RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
SRGAP1-202ENST00000537556 ESPNB1AK53 854 aa11.07□□□□□ -0.64
SRGAP1-202ENST00000537556 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
SRGAP1-202ENST00000537556 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
SRGAP1-202ENST00000537556 RRP1P56182 461 aaKnown RBP11.06□□□□□ -0.64
SRGAP1-202ENST00000537556 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
SRGAP1-202ENST00000537556 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
SRGAP1-202ENST00000537556 FSD2A1L4K1 749 aa11.04□□□□□ -0.64
SRGAP1-202ENST00000537556 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
SRGAP1-202ENST00000537556 MTERF4Q7Z6M4 381 aaKnown RBP11.04□□□□□ -0.64
SRGAP1-202ENST00000537556 MYH16Q9H6N6 1097 aa11.04□□□□□ -0.64
SRGAP1-202ENST00000537556 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
SRGAP1-202ENST00000537556 MRE11P49959 708 aa11.03□□□□□ -0.64
SRGAP1-202ENST00000537556 TERF1P54274 439 aa11.03□□□□□ -0.64
SRGAP1-202ENST00000537556 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
SRGAP1-202ENST00000537556 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
SRGAP1-202ENST00000537556 ARAP1Q96P48 1450 aa11.02□□□□□ -0.64
SRGAP1-202ENST00000537556 EIF4G2P78344 907 aaKnown RBP eCLIP11.02□□□□□ -0.64
SRGAP1-202ENST00000537556 FAM161AQ3B820 660 aa11.02□□□□□ -0.64
SRGAP1-202ENST00000537556 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
SRGAP1-202ENST00000537556 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
SRGAP1-202ENST00000537556 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.65
SRGAP1-202ENST00000537556 TNNT2P45379 298 aaPredicted RBP11.01□□□□□ -0.65
SRGAP1-202ENST00000537556 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
SRGAP1-202ENST00000537556 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
SRGAP1-202ENST00000537556 ISY1Q9ULR0 285 aaKnown RBP11.01□□□□□ -0.65
SRGAP1-202ENST00000537556 BECN1Q14457 450 aa11□□□□□ -0.65
SRGAP1-202ENST00000537556 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
SRGAP1-202ENST00000537556 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
SRGAP1-202ENST00000537556 PANK2Q9BZ23 570 aa10.99□□□□□ -0.65
SRGAP1-202ENST00000537556 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
SRGAP1-202ENST00000537556 ARXQ96QS3 562 aa10.98□□□□□ -0.65
SRGAP1-202ENST00000537556 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
SRGAP1-202ENST00000537556 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
SRGAP1-202ENST00000537556 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
SRGAP1-202ENST00000537556 ZHX1Q9UKY1 873 aaPredicted RBP10.97□□□□□ -0.65
SRGAP1-202ENST00000537556 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.66
SRGAP1-202ENST00000537556 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.66
SRGAP1-202ENST00000537556 DMTNQ08495 405 aa10.95□□□□□ -0.66
SRGAP1-202ENST00000537556 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
SRGAP1-202ENST00000537556 FAM13BQ9NYF5 915 aa10.95□□□□□ -0.66
SRGAP1-202ENST00000537556 C8orf34Q49A92 452 aa10.94□□□□□ -0.66
SRGAP1-202ENST00000537556 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
SRGAP1-202ENST00000537556 OFD1O75665 1012 aa10.94□□□□□ -0.66
SRGAP1-202ENST00000537556 GRPEL1Q9HAV7 217 aa10.94□□□□□ -0.66
SRGAP1-202ENST00000537556 KIF20AO95235 890 aa10.93□□□□□ -0.66
SRGAP1-202ENST00000537556 FAM50AQ14320 339 aaKnown RBP10.93□□□□□ -0.66
SRGAP1-202ENST00000537556 MAP3K1Q13233 1512 aa10.93□□□□□ -0.66
SRGAP1-202ENST00000537556 RIPK4P57078 832 aa10.92□□□□□ -0.66
SRGAP1-202ENST00000537556 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
SRGAP1-202ENST00000537556 CENPQQ7L2Z9 268 aaPredicted RBP10.92□□□□□ -0.66
SRGAP1-202ENST00000537556 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
SRGAP1-202ENST00000537556 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
SRGAP1-202ENST00000537556 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
SRGAP1-202ENST00000537556 SLKQ9H2G2 1235 aaPredicted RBP10.9□□□□□ -0.66
SRGAP1-202ENST00000537556 TAF3Q5VWG9 929 aa10.9□□□□□ -0.66
SRGAP1-202ENST00000537556 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
SRGAP1-202ENST00000537556 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
SRGAP1-202ENST00000537556 MCM4P33991 863 aa10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 ANP32BQ92688 251 aaKnown RBP10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 MSNP26038 577 aaKnown RBP10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 PNISRQ8TF01 805 aaKnown RBP10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 UACAQ9BZF9 1416 aa10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 ZSCAN30Q86W11 494 aa10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
SRGAP1-202ENST00000537556 TRAK2O60296 914 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 KDM5BQ9UGL1 1544 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 DYNC1I1O14576 645 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 LETM1O95202 739 aaPredicted RBP10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 AEBP2Q6ZN18 517 aaPredicted RBP10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 TMEM51Q9NW97 253 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
SRGAP1-202ENST00000537556 SKAP1Q86WV1 359 aa10.87□□□□□ -0.67
SRGAP1-202ENST00000537556 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
SRGAP1-202ENST00000537556 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
SRGAP1-202ENST00000537556 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
SRGAP1-202ENST00000537556 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 CCDC94Q9BW85 323 aaPredicted RBP10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 PRDM10Q9NQV6 1147 aa10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 CCDC173Q0VFZ6 552 aa10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 CRBNQ96SW2 442 aa10.86□□□□□ -0.67
SRGAP1-202ENST00000537556 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
SRGAP1-202ENST00000537556 CDK11BP21127 795 aaKnown RBP10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 R3HCC1Q9Y3T6 440 aaKnown RBP10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 UQCRHLA0A096LP55 91 aa10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 UQCRHP07919 91 aa10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
SRGAP1-202ENST00000537556 CCDC18Q5T9S5 1454 aa10.83□□□□□ -0.68
SRGAP1-202ENST00000537556 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
SRGAP1-202ENST00000537556 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
SRGAP1-202ENST00000537556 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
SRGAP1-202ENST00000537556 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
SRGAP1-202ENST00000537556 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
SRGAP1-202ENST00000537556 PPP1R9BQ96SB3 815 aa10.81□□□□□ -0.68
SRGAP1-202ENST00000537556 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
SRGAP1-202ENST00000537556 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms