RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
LCOR-209ENST00000540664 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
LCOR-209ENST00000540664 ACIN1Q9UKV3 1341 aaKnown RBP13.81□□□□□ -0.2
LCOR-209ENST00000540664 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
LCOR-209ENST00000540664 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
LCOR-209ENST00000540664 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
LCOR-209ENST00000540664 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
LCOR-209ENST00000540664 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
LCOR-209ENST00000540664 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
LCOR-209ENST00000540664 PTPRGP23470 1445 aa13.79□□□□□ -0.2
LCOR-209ENST00000540664 CDC42BPAQ5VT25 1732 aa13.79□□□□□ -0.2
LCOR-209ENST00000540664 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
LCOR-209ENST00000540664 ADGBQ8N7X0 1667 aa13.78□□□□□ -0.2
LCOR-209ENST00000540664 KDM5BQ9UGL1 1544 aa13.78□□□□□ -0.2
LCOR-209ENST00000540664 ADGRL2O95490 1459 aa13.77□□□□□ -0.21
LCOR-209ENST00000540664 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
LCOR-209ENST00000540664 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
LCOR-209ENST00000540664 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
LCOR-209ENST00000540664 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
LCOR-209ENST00000540664 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
LCOR-209ENST00000540664 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
LCOR-209ENST00000540664 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
LCOR-209ENST00000540664 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
LCOR-209ENST00000540664 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
LCOR-209ENST00000540664 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
LCOR-209ENST00000540664 TRIM52Q96A61 297 aa13.69□□□□□ -0.22
LCOR-209ENST00000540664 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
LCOR-209ENST00000540664 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
LCOR-209ENST00000540664 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
LCOR-209ENST00000540664 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
LCOR-209ENST00000540664 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
LCOR-209ENST00000540664 PZPP20742 1482 aa13.67□□□□□ -0.22
LCOR-209ENST00000540664 ANKRD30AQ9BXX3 1397 aa13.66□□□□□ -0.22
LCOR-209ENST00000540664 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
LCOR-209ENST00000540664 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
LCOR-209ENST00000540664 SAMD9LQ8IVG5 1584 aa13.64□□□□□ -0.23
LCOR-209ENST00000540664 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
LCOR-209ENST00000540664 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
LCOR-209ENST00000540664 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
LCOR-209ENST00000540664 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
LCOR-209ENST00000540664 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
LCOR-209ENST00000540664 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
LCOR-209ENST00000540664 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
LCOR-209ENST00000540664 TEX14Q8IWB6 1497 aa13.61□□□□□ -0.23
LCOR-209ENST00000540664 ZCCHC11Q5TAX3 1644 aaKnown RBP13.61□□□□□ -0.23
LCOR-209ENST00000540664 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
LCOR-209ENST00000540664 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
LCOR-209ENST00000540664 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
LCOR-209ENST00000540664 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
LCOR-209ENST00000540664 FOXD1Q16676 465 aa13.59□□□□□ -0.23
LCOR-209ENST00000540664 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
LCOR-209ENST00000540664 KIAA1107Q9UPP5 1409 aa13.58□□□□□ -0.24
LCOR-209ENST00000540664 RSPH4AQ5TD94 716 aa13.58□□□□□ -0.24
LCOR-209ENST00000540664 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
LCOR-209ENST00000540664 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
LCOR-209ENST00000540664 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
LCOR-209ENST00000540664 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
LCOR-209ENST00000540664 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■□□ 16.9
LCOR-209ENST00000540664 KIF15Q9NS87 1388 aa13.55□□□□□ -0.24
LCOR-209ENST00000540664 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
LCOR-209ENST00000540664 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
LCOR-209ENST00000540664 PLEKHH2Q8IVE3 1493 aa13.55□□□□□ -0.24
LCOR-209ENST00000540664 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
LCOR-209ENST00000540664 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
LCOR-209ENST00000540664 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
LCOR-209ENST00000540664 OSCARQ8IYS5 282 aa13.52□□□□□ -0.24
LCOR-209ENST00000540664 PLCH2O75038 1416 aa13.52□□□□□ -0.25
LCOR-209ENST00000540664 PKD2Q13563 968 aa13.51□□□□□ -0.25
LCOR-209ENST00000540664 ARAP3Q8WWN8 1544 aa13.51□□□□□ -0.25
LCOR-209ENST00000540664 UNC13BO14795 1591 aa13.5□□□□□ -0.25
LCOR-209ENST00000540664 NUP155O75694 1391 aa13.5□□□□□ -0.25
LCOR-209ENST00000540664 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
LCOR-209ENST00000540664 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
LCOR-209ENST00000540664 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
LCOR-209ENST00000540664 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
LCOR-209ENST00000540664 ABCC1P33527 1531 aa13.48□□□□□ -0.25
LCOR-209ENST00000540664 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
LCOR-209ENST00000540664 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
LCOR-209ENST00000540664 FAM135AQ9P2D6 1515 aa13.47□□□□□ -0.25
LCOR-209ENST00000540664 CCER2I3L3R5 266 aa13.47□□□□□ -0.25
LCOR-209ENST00000540664 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.25
LCOR-209ENST00000540664 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
LCOR-209ENST00000540664 UHRF1BP1Q6BDS2 1440 aa13.46□□□□□ -0.25
LCOR-209ENST00000540664 MAGI2Q86UL8 1455 aa13.45□□□□□ -0.26
LCOR-209ENST00000540664 WDR7Q9Y4E6 1490 aa13.45□□□□□ -0.26
LCOR-209ENST00000540664 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
LCOR-209ENST00000540664 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
LCOR-209ENST00000540664 ANP32CO43423 234 aa13.43□□□□□ -0.26
LCOR-209ENST00000540664 EFCAB2Q5VUJ9 269 aa13.43□□□□□ -0.26
LCOR-209ENST00000540664 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
LCOR-209ENST00000540664 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
LCOR-209ENST00000540664 CCDC7Q96M83 1385 aa13.41□□□□□ -0.26
LCOR-209ENST00000540664 RALGAPBQ86X10 1494 aa13.4□□□□□ -0.26
LCOR-209ENST00000540664 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
LCOR-209ENST00000540664 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
LCOR-209ENST00000540664 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
LCOR-209ENST00000540664 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
LCOR-209ENST00000540664 KDM5CP41229 1560 aa13.39□□□□□ -0.27
LCOR-209ENST00000540664 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
LCOR-209ENST00000540664 ATP10AO60312 1499 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms