RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 CSRNP3Q8WYN3 585 aa25.7■■□□□ 1.7
RAD9A-207ENST00000542139 SIGLEC1Q9BZZ2 1709 aa25.69■■□□□ 1.7
RAD9A-207ENST00000542139 HECW1Q76N89 1606 aa25.69■■□□□ 1.7
RAD9A-207ENST00000542139 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
RAD9A-207ENST00000542139 SCAPERQ9BY12 1400 aa25.66■■□□□ 1.7
RAD9A-207ENST00000542139 ATP10AO60312 1499 aa25.62■■□□□ 1.69
RAD9A-207ENST00000542139 CEBPAP49715 358 aaPredicted RBP25.62■■□□□ 1.69
RAD9A-207ENST00000542139 ARHGEF12Q9NZN5 1544 aa25.62■■□□□ 1.69
RAD9A-207ENST00000542139 C9orf84Q5VXU9 1444 aa25.62■■□□□ 1.69
RAD9A-207ENST00000542139 UHRF1BP1Q6BDS2 1440 aa25.6■■□□□ 1.69
RAD9A-207ENST00000542139 PLCH2O75038 1416 aa25.58■■□□□ 1.69
RAD9A-207ENST00000542139 MYT1LQ9UL68 1186 aa25.56■■□□□ 1.68
RAD9A-207ENST00000542139 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
RAD9A-207ENST00000542139 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
RAD9A-207ENST00000542139 STRCQ7RTU9 1775 aa25.53■■□□□ 1.68
RAD9A-207ENST00000542139 CDK13Q14004 1512 aaKnown RBP25.52■■□□□ 1.68
RAD9A-207ENST00000542139 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
RAD9A-207ENST00000542139 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
RAD9A-207ENST00000542139 SETD1BQ9UPS6 1966 aaKnown RBP25.48■■□□□ 1.67
RAD9A-207ENST00000542139 PTPRTO14522 1441 aa25.47■■□□□ 1.67
RAD9A-207ENST00000542139 ZNF518AQ6AHZ1 1483 aa25.47■■□□□ 1.67
RAD9A-207ENST00000542139 MYO5CQ9NQX4 1742 aa25.46■■□□□ 1.67
RAD9A-207ENST00000542139 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
RAD9A-207ENST00000542139 EEA1Q15075 1411 aa25.45■■□□□ 1.66
RAD9A-207ENST00000542139 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
RAD9A-207ENST00000542139 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
RAD9A-207ENST00000542139 IQSEC2Q5JU85 1478 aa25.36■■□□□ 1.65
RAD9A-207ENST00000542139 C3P01024 1663 aa25.36■■□□□ 1.65
RAD9A-207ENST00000542139 KDM5CP41229 1560 aa25.35■■□□□ 1.65
RAD9A-207ENST00000542139 KIF14Q15058 1648 aa25.35■■□□□ 1.65
RAD9A-207ENST00000542139 DIP2CQ9Y2E4 1556 aa25.35■■□□□ 1.65
RAD9A-207ENST00000542139 LTBP4Q8N2S1 1624 aa25.34■■□□□ 1.65
RAD9A-207ENST00000542139 TRAPPC8Q9Y2L5 1435 aa25.34■■□□□ 1.65
RAD9A-207ENST00000542139 FMN1Q68DA7 1419 aa25.33■■□□□ 1.65
RAD9A-207ENST00000542139 REREQ9P2R6 1566 aa25.32■■□□□ 1.64
RAD9A-207ENST00000542139 CLIP1P30622 1438 aa25.32■■□□□ 1.64
RAD9A-207ENST00000542139 NCOA1Q15788 1441 aa25.29■■□□□ 1.64
RAD9A-207ENST00000542139 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
RAD9A-207ENST00000542139 ABCA6Q8N139 1617 aa25.28■■□□□ 1.64
RAD9A-207ENST00000542139 MLH3Q9UHC1 1453 aa25.28■■□□□ 1.64
RAD9A-207ENST00000542139 CNTLNQ9NXG0 1405 aa25.27■■□□□ 1.64
RAD9A-207ENST00000542139 AGLP35573 1532 aa25.26■■□□□ 1.63
RAD9A-207ENST00000542139 UBAP1LF5GYI3 381 aa25.25■■□□□ 1.63
RAD9A-207ENST00000542139 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
RAD9A-207ENST00000542139 EHMT2Q96KQ7 1210 aa25.22■■□□□ 1.63
RAD9A-207ENST00000542139 CAMSAP1Q5T5Y3 1602 aa25.22■■□□□ 1.63
RAD9A-207ENST00000542139 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
RAD9A-207ENST00000542139 ZNF335Q9H4Z2 1342 aaPredicted RBP25.17■■□□□ 1.62
RAD9A-207ENST00000542139 NCKAP5LQ9HCH0 1330 aa25.17■■□□□ 1.62
RAD9A-207ENST00000542139 NPATQ14207 1427 aa25.17■■□□□ 1.62
RAD9A-207ENST00000542139 ABCC1P33527 1531 aa25.16■■□□□ 1.62
RAD9A-207ENST00000542139 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
RAD9A-207ENST00000542139 ITSN2Q9NZM3 1697 aa25.13■■□□□ 1.61
RAD9A-207ENST00000542139 PREX2Q70Z35 1606 aa25.13■■□□□ 1.61
RAD9A-207ENST00000542139 ZMYM3Q14202 1370 aa25.12■■□□□ 1.61
RAD9A-207ENST00000542139 KIDINS220Q9ULH0 1771 aa25.11■■□□□ 1.61
RAD9A-207ENST00000542139 PKD2Q13563 968 aa25.11■■□□□ 1.61
RAD9A-207ENST00000542139 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
RAD9A-207ENST00000542139 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
RAD9A-207ENST00000542139 ZNF777Q9ULD5 760 aaPredicted RBP25.07■■□□□ 1.6
RAD9A-207ENST00000542139 PLA2R1Q13018 1463 aa25.05■■□□□ 1.6
RAD9A-207ENST00000542139 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
RAD9A-207ENST00000542139 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
RAD9A-207ENST00000542139 LRRIQ1Q96JM4 1722 aa25.04■■□□□ 1.6
RAD9A-207ENST00000542139 PPP6R1Q9UPN7 881 aa25.04■■□□□ 1.6
RAD9A-207ENST00000542139 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
RAD9A-207ENST00000542139 SAMD9LQ8IVG5 1584 aa25.02■■□□□ 1.6
RAD9A-207ENST00000542139 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
RAD9A-207ENST00000542139 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
RAD9A-207ENST00000542139 CLTCQ00610 1675 aaKnown RBP25.01■■□□□ 1.59
RAD9A-207ENST00000542139 PIP4K2BP78356 416 aa25■■□□□ 1.59
RAD9A-207ENST00000542139 ZNF142P52746 1687 aaPredicted RBP25■■□□□ 1.59
RAD9A-207ENST00000542139 CDC42BPAQ5VT25 1732 aa24.98■■□□□ 1.59
RAD9A-207ENST00000542139 TCOF1Q13428 1488 aaKnown RBP24.98■■□□□ 1.59
RAD9A-207ENST00000542139 HSPA1LP34931 641 aa24.98■■□□□ 1.59
RAD9A-207ENST00000542139 GGT6Q6P531 493 aa24.98■■□□□ 1.59
RAD9A-207ENST00000542139 TOM1O60784 492 aa24.97■■□□□ 1.59
RAD9A-207ENST00000542139 HNRNPMP52272 730 aaKnown RBP eCLIP24.96■■□□□ 1.59
RAD9A-207ENST00000542139 SYCP2Q9BX26 1530 aa24.96■■□□□ 1.59
RAD9A-207ENST00000542139 PTPRKQ15262 1439 aa24.95■■□□□ 1.59
RAD9A-207ENST00000542139 MED1Q15648 1581 aaPredicted RBP24.95■■□□□ 1.58
RAD9A-207ENST00000542139 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
RAD9A-207ENST00000542139 CASKIN1Q8WXD9 1431 aa24.94■■□□□ 1.58
RAD9A-207ENST00000542139 ATP7AQ04656 1500 aa24.93■■□□□ 1.58
RAD9A-207ENST00000542139 A2MP01023 1474 aa24.93■■□□□ 1.58
RAD9A-207ENST00000542139 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
RAD9A-207ENST00000542139 PLEKHH2Q8IVE3 1493 aa24.88■■□□□ 1.57
RAD9A-207ENST00000542139 PLXNC1O60486 1568 aa24.88■■□□□ 1.57
RAD9A-207ENST00000542139 CPS1P31327 1500 aa24.87■■□□□ 1.57
RAD9A-207ENST00000542139 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
RAD9A-207ENST00000542139 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
RAD9A-207ENST00000542139 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
RAD9A-207ENST00000542139 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
RAD9A-207ENST00000542139 DNMT1P26358 1616 aaKnown RBP24.83■■□□□ 1.57
RAD9A-207ENST00000542139 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.56
RAD9A-207ENST00000542139 CCNB3Q8WWL7 1395 aa24.8■■□□□ 1.56
RAD9A-207ENST00000542139 FYCO1Q9BQS8 1478 aa24.8■■□□□ 1.56
RAD9A-207ENST00000542139 POLR1AO95602 1720 aaPredicted RBP24.8■■□□□ 1.56
RAD9A-207ENST00000542139 ADGBQ8N7X0 1667 aa24.78■■□□□ 1.56
RAD9A-207ENST00000542139 TNRQ92752 1358 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms