RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.25
PTPRR-205ENST00000537619 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
PTPRR-205ENST00000537619 CDK11AQ9UQ88 783 aaPredicted RBP13.43□□□□□ -0.26
PTPRR-205ENST00000537619 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
PTPRR-205ENST00000537619 ATP10BO94823 1461 aa13.43□□□□□ -0.26
PTPRR-205ENST00000537619 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
PTPRR-205ENST00000537619 CHD1O14646 1710 aa13.42□□□□□ -0.26
PTPRR-205ENST00000537619 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
PTPRR-205ENST00000537619 ITSN2Q9NZM3 1697 aa13.41□□□□□ -0.26
PTPRR-205ENST00000537619 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
PTPRR-205ENST00000537619 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
PTPRR-205ENST00000537619 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
PTPRR-205ENST00000537619 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
PTPRR-205ENST00000537619 MPHOSPH9Q99550 1183 aa13.37□□□□□ -0.27
PTPRR-205ENST00000537619 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
PTPRR-205ENST00000537619 CFDP1Q9UEE9 299 aaPredicted RBP13.37□□□□□ -0.27
PTPRR-205ENST00000537619 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
PTPRR-205ENST00000537619 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
PTPRR-205ENST00000537619 FOXD1Q16676 465 aa13.35□□□□□ -0.27
PTPRR-205ENST00000537619 PTPRGP23470 1445 aa13.35□□□□□ -0.27
PTPRR-205ENST00000537619 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
PTPRR-205ENST00000537619 ERCC6L2Q5T890 1561 aa13.35□□□□□ -0.27
PTPRR-205ENST00000537619 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
PTPRR-205ENST00000537619 NCOA1Q15788 1441 aa13.34□□□□□ -0.27
PTPRR-205ENST00000537619 PZPP20742 1482 aa13.33□□□□□ -0.28
PTPRR-205ENST00000537619 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
PTPRR-205ENST00000537619 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
PTPRR-205ENST00000537619 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
PTPRR-205ENST00000537619 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
PTPRR-205ENST00000537619 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
PTPRR-205ENST00000537619 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
PTPRR-205ENST00000537619 RPRD2Q5VT52 1461 aaKnown RBP13.28□□□□□ -0.28
PTPRR-205ENST00000537619 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
PTPRR-205ENST00000537619 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
PTPRR-205ENST00000537619 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
PTPRR-205ENST00000537619 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
PTPRR-205ENST00000537619 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 MBD5Q9P267 1494 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
PTPRR-205ENST00000537619 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 ABCC2Q92887 1545 aa13.25□□□□□ -0.29
PTPRR-205ENST00000537619 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
PTPRR-205ENST00000537619 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
PTPRR-205ENST00000537619 ANKRD50Q9ULJ7 1429 aa13.23□□□□□ -0.29
PTPRR-205ENST00000537619 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
PTPRR-205ENST00000537619 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRR-205ENST00000537619 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
PTPRR-205ENST00000537619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRR-205ENST00000537619 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.29
PTPRR-205ENST00000537619 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
PTPRR-205ENST00000537619 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
PTPRR-205ENST00000537619 KIF15Q9NS87 1388 aa13.19□□□□□ -0.3
PTPRR-205ENST00000537619 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
PTPRR-205ENST00000537619 PKD2Q13563 968 aa13.17□□□□□ -0.3
PTPRR-205ENST00000537619 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
PTPRR-205ENST00000537619 ZCCHC11Q5TAX3 1644 aaKnown RBP13.16□□□□□ -0.3
PTPRR-205ENST00000537619 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
PTPRR-205ENST00000537619 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
PTPRR-205ENST00000537619 NUP155O75694 1391 aa13.15□□□□□ -0.3
PTPRR-205ENST00000537619 TSPY4P0CV99 314 aa13.15□□□□□ -0.3
PTPRR-205ENST00000537619 TSPY10P0CW01 314 aa13.15□□□□□ -0.3
PTPRR-205ENST00000537619 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
PTPRR-205ENST00000537619 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
PTPRR-205ENST00000537619 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPRR-205ENST00000537619 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
PTPRR-205ENST00000537619 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
PTPRR-205ENST00000537619 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
PTPRR-205ENST00000537619 ANP32CO43423 234 aa13.13□□□□□ -0.31
PTPRR-205ENST00000537619 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
PTPRR-205ENST00000537619 FAM135AQ9P2D6 1515 aa13.1□□□□□ -0.31
PTPRR-205ENST00000537619 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
PTPRR-205ENST00000537619 UNC13BO14795 1591 aa13.09□□□□□ -0.31
PTPRR-205ENST00000537619 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
PTPRR-205ENST00000537619 PLCH2O75038 1416 aa13.09□□□□□ -0.31
PTPRR-205ENST00000537619 CNTLNQ9NXG0 1405 aa13.09□□□□□ -0.31
PTPRR-205ENST00000537619 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.32
PTPRR-205ENST00000537619 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
PTPRR-205ENST00000537619 ABCC1P33527 1531 aa13.07□□□□□ -0.32
PTPRR-205ENST00000537619 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
PTPRR-205ENST00000537619 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
PTPRR-205ENST00000537619 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
PTPRR-205ENST00000537619 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
PTPRR-205ENST00000537619 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
PTPRR-205ENST00000537619 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
PTPRR-205ENST00000537619 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
PTPRR-205ENST00000537619 KDM5CP41229 1560 aa13.04□□□□□ -0.32
PTPRR-205ENST00000537619 USP47Q96K76 1375 aa13.03□□□□□ -0.32
PTPRR-205ENST00000537619 MAGI2Q86UL8 1455 aa13.03□□□□□ -0.32
PTPRR-205ENST00000537619 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.32
PTPRR-205ENST00000537619 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
PTPRR-205ENST00000537619 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.32
PTPRR-205ENST00000537619 EFCAB2Q5VUJ9 269 aa13.01□□□□□ -0.33
PTPRR-205ENST00000537619 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
PTPRR-205ENST00000537619 ARAP3Q8WWN8 1544 aa13□□□□□ -0.33
PTPRR-205ENST00000537619 WDR7Q9Y4E6 1490 aa13□□□□□ -0.33
PTPRR-205ENST00000537619 ERBINQ96RT1 1412 aa13□□□□□ -0.33
PTPRR-205ENST00000537619 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
PTPRR-205ENST00000537619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms