RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 BCL11BQ9C0K0 894 aaPredicted RBP7.97□□□□□ -1.13
TSG101-205ENST00000540555 ATN1P54259 1190 aaPredicted RBP7.96□□□□□ -1.14
TSG101-205ENST00000540555 SCUBE2Q9NQ36 999 aa7.96□□□□□ -1.14
TSG101-205ENST00000540555 TIE1P35590 1138 aa7.95□□□□□ -1.14
TSG101-205ENST00000540555 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
TSG101-205ENST00000540555 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
TSG101-205ENST00000540555 NKX1-1Q15270 411 aaPredicted RBP7.93□□□□□ -1.14
TSG101-205ENST00000540555 URB2Q14146 1524 aaKnown RBP7.93□□□□□ -1.14
TSG101-205ENST00000540555 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
TSG101-205ENST00000540555 POTEFA5A3E0 1075 aa7.91□□□□□ -1.14
TSG101-205ENST00000540555 ZNF608Q9ULD9 1512 aaPredicted RBP7.9□□□□□ -1.14
TSG101-205ENST00000540555 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
TSG101-205ENST00000540555 TMEM106CQ9BVX2 250 aa7.9□□□□□ -1.14
TSG101-205ENST00000540555 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
TSG101-205ENST00000540555 TTLL13PA6NNM8 815 aa7.89□□□□□ -1.15
TSG101-205ENST00000540555 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
TSG101-205ENST00000540555 CFTRP13569 1480 aa7.88□□□□□ -1.15
TSG101-205ENST00000540555 IER5LQ5T953 404 aa7.88□□□□□ -1.15
TSG101-205ENST00000540555 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
TSG101-205ENST00000540555 GTPBP6O43824 516 aaPredicted RBP7.86□□□□□ -1.15
TSG101-205ENST00000540555 PAXIP1Q6ZW49 1069 aaPredicted RBP7.86□□□□□ -1.15
TSG101-205ENST00000540555 CDAN1Q8IWY9 1227 aa7.86□□□□□ -1.15
TSG101-205ENST00000540555 EFCAB3Q8N7B9 438 aa7.85□□□□□ -1.15
TSG101-205ENST00000540555 SPRYD3Q8NCJ5 442 aa7.85□□□□□ -1.15
TSG101-205ENST00000540555 KDM4FA0A1W2PPD8 638 aa7.84□□□□□ -1.15
TSG101-205ENST00000540555 CFAP44Q96MT7 982 aa7.83□□□□□ -1.16
TSG101-205ENST00000540555 MFRPQ9BY79 579 aa7.83□□□□□ -1.16
TSG101-205ENST00000540555 MROH2BQ7Z745 1585 aa7.83□□□□□ -1.16
TSG101-205ENST00000540555 TRIM35Q9UPQ4 493 aa7.82□□□□□ -1.16
TSG101-205ENST00000540555 COLQQ9Y215 455 aaPredicted RBP7.82□□□□□ -1.16
TSG101-205ENST00000540555 SOX12O15370 315 aa7.81□□□□□ -1.16
TSG101-205ENST00000540555 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
TSG101-205ENST00000540555 SEC24BO95487 1268 aa7.81□□□□□ -1.16
TSG101-205ENST00000540555 FBXO22Q8NEZ5 403 aa7.81□□□□□ -1.16
TSG101-205ENST00000540555 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
TSG101-205ENST00000540555 PHF8Q9UPP1 1060 aa7.8□□□□□ -1.16
TSG101-205ENST00000540555 GOLGA2Q08379 1002 aa7.78□□□□□ -1.16
TSG101-205ENST00000540555 EIF4G3O43432 1585 aaKnown RBP7.78□□□□□ -1.16
TSG101-205ENST00000540555 NLRP6P59044 892 aa7.77□□□□□ -1.17
TSG101-205ENST00000540555 MKRN3Q13064 507 aaKnown RBP7.77□□□□□ -1.17
TSG101-205ENST00000540555 MS4A4AQ96JQ5 239 aa7.77□□□□□ -1.17
TSG101-205ENST00000540555 RYDENQ9NUL5 291 aaKnown RBP7.76□□□□□ -1.17
TSG101-205ENST00000540555 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.17
TSG101-205ENST00000540555 PPP1R37O75864 691 aa7.75□□□□□ -1.17
TSG101-205ENST00000540555 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
TSG101-205ENST00000540555 FBXO41Q8TF61 875 aa7.75□□□□□ -1.17
TSG101-205ENST00000540555 TSHZ2Q9NRE2 1034 aa7.75□□□□□ -1.17
TSG101-205ENST00000540555 GAPVD1Q14C86 1478 aa7.75□□□□□ -1.17
TSG101-205ENST00000540555 IRX5P78411 483 aaPredicted RBP7.74□□□□□ -1.17
TSG101-205ENST00000540555 CHD1O14646 1710 aa7.74□□□□□ -1.17
TSG101-205ENST00000540555 ST18O60284 1047 aa7.73□□□□□ -1.17
TSG101-205ENST00000540555 PDCD7Q8N8D1 485 aaKnown RBP7.73□□□□□ -1.17
TSG101-205ENST00000540555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.73□□□□□ -1.174e-7■□□□□ 9.1
TSG101-205ENST00000540555 TOPBP1Q92547 1522 aa7.73□□□□□ -1.17
TSG101-205ENST00000540555 ERCC6L2Q5T890 1561 aa7.72□□□□□ -1.17
TSG101-205ENST00000540555 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
TSG101-205ENST00000540555 ABCC8Q09428 1581 aa7.71□□□□□ -1.18
TSG101-205ENST00000540555 SLAIN1Q8ND83 568 aa7.7□□□□□ -1.18
TSG101-205ENST00000540555 TARBP1Q13395 1621 aaKnown RBP7.7□□□□□ -1.18
TSG101-205ENST00000540555 SYNJ1O43426 1573 aa7.69□□□□□ -1.18
TSG101-205ENST00000540555 MMRN1Q13201 1228 aa7.69□□□□□ -1.18
TSG101-205ENST00000540555 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
TSG101-205ENST00000540555 SOCS7O14512 581 aa7.68□□□□□ -1.18
TSG101-205ENST00000540555 PLCG2P16885 1265 aa7.68□□□□□ -1.18
TSG101-205ENST00000540555 TMEM121BQ9BXQ6 578 aaPredicted RBP7.68□□□□□ -1.18
TSG101-205ENST00000540555 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
TSG101-205ENST00000540555 SPNS2Q8IVW8 549 aa7.67□□□□□ -1.18
TSG101-205ENST00000540555 LMTK3Q96Q04 1460 aa7.67□□□□□ -1.18
TSG101-205ENST00000540555 SNPHO15079 494 aa7.66□□□□□ -1.18
TSG101-205ENST00000540555 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
TSG101-205ENST00000540555 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
TSG101-205ENST00000540555 SNAPC4Q5SXM2 1469 aa7.65□□□□□ -1.18
TSG101-205ENST00000540555 CHMP7Q8WUX9 453 aaPredicted RBP7.65□□□□□ -1.18
TSG101-205ENST00000540555 MAGI1Q96QZ7 1491 aaPredicted RBP7.65□□□□□ -1.18
TSG101-205ENST00000540555 HECW2Q9P2P5 1572 aa7.64□□□□□ -1.19
TSG101-205ENST00000540555 DNMBPQ6XZF7 1577 aa7.63□□□□□ -1.19
TSG101-205ENST00000540555 SYNJ2O15056 1496 aa7.63□□□□□ -1.19
TSG101-205ENST00000540555 ABCC10Q5T3U5 1492 aa7.63□□□□□ -1.19
TSG101-205ENST00000540555 WDR97A6NE52 1622 aa7.63□□□□□ -1.19
TSG101-205ENST00000540555 POLA1P09884 1462 aaPredicted RBP7.62□□□□□ -1.19
TSG101-205ENST00000540555 TDRD9Q8NDG6 1382 aaKnown RBP7.61□□□□□ -1.19
TSG101-205ENST00000540555 WIZO95785 1651 aa7.61□□□□□ -1.19
TSG101-205ENST00000540555 MICALL2Q8IY33 904 aa7.61□□□□□ -1.19
TSG101-205ENST00000540555 KIF13AQ9H1H9 1805 aa7.6□□□□□ -1.19
TSG101-205ENST00000540555 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.6□□□□□ -1.19
TSG101-205ENST00000540555 BOLA1Q9Y3E2 137 aa7.6□□□□□ -1.19
TSG101-205ENST00000540555 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
TSG101-205ENST00000540555 ADGRL1O94910 1474 aa7.59□□□□□ -1.19
TSG101-205ENST00000540555 NCKAP5LQ9HCH0 1330 aa7.58□□□□□ -1.2
TSG101-205ENST00000540555 GRIN2BQ13224 1484 aa7.58□□□□□ -1.2
TSG101-205ENST00000540555 ILDR2Q71H61 639 aa7.58□□□□□ -1.2
TSG101-205ENST00000540555 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
TSG101-205ENST00000540555 TOP2AP11388 1531 aaKnown RBP7.57□□□□□ -1.2
TSG101-205ENST00000540555 RAD54L2Q9Y4B4 1467 aa7.57□□□□□ -1.2
TSG101-205ENST00000540555 KDM6BO15054 1643 aa7.57□□□□□ -1.2
TSG101-205ENST00000540555 CRISPLD2Q9H0B8 497 aa7.57□□□□□ -1.2
TSG101-205ENST00000540555 SOGA1O94964 1423 aa7.57□□□□□ -1.2
TSG101-205ENST00000540555 MAPKBP1O60336 1514 aa7.57□□□□□ -1.2
TSG101-205ENST00000540555 MARVELD3Q96A59 401 aa7.56□□□□□ -1.2
TSG101-205ENST00000540555 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms