RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
NECAP1-204ENST00000540083 NUP160Q12769 1436 aa11.79□□□□□ -0.52
NECAP1-204ENST00000540083 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
NECAP1-204ENST00000540083 FAM9AQ8IZU1 332 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-204ENST00000540083 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
NECAP1-204ENST00000540083 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
NECAP1-204ENST00000540083 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
NECAP1-204ENST00000540083 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
NECAP1-204ENST00000540083 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
NECAP1-204ENST00000540083 PYGBP11216 843 aa11.75□□□□□ -0.53
NECAP1-204ENST00000540083 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
NECAP1-204ENST00000540083 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
NECAP1-204ENST00000540083 KIF21BO75037 1637 aa11.73□□□□□ -0.53
NECAP1-204ENST00000540083 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
NECAP1-204ENST00000540083 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
NECAP1-204ENST00000540083 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-204ENST00000540083 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
NECAP1-204ENST00000540083 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
NECAP1-204ENST00000540083 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
NECAP1-204ENST00000540083 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
NECAP1-204ENST00000540083 IQGAP2Q13576 1575 aa11.68□□□□□ -0.54
NECAP1-204ENST00000540083 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
NECAP1-204ENST00000540083 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
NECAP1-204ENST00000540083 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
NECAP1-204ENST00000540083 SHROOM2Q13796 1616 aa11.65□□□□□ -0.54
NECAP1-204ENST00000540083 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
NECAP1-204ENST00000540083 ARHGEF11O15085 1522 aa11.65□□□□□ -0.55
NECAP1-204ENST00000540083 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-204ENST00000540083 TIE1P35590 1138 aa11.63□□□□□ -0.55
NECAP1-204ENST00000540083 PCDHB8Q9UN66 801 aa11.63□□□□□ -0.55
NECAP1-204ENST00000540083 UGGT2Q9NYU1 1516 aa11.63□□□□□ -0.55
NECAP1-204ENST00000540083 BMP2KQ9NSY1 1161 aaPredicted RBP11.62□□□□□ -0.55
NECAP1-204ENST00000540083 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
NECAP1-204ENST00000540083 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
NECAP1-204ENST00000540083 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
NECAP1-204ENST00000540083 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
NECAP1-204ENST00000540083 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
NECAP1-204ENST00000540083 ZEB1P37275 1124 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-204ENST00000540083 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-204ENST00000540083 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
NECAP1-204ENST00000540083 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
NECAP1-204ENST00000540083 EFCAB5A4FU69 1503 aa11.57□□□□□ -0.56
NECAP1-204ENST00000540083 PTPRGP23470 1445 aa11.57□□□□□ -0.56
NECAP1-204ENST00000540083 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
NECAP1-204ENST00000540083 ARAP1Q96P48 1450 aa11.54□□□□□ -0.56
NECAP1-204ENST00000540083 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
NECAP1-204ENST00000540083 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
NECAP1-204ENST00000540083 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
NECAP1-204ENST00000540083 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
NECAP1-204ENST00000540083 C7P10643 843 aa11.51□□□□□ -0.57
NECAP1-204ENST00000540083 PKD2Q13563 968 aa11.51□□□□□ -0.57
NECAP1-204ENST00000540083 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
NECAP1-204ENST00000540083 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
NECAP1-204ENST00000540083 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
NECAP1-204ENST00000540083 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
NECAP1-204ENST00000540083 PSEN1P49768 467 aa11.49□□□□□ -0.57
NECAP1-204ENST00000540083 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
NECAP1-204ENST00000540083 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
NECAP1-204ENST00000540083 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
NECAP1-204ENST00000540083 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
NECAP1-204ENST00000540083 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
NECAP1-204ENST00000540083 CLIP1P30622 1438 aa11.48□□□□□ -0.57
NECAP1-204ENST00000540083 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
NECAP1-204ENST00000540083 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-204ENST00000540083 LHX8Q68G74 356 aa11.47□□□□□ -0.57
NECAP1-204ENST00000540083 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-204ENST00000540083 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
NECAP1-204ENST00000540083 ARHGAP35Q9NRY4 1499 aa11.44□□□□□ -0.58
NECAP1-204ENST00000540083 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
NECAP1-204ENST00000540083 IER5LQ5T953 404 aa11.44□□□□□ -0.58
NECAP1-204ENST00000540083 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
NECAP1-204ENST00000540083 ABCC2Q92887 1545 aa11.43□□□□□ -0.58
NECAP1-204ENST00000540083 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-204ENST00000540083 ABCA8O94911 1581 aa11.41□□□□□ -0.58
NECAP1-204ENST00000540083 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
NECAP1-204ENST00000540083 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
NECAP1-204ENST00000540083 ATP1B4Q9UN42 357 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-204ENST00000540083 KDM5BQ9UGL1 1544 aa11.39□□□□□ -0.59
NECAP1-204ENST00000540083 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
NECAP1-204ENST00000540083 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
NECAP1-204ENST00000540083 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
NECAP1-204ENST00000540083 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-204ENST00000540083 SEC24BO95487 1268 aa11.38□□□□□ -0.59
NECAP1-204ENST00000540083 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
NECAP1-204ENST00000540083 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
NECAP1-204ENST00000540083 RGL2O15211 777 aa11.37□□□□□ -0.59
NECAP1-204ENST00000540083 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
NECAP1-204ENST00000540083 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
NECAP1-204ENST00000540083 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
NECAP1-204ENST00000540083 MAPKBP1O60336 1514 aa11.36□□□□□ -0.59
NECAP1-204ENST00000540083 HECW1Q76N89 1606 aa11.36□□□□□ -0.59
NECAP1-204ENST00000540083 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
NECAP1-204ENST00000540083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-204ENST00000540083 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
NECAP1-204ENST00000540083 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-204ENST00000540083 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
NECAP1-204ENST00000540083 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
NECAP1-204ENST00000540083 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
NECAP1-204ENST00000540083 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
NECAP1-204ENST00000540083 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms