RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CLPB-208ENST00000538021 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
CLPB-208ENST00000538021 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
CLPB-208ENST00000538021 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
CLPB-208ENST00000538021 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
CLPB-208ENST00000538021 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
CLPB-208ENST00000538021 ARHGEF12Q9NZN5 1544 aa18.86■□□□□ 0.61
CLPB-208ENST00000538021 ATP10AO60312 1499 aa18.86■□□□□ 0.61
CLPB-208ENST00000538021 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
CLPB-208ENST00000538021 STRCQ7RTU9 1775 aa18.83■□□□□ 0.6
CLPB-208ENST00000538021 PLCH2O75038 1416 aa18.83■□□□□ 0.6
CLPB-208ENST00000538021 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
CLPB-208ENST00000538021 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
CLPB-208ENST00000538021 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
CLPB-208ENST00000538021 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
CLPB-208ENST00000538021 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
CLPB-208ENST00000538021 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
CLPB-208ENST00000538021 SETD1BQ9UPS6 1966 aaKnown RBP18.74■□□□□ 0.59
CLPB-208ENST00000538021 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
CLPB-208ENST00000538021 PTPRTO14522 1441 aa18.74■□□□□ 0.59
CLPB-208ENST00000538021 ZNF518AQ6AHZ1 1483 aa18.72■□□□□ 0.59
CLPB-208ENST00000538021 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
CLPB-208ENST00000538021 ESF1Q9H501 851 aaKnown RBP18.72■□□□□ 0.59
CLPB-208ENST00000538021 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
CLPB-208ENST00000538021 EEA1Q15075 1411 aa18.68■□□□□ 0.58
CLPB-208ENST00000538021 ARHGAP5Q13017 1502 aa18.68■□□□□ 0.58
CLPB-208ENST00000538021 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
CLPB-208ENST00000538021 C3P01024 1663 aa18.67■□□□□ 0.58
CLPB-208ENST00000538021 KDM5CP41229 1560 aa18.66■□□□□ 0.58
CLPB-208ENST00000538021 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
CLPB-208ENST00000538021 KIF14Q15058 1648 aa18.66■□□□□ 0.58
CLPB-208ENST00000538021 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
CLPB-208ENST00000538021 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
CLPB-208ENST00000538021 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
CLPB-208ENST00000538021 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
CLPB-208ENST00000538021 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
CLPB-208ENST00000538021 ABCA6Q8N139 1617 aa18.62■□□□□ 0.57
CLPB-208ENST00000538021 FMN1Q68DA7 1419 aa18.61■□□□□ 0.57
CLPB-208ENST00000538021 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
CLPB-208ENST00000538021 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
CLPB-208ENST00000538021 CLIP1P30622 1438 aa18.59■□□□□ 0.57
CLPB-208ENST00000538021 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
CLPB-208ENST00000538021 AGLP35573 1532 aa18.58■□□□□ 0.56
CLPB-208ENST00000538021 CAMSAP1Q5T5Y3 1602 aa18.57■□□□□ 0.56
CLPB-208ENST00000538021 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
CLPB-208ENST00000538021 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
CLPB-208ENST00000538021 NCKAP5LQ9HCH0 1330 aa18.56■□□□□ 0.56
CLPB-208ENST00000538021 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
CLPB-208ENST00000538021 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
CLPB-208ENST00000538021 ABCC1P33527 1531 aa18.52■□□□□ 0.56
CLPB-208ENST00000538021 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.55
CLPB-208ENST00000538021 NPATQ14207 1427 aa18.5■□□□□ 0.55
CLPB-208ENST00000538021 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
CLPB-208ENST00000538021 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
CLPB-208ENST00000538021 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
CLPB-208ENST00000538021 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
CLPB-208ENST00000538021 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
CLPB-208ENST00000538021 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
CLPB-208ENST00000538021 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
CLPB-208ENST00000538021 PKD2Q13563 968 aa18.46■□□□□ 0.55
CLPB-208ENST00000538021 MROH2AA6NES4 1674 aa18.46■□□□□ 0.55
CLPB-208ENST00000538021 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
CLPB-208ENST00000538021 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
CLPB-208ENST00000538021 PLA2R1Q13018 1463 aa18.42■□□□□ 0.54
CLPB-208ENST00000538021 PIP4K2BP78356 416 aa18.42■□□□□ 0.54
CLPB-208ENST00000538021 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
CLPB-208ENST00000538021 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
CLPB-208ENST00000538021 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
CLPB-208ENST00000538021 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
CLPB-208ENST00000538021 HSPA1LP34931 641 aa18.41■□□□□ 0.54
CLPB-208ENST00000538021 CEP170BQ9Y4F5 1589 aaPredicted RBP18.4■□□□□ 0.54
CLPB-208ENST00000538021 GGT6Q6P531 493 aa18.4■□□□□ 0.54
CLPB-208ENST00000538021 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
CLPB-208ENST00000538021 TCOF1Q13428 1488 aaKnown RBP18.39■□□□□ 0.54
CLPB-208ENST00000538021 ZNF142P52746 1687 aaPredicted RBP18.39■□□□□ 0.53
CLPB-208ENST00000538021 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
CLPB-208ENST00000538021 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
CLPB-208ENST00000538021 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
CLPB-208ENST00000538021 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
CLPB-208ENST00000538021 SYCP2Q9BX26 1530 aa18.38■□□□□ 0.53
CLPB-208ENST00000538021 TOM1O60784 492 aa18.36■□□□□ 0.53
CLPB-208ENST00000538021 A2MP01023 1474 aa18.34■□□□□ 0.53
CLPB-208ENST00000538021 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
CLPB-208ENST00000538021 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
CLPB-208ENST00000538021 ATP7AQ04656 1500 aa18.33■□□□□ 0.53
CLPB-208ENST00000538021 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
CLPB-208ENST00000538021 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
CLPB-208ENST00000538021 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
CLPB-208ENST00000538021 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
CLPB-208ENST00000538021 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
CLPB-208ENST00000538021 CPS1P31327 1500 aa18.28■□□□□ 0.52
CLPB-208ENST00000538021 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
CLPB-208ENST00000538021 SHANK2Q9UPX8 1470 aa18.27■□□□□ 0.52
CLPB-208ENST00000538021 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
CLPB-208ENST00000538021 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
CLPB-208ENST00000538021 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
CLPB-208ENST00000538021 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
CLPB-208ENST00000538021 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
CLPB-208ENST00000538021 NEURL4Q96JN8 1562 aa18.23■□□□□ 0.51
CLPB-208ENST00000538021 TNRQ92752 1358 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms