RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ABCA8O94911 1581 aa25.63■■□□□ 1.69
GNE-204ENST00000539208 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
GNE-204ENST00000539208 GPATCH8Q9UKJ3 1502 aaKnown RBP25.59■■□□□ 1.69
GNE-204ENST00000539208 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.69
GNE-204ENST00000539208 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
GNE-204ENST00000539208 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
GNE-204ENST00000539208 KIF14Q15058 1648 aa25.56■■□□□ 1.68
GNE-204ENST00000539208 CAMSAP2Q08AD1 1489 aa25.56■■□□□ 1.68
GNE-204ENST00000539208 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
GNE-204ENST00000539208 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
GNE-204ENST00000539208 ATP10BO94823 1461 aa25.51■■□□□ 1.67
GNE-204ENST00000539208 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
GNE-204ENST00000539208 PLEKHD1A6NEE1 506 aa25.49■■□□□ 1.67
GNE-204ENST00000539208 ADGRL2O95490 1459 aa25.48■■□□□ 1.67
GNE-204ENST00000539208 CROCC2H7BZ55 1655 aa25.47■■□□□ 1.67
GNE-204ENST00000539208 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
GNE-204ENST00000539208 DDX10Q13206 875 aaKnown RBP25.46■■□□□ 1.67
GNE-204ENST00000539208 NCOA1Q15788 1441 aa25.45■■□□□ 1.67
GNE-204ENST00000539208 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
GNE-204ENST00000539208 PTPRGP23470 1445 aa25.43■■□□□ 1.66
GNE-204ENST00000539208 CHD1O14646 1710 aa25.43■■□□□ 1.66
GNE-204ENST00000539208 ANKRD30BQ9BXX2 1392 aa25.42■■□□□ 1.66
GNE-204ENST00000539208 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
GNE-204ENST00000539208 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
GNE-204ENST00000539208 SHANK2Q9UPX8 1470 aa25.37■■□□□ 1.65
GNE-204ENST00000539208 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
GNE-204ENST00000539208 ANKRD30AQ9BXX3 1397 aa25.37■■□□□ 1.65
GNE-204ENST00000539208 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
GNE-204ENST00000539208 PZPP20742 1482 aa25.35■■□□□ 1.65
GNE-204ENST00000539208 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
GNE-204ENST00000539208 FOXD1Q16676 465 aa25.31■■□□□ 1.64
GNE-204ENST00000539208 L3MBTL2Q969R5 705 aa25.31■■□□□ 1.64
GNE-204ENST00000539208 ARHGEF5Q12774 1597 aa25.29■■□□□ 1.64
GNE-204ENST00000539208 TEX14Q8IWB6 1497 aa25.29■■□□□ 1.64
GNE-204ENST00000539208 CCER2I3L3R5 266 aa25.28■■□□□ 1.64
GNE-204ENST00000539208 C9orf84Q5VXU9 1444 aa25.27■■□□□ 1.64
GNE-204ENST00000539208 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
GNE-204ENST00000539208 ANP32CO43423 234 aa25.25■■□□□ 1.63
GNE-204ENST00000539208 KCNH8Q96L42 1107 aa25.24■■□□□ 1.63
GNE-204ENST00000539208 KIAA1107Q9UPP5 1409 aa25.24■■□□□ 1.63
GNE-204ENST00000539208 PREX2Q70Z35 1606 aa25.23■■□□□ 1.63
GNE-204ENST00000539208 HSPA5P11021 654 aaKnown RBP25.23■■□□□ 1.63
GNE-204ENST00000539208 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
GNE-204ENST00000539208 MBD5Q9P267 1494 aa25.22■■□□□ 1.63
GNE-204ENST00000539208 TSPY4P0CV99 314 aa25.21■■□□□ 1.63
GNE-204ENST00000539208 TSPY10P0CW01 314 aa25.21■■□□□ 1.63
GNE-204ENST00000539208 CDC42BPBQ9Y5S2 1711 aa25.2■■□□□ 1.63
GNE-204ENST00000539208 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.62
GNE-204ENST00000539208 ABCC2Q92887 1545 aa25.2■■□□□ 1.62
GNE-204ENST00000539208 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
GNE-204ENST00000539208 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
GNE-204ENST00000539208 SAMD9LQ8IVG5 1584 aa25.17■■□□□ 1.62
GNE-204ENST00000539208 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
GNE-204ENST00000539208 WASHC2AQ641Q2 1341 aa25.15■■□□□ 1.62
GNE-204ENST00000539208 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
GNE-204ENST00000539208 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
GNE-204ENST00000539208 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.62
GNE-204ENST00000539208 PKD2Q13563 968 aa25.14■■□□□ 1.61
GNE-204ENST00000539208 HNRNPMP52272 730 aaKnown RBP eCLIP25.13■■□□□ 1.61
GNE-204ENST00000539208 KIF15Q9NS87 1388 aa25.12■■□□□ 1.61
GNE-204ENST00000539208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.11■■□□□ 1.61
GNE-204ENST00000539208 NUP155O75694 1391 aa25.1■■□□□ 1.61
GNE-204ENST00000539208 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
GNE-204ENST00000539208 SPATA31E1Q6ZUB1 1445 aa25.09■■□□□ 1.61
GNE-204ENST00000539208 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
GNE-204ENST00000539208 UHRF1BP1LA0JNW5 1464 aa25.08■■□□□ 1.61
GNE-204ENST00000539208 PLEKHH2Q8IVE3 1493 aa25.05■■□□□ 1.6
GNE-204ENST00000539208 ARHGAP5Q13017 1502 aa25.05■■□□□ 1.6
GNE-204ENST00000539208 MYO5CQ9NQX4 1742 aa25.05■■□□□ 1.6
GNE-204ENST00000539208 CCDC7Q96M83 1385 aa25.03■■□□□ 1.6
GNE-204ENST00000539208 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
GNE-204ENST00000539208 POLR1AO95602 1720 aaPredicted RBP25.03■■□□□ 1.6
GNE-204ENST00000539208 SYCP2Q9BX26 1530 aa25.02■■□□□ 1.6
GNE-204ENST00000539208 ARHGEF12Q9NZN5 1544 aa25■■□□□ 1.59
GNE-204ENST00000539208 ZCCHC11Q5TAX3 1644 aaKnown RBP25■■□□□ 1.59
GNE-204ENST00000539208 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
GNE-204ENST00000539208 C11orf95C9JLR9 678 aaPredicted RBP24.98■■□□□ 1.59
GNE-204ENST00000539208 PLXNC1O60486 1568 aa24.98■■□□□ 1.59
GNE-204ENST00000539208 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
GNE-204ENST00000539208 PLCH2O75038 1416 aa24.96■■□□□ 1.59
GNE-204ENST00000539208 SUPT16HQ9Y5B9 1047 aaKnown RBP24.95■■□□□ 1.59
GNE-204ENST00000539208 UNC13BO14795 1591 aa24.95■■□□□ 1.58
GNE-204ENST00000539208 RALGAPBQ86X10 1494 aa24.91■■□□□ 1.58
GNE-204ENST00000539208 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
GNE-204ENST00000539208 KDM5CP41229 1560 aa24.88■■□□□ 1.57
GNE-204ENST00000539208 DUOX2Q9NRD8 1548 aa24.88■■□□□ 1.57
GNE-204ENST00000539208 USP47Q96K76 1375 aa24.87■■□□□ 1.57
GNE-204ENST00000539208 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
GNE-204ENST00000539208 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
GNE-204ENST00000539208 ARAP3Q8WWN8 1544 aa24.86■■□□□ 1.57
GNE-204ENST00000539208 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
GNE-204ENST00000539208 ABCC1P33527 1531 aa24.84■■□□□ 1.57
GNE-204ENST00000539208 ERBINQ96RT1 1412 aa24.84■■□□□ 1.57
GNE-204ENST00000539208 PRKRIP1Q9H875 184 aaPredicted RBP24.83■■□□□ 1.57
GNE-204ENST00000539208 MAGI2Q86UL8 1455 aa24.83■■□□□ 1.57
GNE-204ENST00000539208 BCORL1Q5H9F3 1711 aa24.81■■□□□ 1.56
GNE-204ENST00000539208 ZNF326Q5BKZ1 582 aaKnown RBP24.81■■□□□ 1.56
GNE-204ENST00000539208 CCDC144AA2RUR9 1427 aa24.79■■□□□ 1.56
GNE-204ENST00000539208 PLA2R1Q13018 1463 aa24.77■■□□□ 1.56
GNE-204ENST00000539208 ATP10AO60312 1499 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms