RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.37■■□□□ 1.81
LPCAT3-206ENST00000537179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
LPCAT3-206ENST00000537179 HNRNPUL2Q1KMD3 747 aaKnown RBP26.36■■□□□ 1.81
LPCAT3-206ENST00000537179 DMRT2Q9Y5R5 561 aa26.34■■□□□ 1.81
LPCAT3-206ENST00000537179 LTBP4Q8N2S1 1624 aa26.32■■□□□ 1.8
LPCAT3-206ENST00000537179 SETD1BQ9UPS6 1966 aaKnown RBP26.3■■□□□ 1.8
LPCAT3-206ENST00000537179 UHRF1BP1Q6BDS2 1440 aa26.29■■□□□ 1.8
LPCAT3-206ENST00000537179 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
LPCAT3-206ENST00000537179 PTPRTO14522 1441 aa26.27■■□□□ 1.8
LPCAT3-206ENST00000537179 IQSEC2Q5JU85 1478 aa26.27■■□□□ 1.8
LPCAT3-206ENST00000537179 C9orf84Q5VXU9 1444 aa26.26■■□□□ 1.79
LPCAT3-206ENST00000537179 ATP10AO60312 1499 aa26.24■■□□□ 1.79
LPCAT3-206ENST00000537179 C3P01024 1663 aa26.21■■□□□ 1.79
LPCAT3-206ENST00000537179 PLEKHD1A6NEE1 506 aa26.19■■□□□ 1.78
LPCAT3-206ENST00000537179 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
LPCAT3-206ENST00000537179 MYO5CQ9NQX4 1742 aa26.13■■□□□ 1.77
LPCAT3-206ENST00000537179 PLCH2O75038 1416 aa26.1■■□□□ 1.77
LPCAT3-206ENST00000537179 NCOA1Q15788 1441 aa26.08■■□□□ 1.77
LPCAT3-206ENST00000537179 KDM5CP41229 1560 aa26.07■■□□□ 1.76
LPCAT3-206ENST00000537179 DIP2CQ9Y2E4 1556 aa26.07■■□□□ 1.76
LPCAT3-206ENST00000537179 CDK13Q14004 1512 aaKnown RBP26.07■■□□□ 1.76
LPCAT3-206ENST00000537179 REREQ9P2R6 1566 aa26.07■■□□□ 1.76
LPCAT3-206ENST00000537179 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
LPCAT3-206ENST00000537179 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
LPCAT3-206ENST00000537179 CAMSAP1Q5T5Y3 1602 aa25.99■■□□□ 1.75
LPCAT3-206ENST00000537179 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
LPCAT3-206ENST00000537179 TRAPPC8Q9Y2L5 1435 aa25.98■■□□□ 1.75
LPCAT3-206ENST00000537179 UBAP1LF5GYI3 381 aa25.96■■□□□ 1.75
LPCAT3-206ENST00000537179 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
LPCAT3-206ENST00000537179 KIF14Q15058 1648 aa25.96■■□□□ 1.75
LPCAT3-206ENST00000537179 AGLP35573 1532 aa25.94■■□□□ 1.74
LPCAT3-206ENST00000537179 EFCAB2Q5VUJ9 269 aa25.93■■□□□ 1.74
LPCAT3-206ENST00000537179 ZNF335Q9H4Z2 1342 aaPredicted RBP25.91■■□□□ 1.74
LPCAT3-206ENST00000537179 MROH2AA6NES4 1674 aa25.9■■□□□ 1.74
LPCAT3-206ENST00000537179 ARHGAP5Q13017 1502 aa25.9■■□□□ 1.74
LPCAT3-206ENST00000537179 SUPT6HQ7KZ85 1726 aaKnown RBP25.9■■□□□ 1.74
LPCAT3-206ENST00000537179 AFAP1Q8N556 730 aa25.89■■□□□ 1.74
LPCAT3-206ENST00000537179 ZNF142P52746 1687 aaPredicted RBP25.88■■□□□ 1.73
LPCAT3-206ENST00000537179 MLH3Q9UHC1 1453 aa25.86■■□□□ 1.73
LPCAT3-206ENST00000537179 CNTLNQ9NXG0 1405 aa25.85■■□□□ 1.73
LPCAT3-206ENST00000537179 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
LPCAT3-206ENST00000537179 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
LPCAT3-206ENST00000537179 ESF1Q9H501 851 aaKnown RBP25.84■■□□□ 1.73
LPCAT3-206ENST00000537179 MYT1LQ9UL68 1186 aa25.84■■□□□ 1.73
LPCAT3-206ENST00000537179 MYO3AQ8NEV4 1616 aa25.84■■□□□ 1.73
LPCAT3-206ENST00000537179 NPATQ14207 1427 aa25.83■■□□□ 1.73
LPCAT3-206ENST00000537179 ITSN2Q9NZM3 1697 aa25.83■■□□□ 1.73
LPCAT3-206ENST00000537179 KIDINS220Q9ULH0 1771 aa25.82■■□□□ 1.72
LPCAT3-206ENST00000537179 NCKAP5LQ9HCH0 1330 aa25.82■■□□□ 1.72
LPCAT3-206ENST00000537179 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
LPCAT3-206ENST00000537179 ABCC1P33527 1531 aa25.78■■□□□ 1.72
LPCAT3-206ENST00000537179 TCOF1Q13428 1488 aaKnown RBP25.78■■□□□ 1.72
LPCAT3-206ENST00000537179 HSPA1LP34931 641 aa25.76■■□□□ 1.71
LPCAT3-206ENST00000537179 CEP170BQ9Y4F5 1589 aaPredicted RBP25.76■■□□□ 1.71
LPCAT3-206ENST00000537179 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
LPCAT3-206ENST00000537179 LRRIQ1Q96JM4 1722 aa25.74■■□□□ 1.71
LPCAT3-206ENST00000537179 CLTCQ00610 1675 aaKnown RBP25.74■■□□□ 1.71
LPCAT3-206ENST00000537179 TROQ12816 1431 aaPredicted RBP25.72■■□□□ 1.71
LPCAT3-206ENST00000537179 PKD2Q13563 968 aa25.7■■□□□ 1.7
LPCAT3-206ENST00000537179 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
LPCAT3-206ENST00000537179 ZMYM3Q14202 1370 aa25.68■■□□□ 1.7
LPCAT3-206ENST00000537179 POLR1AO95602 1720 aaPredicted RBP25.67■■□□□ 1.7
LPCAT3-206ENST00000537179 CLIP1P30622 1438 aa25.66■■□□□ 1.7
LPCAT3-206ENST00000537179 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
LPCAT3-206ENST00000537179 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
LPCAT3-206ENST00000537179 ATP1B4Q9UN42 357 aaPredicted RBP25.64■■□□□ 1.7
LPCAT3-206ENST00000537179 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
LPCAT3-206ENST00000537179 PHF23Q9BUL5 403 aaPredicted RBP25.63■■□□□ 1.69
LPCAT3-206ENST00000537179 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
LPCAT3-206ENST00000537179 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
LPCAT3-206ENST00000537179 CPS1P31327 1500 aa25.63■■□□□ 1.69
LPCAT3-206ENST00000537179 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
LPCAT3-206ENST00000537179 EEA1Q15075 1411 aa25.62■■□□□ 1.69
LPCAT3-206ENST00000537179 PTPRKQ15262 1439 aa25.61■■□□□ 1.69
LPCAT3-206ENST00000537179 ALKQ9UM73 1620 aa25.6■■□□□ 1.69
LPCAT3-206ENST00000537179 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
LPCAT3-206ENST00000537179 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
LPCAT3-206ENST00000537179 PLXNC1O60486 1568 aa25.58■■□□□ 1.69
LPCAT3-206ENST00000537179 TOM1O60784 492 aa25.58■■□□□ 1.69
LPCAT3-206ENST00000537179 ARHGAP35Q9NRY4 1499 aa25.53■■□□□ 1.68
LPCAT3-206ENST00000537179 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
LPCAT3-206ENST00000537179 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
LPCAT3-206ENST00000537179 SYCP2Q9BX26 1530 aa25.51■■□□□ 1.67
LPCAT3-206ENST00000537179 INO80Q9ULG1 1556 aaPredicted RBP25.51■■□□□ 1.67
LPCAT3-206ENST00000537179 ATP7AQ04656 1500 aa25.5■■□□□ 1.67
LPCAT3-206ENST00000537179 VWDEQ8N2E2 1590 aa25.49■■□□□ 1.67
LPCAT3-206ENST00000537179 A2MP01023 1474 aa25.44■■□□□ 1.66
LPCAT3-206ENST00000537179 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
LPCAT3-206ENST00000537179 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
LPCAT3-206ENST00000537179 STRCP1A6NGW2 1772 aa25.4■■□□□ 1.66
LPCAT3-206ENST00000537179 RNF17Q9BXT8 1623 aaKnown RBP25.4■■□□□ 1.66
LPCAT3-206ENST00000537179 CCDC18Q5T9S5 1454 aa25.38■■□□□ 1.65
LPCAT3-206ENST00000537179 GGT6Q6P531 493 aa25.37■■□□□ 1.65
LPCAT3-206ENST00000537179 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
LPCAT3-206ENST00000537179 DEPDC5O75140 1603 aa25.35■■□□□ 1.65
LPCAT3-206ENST00000537179 RGS17Q9UGC6 210 aaPredicted RBP25.35■■□□□ 1.65
LPCAT3-206ENST00000537179 SYNMO15061 1565 aa25.35■■□□□ 1.65
LPCAT3-206ENST00000537179 IQGAP1P46940 1657 aa25.34■■□□□ 1.65
LPCAT3-206ENST00000537179 ZNF777Q9ULD5 760 aaPredicted RBP25.34■■□□□ 1.65
LPCAT3-206ENST00000537179 HNRNPMP52272 730 aaKnown RBP eCLIP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms