RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-213ENST00000539357 EFCAB5A4FU69 1503 aa21.71■■□□□ 1.07
POLE-213ENST00000539357 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
POLE-213ENST00000539357 IQSEC2Q5JU85 1478 aa21.7■■□□□ 1.06
POLE-213ENST00000539357 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.06
POLE-213ENST00000539357 HSPA1LP34931 641 aa21.69■■□□□ 1.06
POLE-213ENST00000539357 ZNF335Q9H4Z2 1342 aaPredicted RBP21.69■■□□□ 1.06
POLE-213ENST00000539357 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
POLE-213ENST00000539357 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
POLE-213ENST00000539357 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
POLE-213ENST00000539357 C3P01024 1663 aa21.63■■□□□ 1.05
POLE-213ENST00000539357 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
POLE-213ENST00000539357 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
POLE-213ENST00000539357 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
POLE-213ENST00000539357 ATP10AO60312 1499 aa21.59■■□□□ 1.05
POLE-213ENST00000539357 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
POLE-213ENST00000539357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.59■■□□□ 1.051e-5■■■■□ 25.8
POLE-213ENST00000539357 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
POLE-213ENST00000539357 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
POLE-213ENST00000539357 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
POLE-213ENST00000539357 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
POLE-213ENST00000539357 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
POLE-213ENST00000539357 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
POLE-213ENST00000539357 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
POLE-213ENST00000539357 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
POLE-213ENST00000539357 PLEKHD1A6NEE1 506 aa21.52■■□□□ 1.04
POLE-213ENST00000539357 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
POLE-213ENST00000539357 TRAPPC8Q9Y2L5 1435 aa21.46■■□□□ 1.03
POLE-213ENST00000539357 AFAP1Q8N556 730 aa21.42■■□□□ 1.02
POLE-213ENST00000539357 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
POLE-213ENST00000539357 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
POLE-213ENST00000539357 SUPT6HQ7KZ85 1726 aaKnown RBP21.4■■□□□ 1.02
POLE-213ENST00000539357 RGS17Q9UGC6 210 aaPredicted RBP21.39■■□□□ 1.01
POLE-213ENST00000539357 DIP2CQ9Y2E4 1556 aa21.37■■□□□ 1.01
POLE-213ENST00000539357 TOM1O60784 492 aa21.35■■□□□ 1.01
POLE-213ENST00000539357 PLCH2O75038 1416 aa21.35■■□□□ 1.01
POLE-213ENST00000539357 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
POLE-213ENST00000539357 PRXQ9BXM0 1461 aa21.33■■□□□ 1.01
POLE-213ENST00000539357 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
POLE-213ENST00000539357 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
POLE-213ENST00000539357 MYO5CQ9NQX4 1742 aa21.29■■□□□ 1
POLE-213ENST00000539357 EFCAB2Q5VUJ9 269 aa21.29■■□□□ 1
POLE-213ENST00000539357 ALKQ9UM73 1620 aa21.27■■□□□ 1
POLE-213ENST00000539357 PKD2Q13563 968 aa21.26■□□□□ 0.99
POLE-213ENST00000539357 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
POLE-213ENST00000539357 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
POLE-213ENST00000539357 KDM5CP41229 1560 aa21.25■□□□□ 0.99
POLE-213ENST00000539357 MYO3AQ8NEV4 1616 aa21.25■□□□□ 0.99
POLE-213ENST00000539357 POTEAQ6S8J7 498 aa21.23■□□□□ 0.99
POLE-213ENST00000539357 TCOF1Q13428 1488 aaKnown RBP21.23■□□□□ 0.99
POLE-213ENST00000539357 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
POLE-213ENST00000539357 REREQ9P2R6 1566 aa21.21■□□□□ 0.99
POLE-213ENST00000539357 AGLP35573 1532 aa21.2■□□□□ 0.98
POLE-213ENST00000539357 KIF14Q15058 1648 aa21.2■□□□□ 0.98
POLE-213ENST00000539357 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
POLE-213ENST00000539357 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
POLE-213ENST00000539357 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
POLE-213ENST00000539357 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
POLE-213ENST00000539357 PLA2R1Q13018 1463 aa21.19■□□□□ 0.98
POLE-213ENST00000539357 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
POLE-213ENST00000539357 NPATQ14207 1427 aa21.18■□□□□ 0.98
POLE-213ENST00000539357 CNTLNQ9NXG0 1405 aa21.17■□□□□ 0.98
POLE-213ENST00000539357 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
POLE-213ENST00000539357 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
POLE-213ENST00000539357 CPS1P31327 1500 aa21.14■□□□□ 0.97
POLE-213ENST00000539357 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
POLE-213ENST00000539357 MLH3Q9UHC1 1453 aa21.12■□□□□ 0.97
POLE-213ENST00000539357 POLR1AO95602 1720 aaPredicted RBP21.11■□□□□ 0.97
POLE-213ENST00000539357 PTPRKQ15262 1439 aa21.11■□□□□ 0.97
POLE-213ENST00000539357 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
POLE-213ENST00000539357 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
POLE-213ENST00000539357 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
POLE-213ENST00000539357 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
POLE-213ENST00000539357 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
POLE-213ENST00000539357 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
POLE-213ENST00000539357 GGT6Q6P531 493 aa21.03■□□□□ 0.96
POLE-213ENST00000539357 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
POLE-213ENST00000539357 ABCC1P33527 1531 aa20.99■□□□□ 0.95
POLE-213ENST00000539357 LRRC7Q96NW7 1537 aa20.96■□□□□ 0.95
POLE-213ENST00000539357 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
POLE-213ENST00000539357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■□□□□ 11
POLE-213ENST00000539357 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
POLE-213ENST00000539357 UPF1Q92900 1129 aaKnown RBP eCLIP20.95■□□□□ 0.94
POLE-213ENST00000539357 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
POLE-213ENST00000539357 SAMD9LQ8IVG5 1584 aa20.93■□□□□ 0.94
POLE-213ENST00000539357 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
POLE-213ENST00000539357 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
POLE-213ENST00000539357 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
POLE-213ENST00000539357 PREX2Q70Z35 1606 aa20.91■□□□□ 0.94
POLE-213ENST00000539357 ANKLE2Q86XL3 938 aa20.91■□□□□ 0.94
POLE-213ENST00000539357 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
POLE-213ENST00000539357 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.94
POLE-213ENST00000539357 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
POLE-213ENST00000539357 HNRNPMP52272 730 aaKnown RBP eCLIP20.88■□□□□ 0.93
POLE-213ENST00000539357 SPAG9O60271 1321 aaKnown RBP20.87■□□□□ 0.93
POLE-213ENST00000539357 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
POLE-213ENST00000539357 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
POLE-213ENST00000539357 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
POLE-213ENST00000539357 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
POLE-213ENST00000539357 TNRQ92752 1358 aa20.85■□□□□ 0.93
POLE-213ENST00000539357 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms