 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-212ENST00000542495 EPRSP07814 1512 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-212ENST00000542495 TONSLQ96HA7 1378 aa7.37□□□□□ -1.23
ATPAF1-212ENST00000542495 MIA2Q96PC5 1412 aa7.37□□□□□ -1.23
ATPAF1-212ENST00000542495 DENND4BO75064 1496 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-212ENST00000542495 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-212ENST00000542495 CHMP7Q8WUX9 453 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-212ENST00000542495 MAGI1Q96QZ7 1491 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-212ENST00000542495 TPRNQ4KMQ1 711 aa7.35□□□□□ -1.23
ATPAF1-212ENST00000542495 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
ATPAF1-212ENST00000542495 ECM2O94769 699 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-212ENST00000542495 MYT1Q01538 1121 aa7.34□□□□□ -1.23
ATPAF1-212ENST00000542495 PAXIP1Q6ZW49 1069 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-212ENST00000542495 CDK13Q14004 1512 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-212ENST00000542495 KDM6BO15054 1643 aa7.33□□□□□ -1.24
ATPAF1-212ENST00000542495 CLASP1Q7Z460 1538 aa7.33□□□□□ -1.24
ATPAF1-212ENST00000542495 KIAA0586Q9BVV6 1533 aa7.33□□□□□ -1.24
ATPAF1-212ENST00000542495 KIAA0556O60303 1618 aa7.32□□□□□ -1.24
ATPAF1-212ENST00000542495 DISP1Q96F81 1524 aa7.32□□□□□ -1.24
ATPAF1-212ENST00000542495 SYNJ2O15056 1496 aa7.32□□□□□ -1.24
ATPAF1-212ENST00000542495 ROCK1Q13464 1354 aa7.32□□□□□ -1.24
ATPAF1-212ENST00000542495 ANP32CO43423 234 aa7.31□□□□□ -1.24
ATPAF1-212ENST00000542495 GABBR2O75899 941 aa7.31□□□□□ -1.24
ATPAF1-212ENST00000542495 KLHL34Q8N239 644 aa7.31□□□□□ -1.24
ATPAF1-212ENST00000542495 CFAP44Q96MT7 982 aa7.31□□□□□ -1.24
ATPAF1-212ENST00000542495 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-212ENST00000542495 DNMT1P26358 1616 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-212ENST00000542495 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-212ENST00000542495 RGL2O15211 777 aa7.3□□□□□ -1.24
ATPAF1-212ENST00000542495 RRP7BPQ9NSQ0 103 aa7.3□□□□□ -1.24
ATPAF1-212ENST00000542495 DAPK1P53355 1430 aa7.29□□□□□ -1.24
ATPAF1-212ENST00000542495 RAPGEF6Q8TEU7 1601 aa7.29□□□□□ -1.24
ATPAF1-212ENST00000542495 ABCC5O15440 1437 aa7.29□□□□□ -1.24
ATPAF1-212ENST00000542495 MPHOSPH9Q99550 1183 aa7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 ZBTB12Q9Y330 459 aaPredicted RBP7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 ANKRD30BQ9BXX2 1392 aa7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 RPRD2Q5VT52 1461 aaKnown RBP7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 CHIC2Q9UKJ5 165 aa7.28□□□□□ -1.24
ATPAF1-212ENST00000542495 WASHC2AQ641Q2 1341 aa7.27□□□□□ -1.25
ATPAF1-212ENST00000542495 C19orf67A6NJJ6 358 aa7.27□□□□□ -1.25
ATPAF1-212ENST00000542495 ADCY10Q96PN6 1610 aa7.26□□□□□ -1.25
ATPAF1-212ENST00000542495 TEX14Q8IWB6 1497 aa7.26□□□□□ -1.25
ATPAF1-212ENST00000542495 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-212ENST00000542495 NCOA1Q15788 1441 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms