RNA–Protein interactions for RNA: ENST00000536108.5

KDM4C-214, Transcript of lysine demethylase 4C, humanhuman

TSL 1 (best) BASIC

Gene KDM4C, Length 3,406 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-214ENST00000536108 CDK13Q14004 1512 aaKnown RBP8.08□□□□□ -1.12
KDM4C-214ENST00000536108 ATP1B4Q9UN42 357 aaPredicted RBP8.07□□□□□ -1.12
KDM4C-214ENST00000536108 ABCC5O15440 1437 aa8.07□□□□□ -1.12
KDM4C-214ENST00000536108 IFT140Q96RY7 1462 aa8.07□□□□□ -1.12
KDM4C-214ENST00000536108 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
KDM4C-214ENST00000536108 NEFLP07196 543 aa8.06□□□□□ -1.12
KDM4C-214ENST00000536108 HSPA5P11021 654 aaKnown RBP8.06□□□□□ -1.12
KDM4C-214ENST00000536108 MPHOSPH9Q99550 1183 aa8.06□□□□□ -1.12
KDM4C-214ENST00000536108 CCDC7Q96M83 1385 aa8.05□□□□□ -1.12
KDM4C-214ENST00000536108 PZPP20742 1482 aa8.04□□□□□ -1.12
KDM4C-214ENST00000536108 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
KDM4C-214ENST00000536108 KIF14Q15058 1648 aa8.04□□□□□ -1.12
KDM4C-214ENST00000536108 KDM5DQ9BY66 1539 aa8.04□□□□□ -1.12
KDM4C-214ENST00000536108 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
KDM4C-214ENST00000536108 HIRIP3Q9BW71 556 aaPredicted RBP8.03□□□□□ -1.12
KDM4C-214ENST00000536108 ARID4BQ4LE39 1312 aaPredicted RBP8.03□□□□□ -1.12
KDM4C-214ENST00000536108 FANCIQ9NVI1 1328 aa8.03□□□□□ -1.12
KDM4C-214ENST00000536108 UHRF1BP1Q6BDS2 1440 aa8.02□□□□□ -1.12
KDM4C-214ENST00000536108 SHANK2Q9UPX8 1470 aa8.02□□□□□ -1.13
KDM4C-214ENST00000536108 KDM5CP41229 1560 aa8.02□□□□□ -1.13
KDM4C-214ENST00000536108 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
KDM4C-214ENST00000536108 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
KDM4C-214ENST00000536108 L3MBTL2Q969R5 705 aa8.01□□□□□ -1.13
KDM4C-214ENST00000536108 TROQ12816 1431 aaPredicted RBP8.01□□□□□ -1.13
KDM4C-214ENST00000536108 ZBED9Q6R2W3 1325 aa8.01□□□□□ -1.13
KDM4C-214ENST00000536108 ARHGEF12Q9NZN5 1544 aa8.01□□□□□ -1.13
KDM4C-214ENST00000536108 PRKRIP1Q9H875 184 aaPredicted RBP8.01□□□□□ -1.13
KDM4C-214ENST00000536108 CAMSAP2Q08AD1 1489 aa8.01□□□□□ -1.13
KDM4C-214ENST00000536108 EIF4G3O43432 1585 aaKnown RBP8□□□□□ -1.13
KDM4C-214ENST00000536108 RRP7BPQ9NSQ0 103 aa8□□□□□ -1.13
KDM4C-214ENST00000536108 BCORL1Q5H9F3 1711 aa8□□□□□ -1.13
KDM4C-214ENST00000536108 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
KDM4C-214ENST00000536108 E9PCH4 1651 aa8□□□□□ -1.13
KDM4C-214ENST00000536108 CDC42BPAQ5VT25 1732 aa8□□□□□ -1.13
KDM4C-214ENST00000536108 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
KDM4C-214ENST00000536108 DHX29Q7Z478 1369 aaKnown RBP7.99□□□□□ -1.13
KDM4C-214ENST00000536108 KIAA1107Q9UPP5 1409 aa7.99□□□□□ -1.13
KDM4C-214ENST00000536108 C11orf95C9JLR9 678 aaPredicted RBP7.99□□□□□ -1.13
KDM4C-214ENST00000536108 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
KDM4C-214ENST00000536108 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
KDM4C-214ENST00000536108 CEP170Q5SW79 1584 aa7.98□□□□□ -1.13
KDM4C-214ENST00000536108 BCANQ96GW7 911 aa7.98□□□□□ -1.13
KDM4C-214ENST00000536108 ABCA8O94911 1581 aa7.98□□□□□ -1.13
KDM4C-214ENST00000536108 ARHGEF5Q12774 1597 aa7.98□□□□□ -1.13
KDM4C-214ENST00000536108 PTPRGP23470 1445 aa7.97□□□□□ -1.13
KDM4C-214ENST00000536108 SMG6Q86US8 1419 aaKnown RBP7.97□□□□□ -1.13
KDM4C-214ENST00000536108 RALGAPBQ86X10 1494 aa7.97□□□□□ -1.13
KDM4C-214ENST00000536108 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
KDM4C-214ENST00000536108 ZNF608Q9ULD9 1512 aaPredicted RBP7.97□□□□□ -1.13
KDM4C-214ENST00000536108 ABCC10Q5T3U5 1492 aa7.97□□□□□ -1.13
KDM4C-214ENST00000536108 KIF7Q2M1P5 1343 aa7.97□□□□□ -1.13
KDM4C-214ENST00000536108 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
KDM4C-214ENST00000536108 NUP160Q12769 1436 aa7.96□□□□□ -1.13
KDM4C-214ENST00000536108 LAMC1P11047 1609 aa7.96□□□□□ -1.13
KDM4C-214ENST00000536108 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
KDM4C-214ENST00000536108 CDK11AQ9UQ88 783 aaPredicted RBP7.96□□□□□ -1.14
KDM4C-214ENST00000536108 SYNJ2O15056 1496 aa7.95□□□□□ -1.14
KDM4C-214ENST00000536108 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
KDM4C-214ENST00000536108 KTN1Q86UP2 1357 aaKnown RBP7.95□□□□□ -1.14
KDM4C-214ENST00000536108 CCDC184Q52MB2 194 aa7.94□□□□□ -1.14
KDM4C-214ENST00000536108 MSH5O43196 834 aa7.94□□□□□ -1.14
KDM4C-214ENST00000536108 ZMYM4Q5VZL5 1548 aa7.94□□□□□ -1.14
KDM4C-214ENST00000536108 MAST1Q9Y2H9 1570 aa7.93□□□□□ -1.14
KDM4C-214ENST00000536108 PRG4Q92954 1404 aaPredicted RBP7.93□□□□□ -1.14
KDM4C-214ENST00000536108 INSRP06213 1382 aa7.93□□□□□ -1.14
KDM4C-214ENST00000536108 ANKRD30AQ9BXX3 1397 aa7.93□□□□□ -1.14
KDM4C-214ENST00000536108 LRPPRCP42704 1394 aaKnown RBP7.92□□□□□ -1.14
KDM4C-214ENST00000536108 DNAJC5BQ9UF47 199 aa7.92□□□□□ -1.14
KDM4C-214ENST00000536108 SLC4A1APQ9BWU0 796 aaKnown RBP7.91□□□□□ -1.14
KDM4C-214ENST00000536108 UNC13BO14795 1591 aa7.91□□□□□ -1.14
KDM4C-214ENST00000536108 ZNF644Q9H582 1327 aaPredicted RBP7.91□□□□□ -1.14
KDM4C-214ENST00000536108 TRPM1Q7Z4N2 1603 aa7.91□□□□□ -1.14
KDM4C-214ENST00000536108 USP47Q96K76 1375 aa7.91□□□□□ -1.14
KDM4C-214ENST00000536108 PLB1Q6P1J6 1458 aa7.91□□□□□ -1.14
KDM4C-214ENST00000536108 ANKRD50Q9ULJ7 1429 aa7.91□□□□□ -1.14
KDM4C-214ENST00000536108 CARMIL2Q6F5E8 1435 aa7.9□□□□□ -1.14
KDM4C-214ENST00000536108 PREX2Q70Z35 1606 aa7.9□□□□□ -1.14
KDM4C-214ENST00000536108 FOXD1Q16676 465 aa7.9□□□□□ -1.14
KDM4C-214ENST00000536108 MRS2Q9HD23 443 aa7.9□□□□□ -1.14
KDM4C-214ENST00000536108 CDC42BPBQ9Y5S2 1711 aa7.89□□□□□ -1.15
KDM4C-214ENST00000536108 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
KDM4C-214ENST00000536108 C9orf84Q5VXU9 1444 aa7.89□□□□□ -1.15
KDM4C-214ENST00000536108 ATP10BO94823 1461 aa7.89□□□□□ -1.15
KDM4C-214ENST00000536108 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
KDM4C-214ENST00000536108 PLXNC1O60486 1568 aa7.88□□□□□ -1.15
KDM4C-214ENST00000536108 BRD4O60885 1362 aaPredicted RBP7.88□□□□□ -1.15
KDM4C-214ENST00000536108 NUDCQ9Y266 331 aa7.88□□□□□ -1.15
KDM4C-214ENST00000536108 KIF15Q9NS87 1388 aa7.87□□□□□ -1.15
KDM4C-214ENST00000536108 SAMD9LQ8IVG5 1584 aa7.87□□□□□ -1.15
KDM4C-214ENST00000536108 ATP10AO60312 1499 aa7.87□□□□□ -1.15
KDM4C-214ENST00000536108 GPRASP1Q5JY77 1395 aa7.87□□□□□ -1.15
KDM4C-214ENST00000536108 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
KDM4C-214ENST00000536108 IQGAP3Q86VI3 1631 aa7.87□□□□□ -1.15
KDM4C-214ENST00000536108 MAGI2Q86UL8 1455 aa7.86□□□□□ -1.15
KDM4C-214ENST00000536108 PRDM15P57071 1507 aaPredicted RBP7.86□□□□□ -1.15
KDM4C-214ENST00000536108 FAM135AQ9P2D6 1515 aa7.86□□□□□ -1.15
KDM4C-214ENST00000536108 EIF2AK4Q9P2K8 1649 aaKnown RBP7.86□□□□□ -1.15
KDM4C-214ENST00000536108 RNF17Q9BXT8 1623 aaKnown RBP7.85□□□□□ -1.15
KDM4C-214ENST00000536108 SHROOM2Q13796 1616 aa7.85□□□□□ -1.15
KDM4C-214ENST00000536108 PKD2Q13563 968 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms