RNA–Protein interactions for RNA: ENST00000541087.1

MDM1-212, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-212ENST00000541087 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
MDM1-212ENST00000541087 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
MDM1-212ENST00000541087 SAMD9Q5K651 1589 aa16.4■□□□□ 0.22
MDM1-212ENST00000541087 HECW1Q76N89 1606 aa16.4■□□□□ 0.22
MDM1-212ENST00000541087 UHRF1BP1Q6BDS2 1440 aa16.39■□□□□ 0.21
MDM1-212ENST00000541087 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
MDM1-212ENST00000541087 PTPRTO14522 1441 aa16.38■□□□□ 0.21
MDM1-212ENST00000541087 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
MDM1-212ENST00000541087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.38■□□□□ 0.21
MDM1-212ENST00000541087 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
MDM1-212ENST00000541087 ATP10AO60312 1499 aa16.36■□□□□ 0.21
MDM1-212ENST00000541087 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
MDM1-212ENST00000541087 SCAPERQ9BY12 1400 aa16.33■□□□□ 0.2
MDM1-212ENST00000541087 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
MDM1-212ENST00000541087 PLCH2O75038 1416 aa16.28■□□□□ 0.2
MDM1-212ENST00000541087 C3P01024 1663 aa16.25■□□□□ 0.19
MDM1-212ENST00000541087 EFCAB2Q5VUJ9 269 aa16.24■□□□□ 0.19
MDM1-212ENST00000541087 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
MDM1-212ENST00000541087 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
MDM1-212ENST00000541087 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
MDM1-212ENST00000541087 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
MDM1-212ENST00000541087 MYO5CQ9NQX4 1742 aa16.22■□□□□ 0.19
MDM1-212ENST00000541087 UBAP1LF5GYI3 381 aa16.21■□□□□ 0.19
MDM1-212ENST00000541087 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
MDM1-212ENST00000541087 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
MDM1-212ENST00000541087 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
MDM1-212ENST00000541087 KDM5CP41229 1560 aa16.18■□□□□ 0.18
MDM1-212ENST00000541087 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
MDM1-212ENST00000541087 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
MDM1-212ENST00000541087 AGLP35573 1532 aa16.16■□□□□ 0.18
MDM1-212ENST00000541087 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
MDM1-212ENST00000541087 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
MDM1-212ENST00000541087 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
MDM1-212ENST00000541087 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
MDM1-212ENST00000541087 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
MDM1-212ENST00000541087 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
MDM1-212ENST00000541087 ARHGAP5Q13017 1502 aa16.12■□□□□ 0.17
MDM1-212ENST00000541087 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
MDM1-212ENST00000541087 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
MDM1-212ENST00000541087 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
MDM1-212ENST00000541087 NPATQ14207 1427 aa16.11■□□□□ 0.17
MDM1-212ENST00000541087 PKD2Q13563 968 aa16.1■□□□□ 0.17
MDM1-212ENST00000541087 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
MDM1-212ENST00000541087 KIF14Q15058 1648 aa16.08■□□□□ 0.17
MDM1-212ENST00000541087 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
MDM1-212ENST00000541087 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.16
MDM1-212ENST00000541087 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
MDM1-212ENST00000541087 HSPA1LP34931 641 aa16.06■□□□□ 0.16
MDM1-212ENST00000541087 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
MDM1-212ENST00000541087 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
MDM1-212ENST00000541087 TOM1O60784 492 aa16.04■□□□□ 0.16
MDM1-212ENST00000541087 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
MDM1-212ENST00000541087 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
MDM1-212ENST00000541087 CLIP1P30622 1438 aa16.03■□□□□ 0.16
MDM1-212ENST00000541087 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
MDM1-212ENST00000541087 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
MDM1-212ENST00000541087 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.16
MDM1-212ENST00000541087 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
MDM1-212ENST00000541087 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
MDM1-212ENST00000541087 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.15
MDM1-212ENST00000541087 EEA1Q15075 1411 aa16.02■□□□□ 0.15
MDM1-212ENST00000541087 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
MDM1-212ENST00000541087 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
MDM1-212ENST00000541087 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
MDM1-212ENST00000541087 MYO3AQ8NEV4 1616 aa16■□□□□ 0.15
MDM1-212ENST00000541087 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
MDM1-212ENST00000541087 ABCC1P33527 1531 aa15.99■□□□□ 0.15
MDM1-212ENST00000541087 CPS1P31327 1500 aa15.97■□□□□ 0.15
MDM1-212ENST00000541087 PREX2Q70Z35 1606 aa15.97■□□□□ 0.15
MDM1-212ENST00000541087 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
MDM1-212ENST00000541087 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
MDM1-212ENST00000541087 SAMD9LQ8IVG5 1584 aa15.91■□□□□ 0.14
MDM1-212ENST00000541087 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
MDM1-212ENST00000541087 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
MDM1-212ENST00000541087 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
MDM1-212ENST00000541087 LRRIQ1Q96JM4 1722 aa15.89■□□□□ 0.13
MDM1-212ENST00000541087 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
MDM1-212ENST00000541087 SPAG9O60271 1321 aaKnown RBP15.89■□□□□ 0.13
MDM1-212ENST00000541087 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
MDM1-212ENST00000541087 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
MDM1-212ENST00000541087 GGT6Q6P531 493 aa15.87■□□□□ 0.13
MDM1-212ENST00000541087 PLXNC1O60486 1568 aa15.86■□□□□ 0.13
MDM1-212ENST00000541087 A2MP01023 1474 aa15.85■□□□□ 0.13
MDM1-212ENST00000541087 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
MDM1-212ENST00000541087 NEURL4Q96JN8 1562 aa15.84■□□□□ 0.13
MDM1-212ENST00000541087 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
MDM1-212ENST00000541087 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
MDM1-212ENST00000541087 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
MDM1-212ENST00000541087 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
MDM1-212ENST00000541087 ANKLE2Q86XL3 938 aa15.82■□□□□ 0.12
MDM1-212ENST00000541087 ALKQ9UM73 1620 aa15.82■□□□□ 0.12
MDM1-212ENST00000541087 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
MDM1-212ENST00000541087 VWDEQ8N2E2 1590 aa15.81■□□□□ 0.12
MDM1-212ENST00000541087 INO80Q9ULG1 1556 aaPredicted RBP15.8■□□□□ 0.12
MDM1-212ENST00000541087 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
MDM1-212ENST00000541087 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
MDM1-212ENST00000541087 KIAA1107Q9UPP5 1409 aa15.78■□□□□ 0.12
MDM1-212ENST00000541087 TNRQ92752 1358 aa15.78■□□□□ 0.12
MDM1-212ENST00000541087 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
MDM1-212ENST00000541087 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms