RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
LMO3-225ENST00000541295 NEFMP07197 916 aa8.38□□□□□ -1.07
LMO3-225ENST00000541295 KDM2AQ9Y2K7 1162 aa8.38□□□□□ -1.07
LMO3-225ENST00000541295 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
LMO3-225ENST00000541295 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
LMO3-225ENST00000541295 VPS8Q8N3P4 1428 aa8.35□□□□□ -1.07
LMO3-225ENST00000541295 NPM1P06748 294 aaKnown RBP eCLIP8.35□□□□□ -1.07
LMO3-225ENST00000541295 MRC2Q9UBG0 1479 aa8.35□□□□□ -1.07
LMO3-225ENST00000541295 GAPVD1Q14C86 1478 aa8.34□□□□□ -1.07
LMO3-225ENST00000541295 FBLN2P98095 1184 aa8.34□□□□□ -1.07
LMO3-225ENST00000541295 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
LMO3-225ENST00000541295 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
LMO3-225ENST00000541295 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
LMO3-225ENST00000541295 AQRO60306 1485 aaKnown RBP eCLIP8.33□□□□□ -1.08
LMO3-225ENST00000541295 SETQ01105 290 aaPredicted RBP8.32□□□□□ -1.08
LMO3-225ENST00000541295 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
LMO3-225ENST00000541295 HSP90AA2PQ14568 343 aaPredicted RBP8.32□□□□□ -1.08
LMO3-225ENST00000541295 MCCP23508 829 aa8.31□□□□□ -1.08
LMO3-225ENST00000541295 FAM193AP78312 1265 aa8.31□□□□□ -1.08
LMO3-225ENST00000541295 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
LMO3-225ENST00000541295 HNRNPUL2Q1KMD3 747 aaKnown RBP8.3□□□□□ -1.08
LMO3-225ENST00000541295 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
LMO3-225ENST00000541295 ARHGAP35Q9NRY4 1499 aa8.3□□□□□ -1.08
LMO3-225ENST00000541295 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
LMO3-225ENST00000541295 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
LMO3-225ENST00000541295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
LMO3-225ENST00000541295 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
LMO3-225ENST00000541295 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
LMO3-225ENST00000541295 CLGNO14967 610 aa8.28□□□□□ -1.08
LMO3-225ENST00000541295 ABCA5Q8WWZ7 1642 aa8.28□□□□□ -1.08
LMO3-225ENST00000541295 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
LMO3-225ENST00000541295 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
LMO3-225ENST00000541295 CUL7Q14999 1698 aa8.28□□□□□ -1.08
LMO3-225ENST00000541295 NBR1Q14596 966 aa8.27□□□□□ -1.08
LMO3-225ENST00000541295 TARBP1Q13395 1621 aaKnown RBP8.27□□□□□ -1.08
LMO3-225ENST00000541295 OS9Q13438 667 aaPredicted RBP8.27□□□□□ -1.09
LMO3-225ENST00000541295 KANK4Q5T7N3 995 aaPredicted RBP8.27□□□□□ -1.09
LMO3-225ENST00000541295 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
LMO3-225ENST00000541295 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
LMO3-225ENST00000541295 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
LMO3-225ENST00000541295 WDR62O43379 1518 aa8.25□□□□□ -1.09
LMO3-225ENST00000541295 IFT140Q96RY7 1462 aa8.25□□□□□ -1.09
LMO3-225ENST00000541295 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
LMO3-225ENST00000541295 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
LMO3-225ENST00000541295 ANP32BQ92688 251 aaKnown RBP8.25□□□□□ -1.09
LMO3-225ENST00000541295 ANAPC15P60006 121 aa8.24□□□□□ -1.09
LMO3-225ENST00000541295 ARID3CA6NKF2 412 aa8.24□□□□□ -1.09
LMO3-225ENST00000541295 ITGAEP38570 1179 aa8.24□□□□□ -1.09
LMO3-225ENST00000541295 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
LMO3-225ENST00000541295 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
LMO3-225ENST00000541295 GRIN2BQ13224 1484 aa8.24□□□□□ -1.09
LMO3-225ENST00000541295 CC2D2BQ6DHV5 1058 aa8.23□□□□□ -1.09
LMO3-225ENST00000541295 PBRM1Q86U86 1689 aa8.23□□□□□ -1.09
LMO3-225ENST00000541295 APPP05067 770 aa8.23□□□□□ -1.09
LMO3-225ENST00000541295 USP35Q9P2H5 1018 aa8.23□□□□□ -1.09
LMO3-225ENST00000541295 STAC3Q96MF2 364 aa8.23□□□□□ -1.09
LMO3-225ENST00000541295 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
LMO3-225ENST00000541295 THOC2Q8NI27 1593 aaKnown RBP8.22□□□□□ -1.09
LMO3-225ENST00000541295 SNAPC4Q5SXM2 1469 aa8.22□□□□□ -1.09
LMO3-225ENST00000541295 FHAD1B1AJZ9 1412 aa8.22□□□□□ -1.09
LMO3-225ENST00000541295 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.09
LMO3-225ENST00000541295 CTTNBP2Q8WZ74 1663 aa8.22□□□□□ -1.09
LMO3-225ENST00000541295 PRDM16Q9HAZ2 1276 aa8.22□□□□□ -1.09
LMO3-225ENST00000541295 FKBP8Q14318 412 aa8.21□□□□□ -1.09
LMO3-225ENST00000541295 FOXD1Q16676 465 aa8.21□□□□□ -1.09
LMO3-225ENST00000541295 FANCIQ9NVI1 1328 aa8.21□□□□□ -1.1
LMO3-225ENST00000541295 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
LMO3-225ENST00000541295 DNAJC2Q99543 621 aaKnown RBP8.2□□□□□ -1.1
LMO3-225ENST00000541295 EIF4G3O43432 1585 aaKnown RBP8.2□□□□□ -1.1
LMO3-225ENST00000541295 ADAMTS12P58397 1594 aa8.2□□□□□ -1.1
LMO3-225ENST00000541295 PHF14O94880 888 aa8.19□□□□□ -1.1
LMO3-225ENST00000541295 CALD1Q05682 793 aaKnown RBP8.19□□□□□ -1.1
LMO3-225ENST00000541295 KCNG1Q9UIX4 513 aa8.19□□□□□ -1.1
LMO3-225ENST00000541295 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
LMO3-225ENST00000541295 HSP90AA1P07900 732 aaKnown RBP8.19□□□□□ -1.1
LMO3-225ENST00000541295 AXDND1Q5T1B0 1012 aaPredicted RBP8.18□□□□□ -1.1
LMO3-225ENST00000541295 EFCAB5A4FU69 1503 aa8.17□□□□□ -1.1
LMO3-225ENST00000541295 RAD21O60216 631 aa8.17□□□□□ -1.1
LMO3-225ENST00000541295 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
LMO3-225ENST00000541295 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
LMO3-225ENST00000541295 PLCD3Q8N3E9 789 aa8.16□□□□□ -1.1
LMO3-225ENST00000541295 ZNF316A6NFI3 1004 aaPredicted RBP8.16□□□□□ -1.1
LMO3-225ENST00000541295 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
LMO3-225ENST00000541295 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
LMO3-225ENST00000541295 FMN1Q68DA7 1419 aa8.15□□□□□ -1.1
LMO3-225ENST00000541295 TIAM1Q13009 1591 aa8.15□□□□□ -1.1
LMO3-225ENST00000541295 IQGAP2Q13576 1575 aa8.15□□□□□ -1.1
LMO3-225ENST00000541295 CCDC27Q2M243 656 aa8.15□□□□□ -1.11
LMO3-225ENST00000541295 GRIN2AQ12879 1464 aa8.14□□□□□ -1.11
LMO3-225ENST00000541295 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
LMO3-225ENST00000541295 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
LMO3-225ENST00000541295 MTUS2Q5JR59 1369 aa8.14□□□□□ -1.11
LMO3-225ENST00000541295 HDAC5Q9UQL6 1122 aa8.14□□□□□ -1.11
LMO3-225ENST00000541295 MSH5O43196 834 aa8.13□□□□□ -1.11
LMO3-225ENST00000541295 LRRC9Q6ZRR7 1453 aa8.13□□□□□ -1.11
LMO3-225ENST00000541295 CASKIN1Q8WXD9 1431 aa8.13□□□□□ -1.11
LMO3-225ENST00000541295 VGFO15240 615 aaPredicted RBP8.13□□□□□ -1.11
LMO3-225ENST00000541295 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
LMO3-225ENST00000541295 KCTD17Q8N5Z5 321 aa8.13□□□□□ -1.11
LMO3-225ENST00000541295 FYCO1Q9BQS8 1478 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms