RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.37
CACNB3-203ENST00000540990 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.37
CACNB3-203ENST00000540990 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
CACNB3-203ENST00000540990 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
CACNB3-203ENST00000540990 WASHC2AQ641Q2 1341 aa23.54■■□□□ 1.36
CACNB3-203ENST00000540990 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
CACNB3-203ENST00000540990 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
CACNB3-203ENST00000540990 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
CACNB3-203ENST00000540990 EIF4G2P78344 907 aaKnown RBP eCLIP23.53■■□□□ 1.36
CACNB3-203ENST00000540990 ADGRL2O95490 1459 aa23.52■■□□□ 1.36
CACNB3-203ENST00000540990 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
CACNB3-203ENST00000540990 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
CACNB3-203ENST00000540990 NUP160Q12769 1436 aa23.5■■□□□ 1.35
CACNB3-203ENST00000540990 ADGBQ8N7X0 1667 aa23.49■■□□□ 1.35
CACNB3-203ENST00000540990 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
CACNB3-203ENST00000540990 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
CACNB3-203ENST00000540990 TSHZ2Q9NRE2 1034 aa23.49■■□□□ 1.35
CACNB3-203ENST00000540990 GPATCH8Q9UKJ3 1502 aaKnown RBP23.49■■□□□ 1.35
CACNB3-203ENST00000540990 PZPP20742 1482 aa23.47■■□□□ 1.35
CACNB3-203ENST00000540990 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-203ENST00000540990 ZNF644Q9H582 1327 aaPredicted RBP23.47■■□□□ 1.35
CACNB3-203ENST00000540990 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
CACNB3-203ENST00000540990 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.35
CACNB3-203ENST00000540990 ARID3CA6NKF2 412 aa23.45■■□□□ 1.34
CACNB3-203ENST00000540990 FKBP8Q14318 412 aa23.45■■□□□ 1.34
CACNB3-203ENST00000540990 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
CACNB3-203ENST00000540990 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
CACNB3-203ENST00000540990 CCDC7Q96M83 1385 aa23.43■■□□□ 1.34
CACNB3-203ENST00000540990 POLR1AO95602 1720 aaPredicted RBP23.42■■□□□ 1.34
CACNB3-203ENST00000540990 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
CACNB3-203ENST00000540990 KIF14Q15058 1648 aa23.41■■□□□ 1.34
CACNB3-203ENST00000540990 NEFLP07196 543 aa23.4■■□□□ 1.34
CACNB3-203ENST00000540990 ABCA8O94911 1581 aa23.39■■□□□ 1.34
CACNB3-203ENST00000540990 FOXD1Q16676 465 aa23.39■■□□□ 1.33
CACNB3-203ENST00000540990 NBPF8Q3BBV2 869 aa23.39■■□□□ 1.33
CACNB3-203ENST00000540990 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
CACNB3-203ENST00000540990 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
CACNB3-203ENST00000540990 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
CACNB3-203ENST00000540990 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
CACNB3-203ENST00000540990 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
CACNB3-203ENST00000540990 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
CACNB3-203ENST00000540990 ABCC10Q5T3U5 1492 aa23.35■■□□□ 1.33
CACNB3-203ENST00000540990 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.33
CACNB3-203ENST00000540990 C11orf95C9JLR9 678 aaPredicted RBP23.33■■□□□ 1.33
CACNB3-203ENST00000540990 JPH4Q96JJ6 628 aa23.33■■□□□ 1.32
CACNB3-203ENST00000540990 KDM5DQ9BY66 1539 aa23.31■■□□□ 1.32
CACNB3-203ENST00000540990 PRKRIP1Q9H875 184 aaPredicted RBP23.3■■□□□ 1.32
CACNB3-203ENST00000540990 CDC42BPAQ5VT25 1732 aa23.3■■□□□ 1.32
CACNB3-203ENST00000540990 BCANQ96GW7 911 aa23.28■■□□□ 1.32
CACNB3-203ENST00000540990 ATP10BO94823 1461 aa23.27■■□□□ 1.32
CACNB3-203ENST00000540990 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
CACNB3-203ENST00000540990 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
CACNB3-203ENST00000540990 KIF7Q2M1P5 1343 aa23.26■■□□□ 1.31
CACNB3-203ENST00000540990 UHRF1BP1Q6BDS2 1440 aa23.25■■□□□ 1.31
CACNB3-203ENST00000540990 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
CACNB3-203ENST00000540990 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
CACNB3-203ENST00000540990 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
CACNB3-203ENST00000540990 ARID4BQ4LE39 1312 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-203ENST00000540990 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
CACNB3-203ENST00000540990 PTPRGP23470 1445 aa23.22■■□□□ 1.31
CACNB3-203ENST00000540990 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
CACNB3-203ENST00000540990 KDM5CP41229 1560 aa23.18■■□□□ 1.3
CACNB3-203ENST00000540990 PKD2Q13563 968 aa23.18■■□□□ 1.3
CACNB3-203ENST00000540990 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
CACNB3-203ENST00000540990 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
CACNB3-203ENST00000540990 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
CACNB3-203ENST00000540990 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
CACNB3-203ENST00000540990 USP47Q96K76 1375 aa23.15■■□□□ 1.3
CACNB3-203ENST00000540990 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
CACNB3-203ENST00000540990 BCORL1Q5H9F3 1711 aa23.14■■□□□ 1.3
CACNB3-203ENST00000540990 FBLN2P98095 1184 aa23.13■■□□□ 1.29
CACNB3-203ENST00000540990 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
CACNB3-203ENST00000540990 NUP155O75694 1391 aa23.11■■□□□ 1.29
CACNB3-203ENST00000540990 PREX2Q70Z35 1606 aa23.09■■□□□ 1.29
CACNB3-203ENST00000540990 ROCK2O75116 1388 aaKnown RBP23.09■■□□□ 1.29
CACNB3-203ENST00000540990 CCDC141Q6ZP82 1450 aa23.08■■□□□ 1.28
CACNB3-203ENST00000540990 SAMD9LQ8IVG5 1584 aa23.07■■□□□ 1.28
CACNB3-203ENST00000540990 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
CACNB3-203ENST00000540990 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
CACNB3-203ENST00000540990 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
CACNB3-203ENST00000540990 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
CACNB3-203ENST00000540990 MAST1Q9Y2H9 1570 aa23.06■■□□□ 1.28
CACNB3-203ENST00000540990 CDC42BPBQ9Y5S2 1711 aa23.05■■□□□ 1.28
CACNB3-203ENST00000540990 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
CACNB3-203ENST00000540990 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
CACNB3-203ENST00000540990 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
CACNB3-203ENST00000540990 FAM135AQ9P2D6 1515 aa22.99■■□□□ 1.27
CACNB3-203ENST00000540990 UNC13BO14795 1591 aa22.99■■□□□ 1.27
CACNB3-203ENST00000540990 ANP32EQ9BTT0 268 aa22.98■■□□□ 1.27
CACNB3-203ENST00000540990 PPP4R2Q9NY27 417 aa22.98■■□□□ 1.27
CACNB3-203ENST00000540990 SMG6Q86US8 1419 aaKnown RBP22.97■■□□□ 1.27
CACNB3-203ENST00000540990 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
CACNB3-203ENST00000540990 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.27
CACNB3-203ENST00000540990 E9PCH4 1651 aa22.94■■□□□ 1.26
CACNB3-203ENST00000540990 PLXNC1O60486 1568 aa22.94■■□□□ 1.26
CACNB3-203ENST00000540990 CARD11Q9BXL7 1154 aa22.93■■□□□ 1.26
CACNB3-203ENST00000540990 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
CACNB3-203ENST00000540990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
CACNB3-203ENST00000540990 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
CACNB3-203ENST00000540990 LAMC1P11047 1609 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms