RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
EPHA4-214ENST00000541600 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
EPHA4-214ENST00000541600 RUSC2Q8N2Y8 1516 aa10.32□□□□□ -0.76
EPHA4-214ENST00000541600 CEP170Q5SW79 1584 aa10.31□□□□□ -0.76
EPHA4-214ENST00000541600 DSG3P32926 999 aa10.31□□□□□ -0.76
EPHA4-214ENST00000541600 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
EPHA4-214ENST00000541600 DIP2BQ9P265 1576 aa10.3□□□□□ -0.76
EPHA4-214ENST00000541600 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-214ENST00000541600 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
EPHA4-214ENST00000541600 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
EPHA4-214ENST00000541600 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
EPHA4-214ENST00000541600 ARXQ96QS3 562 aa10.27□□□□□ -0.77
EPHA4-214ENST00000541600 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
EPHA4-214ENST00000541600 NUBP1P53384 320 aa10.24□□□□□ -0.77
EPHA4-214ENST00000541600 DISP3Q9P2K9 1392 aa10.24□□□□□ -0.77
EPHA4-214ENST00000541600 FGD5Q6ZNL6 1462 aa10.23□□□□□ -0.77
EPHA4-214ENST00000541600 SHROOM2Q13796 1616 aa10.23□□□□□ -0.77
EPHA4-214ENST00000541600 NUP160Q12769 1436 aa10.23□□□□□ -0.77
EPHA4-214ENST00000541600 MAPKBP1O60336 1514 aa10.23□□□□□ -0.77
EPHA4-214ENST00000541600 TSPOAP1O95153 1857 aa10.22□□□□□ -0.77
EPHA4-214ENST00000541600 PRXQ9BXM0 1461 aa10.22□□□□□ -0.77
EPHA4-214ENST00000541600 STK25O00506 426 aa10.21□□□□□ -0.77
EPHA4-214ENST00000541600 VGFO15240 615 aaPredicted RBP10.2□□□□□ -0.78
EPHA4-214ENST00000541600 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
EPHA4-214ENST00000541600 CACNB1Q02641 598 aaPredicted RBP10.2□□□□□ -0.78
EPHA4-214ENST00000541600 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
EPHA4-214ENST00000541600 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
EPHA4-214ENST00000541600 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
EPHA4-214ENST00000541600 CLIP1P30622 1438 aa10.18□□□□□ -0.78
EPHA4-214ENST00000541600 VPS8Q8N3P4 1428 aa10.18□□□□□ -0.78
EPHA4-214ENST00000541600 PPRC1Q5VV67 1664 aaKnown RBP10.18□□□□□ -0.78
EPHA4-214ENST00000541600 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
EPHA4-214ENST00000541600 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
EPHA4-214ENST00000541600 ADCY10Q96PN6 1610 aa10.17□□□□□ -0.78
EPHA4-214ENST00000541600 CUX1P39880 1505 aa10.17□□□□□ -0.78
EPHA4-214ENST00000541600 SGIP1Q9BQI5 828 aa10.16□□□□□ -0.78
EPHA4-214ENST00000541600 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
EPHA4-214ENST00000541600 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-214ENST00000541600 PBRM1Q86U86 1689 aa10.15□□□□□ -0.79
EPHA4-214ENST00000541600 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
EPHA4-214ENST00000541600 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
EPHA4-214ENST00000541600 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
EPHA4-214ENST00000541600 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
EPHA4-214ENST00000541600 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
EPHA4-214ENST00000541600 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
EPHA4-214ENST00000541600 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
EPHA4-214ENST00000541600 ABCA5Q8WWZ7 1642 aa10.1□□□□□ -0.79
EPHA4-214ENST00000541600 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
EPHA4-214ENST00000541600 STK24Q9Y6E0 443 aa10.09□□□□□ -0.79
EPHA4-214ENST00000541600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-214ENST00000541600 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
EPHA4-214ENST00000541600 CCER1Q8TC90 406 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-214ENST00000541600 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-214ENST00000541600 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
EPHA4-214ENST00000541600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
EPHA4-214ENST00000541600 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
EPHA4-214ENST00000541600 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
EPHA4-214ENST00000541600 ABCA10Q8WWZ4 1543 aa10.05□□□□□ -0.8
EPHA4-214ENST00000541600 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-214ENST00000541600 IGF1RP08069 1367 aa10.03□□□□□ -0.8
EPHA4-214ENST00000541600 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
EPHA4-214ENST00000541600 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
EPHA4-214ENST00000541600 CLSPNQ9HAW4 1339 aa10.03□□□□□ -0.8
EPHA4-214ENST00000541600 GLI2P10070 1586 aa10.01□□□□□ -0.81
EPHA4-214ENST00000541600 SPATA31D1Q6ZQQ2 1576 aa10.01□□□□□ -0.81
EPHA4-214ENST00000541600 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
EPHA4-214ENST00000541600 FHAD1B1AJZ9 1412 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 ASXL2Q76L83 1435 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 PTPRMP28827 1452 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 HSPA2P54652 639 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 RASEFQ8IZ41 740 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 WDR70Q9NW82 654 aa10□□□□□ -0.81
EPHA4-214ENST00000541600 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-214ENST00000541600 RRBP1Q9P2E9 1410 aaKnown RBP9.99□□□□□ -0.81
EPHA4-214ENST00000541600 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
EPHA4-214ENST00000541600 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
EPHA4-214ENST00000541600 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
EPHA4-214ENST00000541600 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
EPHA4-214ENST00000541600 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.82
EPHA4-214ENST00000541600 PYGBP11216 843 aa9.95□□□□□ -0.82
EPHA4-214ENST00000541600 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
EPHA4-214ENST00000541600 EPRSP07814 1512 aaKnown RBP9.94□□□□□ -0.82
EPHA4-214ENST00000541600 ADAMTSL3P82987 1691 aa9.93□□□□□ -0.82
EPHA4-214ENST00000541600 ABCC2Q92887 1545 aa9.92□□□□□ -0.82
EPHA4-214ENST00000541600 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
EPHA4-214ENST00000541600 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
EPHA4-214ENST00000541600 CUL7Q14999 1698 aa9.91□□□□□ -0.82
EPHA4-214ENST00000541600 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-214ENST00000541600 TTBK1Q5TCY1 1321 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-214ENST00000541600 MYT1Q01538 1121 aa9.9□□□□□ -0.82
EPHA4-214ENST00000541600 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
EPHA4-214ENST00000541600 DIEXFQ68CQ4 756 aaKnown RBP9.89□□□□□ -0.83
EPHA4-214ENST00000541600 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
EPHA4-214ENST00000541600 PTPRGP23470 1445 aa9.89□□□□□ -0.83
EPHA4-214ENST00000541600 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
EPHA4-214ENST00000541600 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-214ENST00000541600 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
EPHA4-214ENST00000541600 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
EPHA4-214ENST00000541600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.83
EPHA4-214ENST00000541600 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms