RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
UBC-207ENST00000540351 ATP10AO60312 1499 aa22.01■■□□□ 1.11
UBC-207ENST00000540351 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
UBC-207ENST00000540351 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
UBC-207ENST00000540351 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
UBC-207ENST00000540351 MLECQ14165 292 aa21.98■■□□□ 1.11
UBC-207ENST00000540351 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
UBC-207ENST00000540351 CEBPAP49715 358 aaPredicted RBP21.95■■□□□ 1.1
UBC-207ENST00000540351 KDM5CP41229 1560 aa21.93■■□□□ 1.1
UBC-207ENST00000540351 EEA1Q15075 1411 aa21.92■■□□□ 1.1
UBC-207ENST00000540351 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
UBC-207ENST00000540351 SETD1BQ9UPS6 1966 aaKnown RBP21.92■■□□□ 1.1
UBC-207ENST00000540351 SOCS7O14512 581 aa21.91■■□□□ 1.1
UBC-207ENST00000540351 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
UBC-207ENST00000540351 DISP3Q9P2K9 1392 aa21.87■■□□□ 1.09
UBC-207ENST00000540351 MYO5CQ9NQX4 1742 aa21.87■■□□□ 1.09
UBC-207ENST00000540351 LTBP4Q8N2S1 1624 aa21.87■■□□□ 1.09
UBC-207ENST00000540351 DIP2CQ9Y2E4 1556 aa21.87■■□□□ 1.09
UBC-207ENST00000540351 ZNF518AQ6AHZ1 1483 aa21.86■■□□□ 1.09
UBC-207ENST00000540351 KIF14Q15058 1648 aa21.86■■□□□ 1.09
UBC-207ENST00000540351 PTPRTO14522 1441 aa21.86■■□□□ 1.09
UBC-207ENST00000540351 EFCAB2Q5VUJ9 269 aa21.85■■□□□ 1.09
UBC-207ENST00000540351 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
UBC-207ENST00000540351 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
UBC-207ENST00000540351 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
UBC-207ENST00000540351 C3P01024 1663 aa21.82■■□□□ 1.08
UBC-207ENST00000540351 AGLP35573 1532 aa21.8■■□□□ 1.08
UBC-207ENST00000540351 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
UBC-207ENST00000540351 MLH3Q9UHC1 1453 aa21.8■■□□□ 1.08
UBC-207ENST00000540351 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
UBC-207ENST00000540351 TROQ12816 1431 aaPredicted RBP21.78■■□□□ 1.08
UBC-207ENST00000540351 SPATA31D1Q6ZQQ2 1576 aa21.78■■□□□ 1.08
UBC-207ENST00000540351 LRRIQ1Q96JM4 1722 aa21.76■■□□□ 1.07
UBC-207ENST00000540351 CDC42BPBQ9Y5S2 1711 aa21.76■■□□□ 1.07
UBC-207ENST00000540351 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
UBC-207ENST00000540351 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
UBC-207ENST00000540351 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
UBC-207ENST00000540351 TRAPPC8Q9Y2L5 1435 aa21.74■■□□□ 1.07
UBC-207ENST00000540351 ARHGAP5Q13017 1502 aa21.74■■□□□ 1.07
UBC-207ENST00000540351 ABCC1P33527 1531 aa21.71■■□□□ 1.07
UBC-207ENST00000540351 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
UBC-207ENST00000540351 PREX2Q70Z35 1606 aa21.67■■□□□ 1.06
UBC-207ENST00000540351 CDK11AQ9UQ88 783 aaPredicted RBP21.67■■□□□ 1.06
UBC-207ENST00000540351 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
UBC-207ENST00000540351 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.06
UBC-207ENST00000540351 NPATQ14207 1427 aa21.63■■□□□ 1.05
UBC-207ENST00000540351 CLIP1P30622 1438 aa21.63■■□□□ 1.05
UBC-207ENST00000540351 MROH2AA6NES4 1674 aa21.62■■□□□ 1.05
UBC-207ENST00000540351 CAMSAP1Q5T5Y3 1602 aa21.62■■□□□ 1.05
UBC-207ENST00000540351 ATP1B4Q9UN42 357 aaPredicted RBP21.6■■□□□ 1.05
UBC-207ENST00000540351 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.05
UBC-207ENST00000540351 SAMD9LQ8IVG5 1584 aa21.58■■□□□ 1.05
UBC-207ENST00000540351 ZMYM3Q14202 1370 aa21.57■■□□□ 1.04
UBC-207ENST00000540351 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
UBC-207ENST00000540351 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
UBC-207ENST00000540351 ZNF142P52746 1687 aaPredicted RBP21.55■■□□□ 1.04
UBC-207ENST00000540351 PLXNC1O60486 1568 aa21.54■■□□□ 1.04
UBC-207ENST00000540351 PLA2R1Q13018 1463 aa21.54■■□□□ 1.04
UBC-207ENST00000540351 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
UBC-207ENST00000540351 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
UBC-207ENST00000540351 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
UBC-207ENST00000540351 MYT1LQ9UL68 1186 aa21.52■■□□□ 1.04
UBC-207ENST00000540351 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
UBC-207ENST00000540351 MYO3AQ8NEV4 1616 aa21.5■■□□□ 1.03
UBC-207ENST00000540351 CCDC18Q5T9S5 1454 aa21.5■■□□□ 1.03
UBC-207ENST00000540351 ESF1Q9H501 851 aaKnown RBP21.49■■□□□ 1.03
UBC-207ENST00000540351 GPATCH8Q9UKJ3 1502 aaKnown RBP21.49■■□□□ 1.03
UBC-207ENST00000540351 SYCP2Q9BX26 1530 aa21.48■■□□□ 1.03
UBC-207ENST00000540351 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
UBC-207ENST00000540351 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
UBC-207ENST00000540351 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
UBC-207ENST00000540351 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
UBC-207ENST00000540351 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
UBC-207ENST00000540351 PKD2Q13563 968 aa21.45■■□□□ 1.02
UBC-207ENST00000540351 ATP7AQ04656 1500 aa21.45■■□□□ 1.02
UBC-207ENST00000540351 UBAP1LF5GYI3 381 aa21.44■■□□□ 1.02
UBC-207ENST00000540351 KIAA1107Q9UPP5 1409 aa21.44■■□□□ 1.02
UBC-207ENST00000540351 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
UBC-207ENST00000540351 A2MP01023 1474 aa21.42■■□□□ 1.02
UBC-207ENST00000540351 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.022e-19■■■□□ 16.8
UBC-207ENST00000540351 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.01
UBC-207ENST00000540351 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
UBC-207ENST00000540351 NEURL4Q96JN8 1562 aa21.38■■□□□ 1.01
UBC-207ENST00000540351 A2ML1A8K2U0 1454 aa21.37■■□□□ 1.01
UBC-207ENST00000540351 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
UBC-207ENST00000540351 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
UBC-207ENST00000540351 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
UBC-207ENST00000540351 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
UBC-207ENST00000540351 HSPA1LP34931 641 aa21.34■■□□□ 1.01
UBC-207ENST00000540351 PLEKHH2Q8IVE3 1493 aa21.33■■□□□ 1.01
UBC-207ENST00000540351 MBD5Q9P267 1494 aa21.32■■□□□ 1
UBC-207ENST00000540351 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
UBC-207ENST00000540351 GGT6Q6P531 493 aa21.3■■□□□ 1
UBC-207ENST00000540351 CPS1P31327 1500 aa21.29■■□□□ 1
UBC-207ENST00000540351 VWDEQ8N2E2 1590 aa21.28■■□□□ 1
UBC-207ENST00000540351 SHANK2Q9UPX8 1470 aa21.28■■□□□ 1
UBC-207ENST00000540351 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
UBC-207ENST00000540351 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
UBC-207ENST00000540351 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
UBC-207ENST00000540351 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms