RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.81
PROM1-219ENST00000539194 ABCA8O94911 1581 aa9.96□□□□□ -0.82
PROM1-219ENST00000539194 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
PROM1-219ENST00000539194 NUP160Q12769 1436 aa9.95□□□□□ -0.82
PROM1-219ENST00000539194 KDM5DQ9BY66 1539 aa9.94□□□□□ -0.82
PROM1-219ENST00000539194 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
PROM1-219ENST00000539194 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
PROM1-219ENST00000539194 BCORL1Q5H9F3 1711 aa9.92□□□□□ -0.82
PROM1-219ENST00000539194 GPATCH8Q9UKJ3 1502 aaKnown RBP9.92□□□□□ -0.82
PROM1-219ENST00000539194 DDX10Q13206 875 aaKnown RBP9.92□□□□□ -0.82
PROM1-219ENST00000539194 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
PROM1-219ENST00000539194 CAMSAP2Q08AD1 1489 aa9.91□□□□□ -0.82
PROM1-219ENST00000539194 E9PCH4 1651 aa9.91□□□□□ -0.82
PROM1-219ENST00000539194 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
PROM1-219ENST00000539194 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
PROM1-219ENST00000539194 KDM5CP41229 1560 aa9.9□□□□□ -0.82
PROM1-219ENST00000539194 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.82
PROM1-219ENST00000539194 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.82
PROM1-219ENST00000539194 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
PROM1-219ENST00000539194 ARHGEF5Q12774 1597 aa9.88□□□□□ -0.83
PROM1-219ENST00000539194 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
PROM1-219ENST00000539194 SHROOM2Q13796 1616 aa9.88□□□□□ -0.83
PROM1-219ENST00000539194 PLB1Q6P1J6 1458 aa9.87□□□□□ -0.83
PROM1-219ENST00000539194 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
PROM1-219ENST00000539194 CNTLNQ9NXG0 1405 aa9.87□□□□□ -0.83
PROM1-219ENST00000539194 PTPRGP23470 1445 aa9.87□□□□□ -0.83
PROM1-219ENST00000539194 MPHOSPH9Q99550 1183 aa9.86□□□□□ -0.83
PROM1-219ENST00000539194 PRG4Q92954 1404 aaPredicted RBP9.86□□□□□ -0.83
PROM1-219ENST00000539194 UHRF1BP1Q6BDS2 1440 aa9.86□□□□□ -0.83
PROM1-219ENST00000539194 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
PROM1-219ENST00000539194 ATP1B4Q9UN42 357 aaPredicted RBP9.85□□□□□ -0.83
PROM1-219ENST00000539194 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
PROM1-219ENST00000539194 HIRIP3Q9BW71 556 aaPredicted RBP9.85□□□□□ -0.83
PROM1-219ENST00000539194 MAST1Q9Y2H9 1570 aa9.84□□□□□ -0.83
PROM1-219ENST00000539194 ARHGEF12Q9NZN5 1544 aa9.83□□□□□ -0.84
PROM1-219ENST00000539194 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
PROM1-219ENST00000539194 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
PROM1-219ENST00000539194 ZNF644Q9H582 1327 aaPredicted RBP9.83□□□□□ -0.84
PROM1-219ENST00000539194 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
PROM1-219ENST00000539194 UNC13BO14795 1591 aa9.82□□□□□ -0.84
PROM1-219ENST00000539194 SAMD9LQ8IVG5 1584 aa9.82□□□□□ -0.84
PROM1-219ENST00000539194 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
PROM1-219ENST00000539194 ATP10BO94823 1461 aa9.82□□□□□ -0.84
PROM1-219ENST00000539194 DHX29Q7Z478 1369 aaKnown RBP9.82□□□□□ -0.84
PROM1-219ENST00000539194 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
PROM1-219ENST00000539194 LAMC1P11047 1609 aa9.81□□□□□ -0.84
PROM1-219ENST00000539194 KIAA1107Q9UPP5 1409 aa9.81□□□□□ -0.84
PROM1-219ENST00000539194 TRPM1Q7Z4N2 1603 aa9.8□□□□□ -0.84
PROM1-219ENST00000539194 RALGAPBQ86X10 1494 aa9.79□□□□□ -0.84
PROM1-219ENST00000539194 ANP32CO43423 234 aa9.79□□□□□ -0.84
PROM1-219ENST00000539194 CHD1O14646 1710 aa9.78□□□□□ -0.84
PROM1-219ENST00000539194 PLXNC1O60486 1568 aa9.78□□□□□ -0.84
PROM1-219ENST00000539194 MYO5CQ9NQX4 1742 aa9.78□□□□□ -0.84
PROM1-219ENST00000539194 CHIC2Q9UKJ5 165 aa9.78□□□□□ -0.84
PROM1-219ENST00000539194 MAGI2Q86UL8 1455 aa9.78□□□□□ -0.84
PROM1-219ENST00000539194 IQGAP3Q86VI3 1631 aa9.77□□□□□ -0.85
PROM1-219ENST00000539194 CCDC184Q52MB2 194 aa9.77□□□□□ -0.85
PROM1-219ENST00000539194 MYT1Q01538 1121 aa9.76□□□□□ -0.85
PROM1-219ENST00000539194 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
PROM1-219ENST00000539194 FOXD1Q16676 465 aa9.75□□□□□ -0.85
PROM1-219ENST00000539194 RNF17Q9BXT8 1623 aaKnown RBP9.75□□□□□ -0.85
PROM1-219ENST00000539194 KIF7Q2M1P5 1343 aa9.75□□□□□ -0.85
PROM1-219ENST00000539194 EIF4G2P78344 907 aaKnown RBP eCLIP9.74□□□□□ -0.85
PROM1-219ENST00000539194 PRKRIP1Q9H875 184 aaPredicted RBP9.74□□□□□ -0.85
PROM1-219ENST00000539194 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
PROM1-219ENST00000539194 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
PROM1-219ENST00000539194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.73□□□□□ -0.85
PROM1-219ENST00000539194 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
PROM1-219ENST00000539194 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
PROM1-219ENST00000539194 ATP10AO60312 1499 aa9.72□□□□□ -0.85
PROM1-219ENST00000539194 FKBP8Q14318 412 aa9.72□□□□□ -0.85
PROM1-219ENST00000539194 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
PROM1-219ENST00000539194 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
PROM1-219ENST00000539194 ARID4BQ4LE39 1312 aaPredicted RBP9.72□□□□□ -0.85
PROM1-219ENST00000539194 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
PROM1-219ENST00000539194 PRDM15P57071 1507 aaPredicted RBP9.71□□□□□ -0.86
PROM1-219ENST00000539194 ANKRD30AQ9BXX3 1397 aa9.7□□□□□ -0.86
PROM1-219ENST00000539194 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
PROM1-219ENST00000539194 JPH4Q96JJ6 628 aa9.7□□□□□ -0.86
PROM1-219ENST00000539194 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
PROM1-219ENST00000539194 CCDC141Q6ZP82 1450 aa9.69□□□□□ -0.86
PROM1-219ENST00000539194 CLASP1Q7Z460 1538 aa9.68□□□□□ -0.86
PROM1-219ENST00000539194 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
PROM1-219ENST00000539194 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
PROM1-219ENST00000539194 CDK11AQ9UQ88 783 aaPredicted RBP9.68□□□□□ -0.86
PROM1-219ENST00000539194 ERCC6Q03468 1493 aa9.68□□□□□ -0.86
PROM1-219ENST00000539194 LRPPRCP42704 1394 aaKnown RBP9.68□□□□□ -0.86
PROM1-219ENST00000539194 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
PROM1-219ENST00000539194 USP47Q96K76 1375 aa9.67□□□□□ -0.86
PROM1-219ENST00000539194 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
PROM1-219ENST00000539194 ABCC2Q92887 1545 aa9.67□□□□□ -0.86
PROM1-219ENST00000539194 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
PROM1-219ENST00000539194 CFDP1Q9UEE9 299 aaPredicted RBP9.67□□□□□ -0.86
PROM1-219ENST00000539194 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
PROM1-219ENST00000539194 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
PROM1-219ENST00000539194 ZCCHC11Q5TAX3 1644 aaKnown RBP9.66□□□□□ -0.86
PROM1-219ENST00000539194 CEP152O94986 1710 aa9.66□□□□□ -0.86
PROM1-219ENST00000539194 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
PROM1-219ENST00000539194 NEURL4Q96JN8 1562 aa9.66□□□□□ -0.86
PROM1-219ENST00000539194 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms