RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 GCC2Q8IWJ2 1684 aa19.66■□□□□ 0.74
NEK4-207ENST00000535191 CFDP1Q9UEE9 299 aaPredicted RBP19.66■□□□□ 0.74
NEK4-207ENST00000535191 KDM6BO15054 1643 aa19.65■□□□□ 0.74
NEK4-207ENST00000535191 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
NEK4-207ENST00000535191 PLEKHD1A6NEE1 506 aa19.61■□□□□ 0.73
NEK4-207ENST00000535191 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
NEK4-207ENST00000535191 ZNF777Q9ULD5 760 aaPredicted RBP19.6■□□□□ 0.73
NEK4-207ENST00000535191 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
NEK4-207ENST00000535191 FOXD1Q16676 465 aa19.59■□□□□ 0.73
NEK4-207ENST00000535191 GPATCH8Q9UKJ3 1502 aaKnown RBP19.59■□□□□ 0.73
NEK4-207ENST00000535191 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.72
NEK4-207ENST00000535191 ITSN2Q9NZM3 1697 aa19.55■□□□□ 0.72
NEK4-207ENST00000535191 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
NEK4-207ENST00000535191 ABCA8O94911 1581 aa19.55■□□□□ 0.72
NEK4-207ENST00000535191 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
NEK4-207ENST00000535191 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
NEK4-207ENST00000535191 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
NEK4-207ENST00000535191 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
NEK4-207ENST00000535191 ATP10BO94823 1461 aa19.53■□□□□ 0.72
NEK4-207ENST00000535191 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
NEK4-207ENST00000535191 ANP32CO43423 234 aa19.52■□□□□ 0.72
NEK4-207ENST00000535191 NCOA1Q15788 1441 aa19.52■□□□□ 0.71
NEK4-207ENST00000535191 KIF14Q15058 1648 aa19.51■□□□□ 0.71
NEK4-207ENST00000535191 PTPRGP23470 1445 aa19.5■□□□□ 0.71
NEK4-207ENST00000535191 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
NEK4-207ENST00000535191 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
NEK4-207ENST00000535191 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.71
NEK4-207ENST00000535191 ANKRD30AQ9BXX3 1397 aa19.46■□□□□ 0.71
NEK4-207ENST00000535191 CHD1O14646 1710 aa19.45■□□□□ 0.7
NEK4-207ENST00000535191 ABCC10Q5T3U5 1492 aa19.45■□□□□ 0.7
NEK4-207ENST00000535191 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
NEK4-207ENST00000535191 ADGRL2O95490 1459 aa19.44■□□□□ 0.7
NEK4-207ENST00000535191 PZPP20742 1482 aa19.42■□□□□ 0.7
NEK4-207ENST00000535191 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
NEK4-207ENST00000535191 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
NEK4-207ENST00000535191 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
NEK4-207ENST00000535191 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
NEK4-207ENST00000535191 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
NEK4-207ENST00000535191 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
NEK4-207ENST00000535191 CROCC2H7BZ55 1655 aa19.38■□□□□ 0.69
NEK4-207ENST00000535191 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
NEK4-207ENST00000535191 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
NEK4-207ENST00000535191 PKD2Q13563 968 aa19.38■□□□□ 0.69
NEK4-207ENST00000535191 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
NEK4-207ENST00000535191 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
NEK4-207ENST00000535191 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
NEK4-207ENST00000535191 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
NEK4-207ENST00000535191 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
NEK4-207ENST00000535191 SHANK2Q9UPX8 1470 aa19.33■□□□□ 0.69
NEK4-207ENST00000535191 NUP155O75694 1391 aa19.32■□□□□ 0.68
NEK4-207ENST00000535191 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
NEK4-207ENST00000535191 RSPH4AQ5TD94 716 aa19.31■□□□□ 0.68
NEK4-207ENST00000535191 MBD5Q9P267 1494 aa19.29■□□□□ 0.68
NEK4-207ENST00000535191 KIF15Q9NS87 1388 aa19.27■□□□□ 0.68
NEK4-207ENST00000535191 CCDC7Q96M83 1385 aa19.27■□□□□ 0.68
NEK4-207ENST00000535191 ARHGEF5Q12774 1597 aa19.26■□□□□ 0.67
NEK4-207ENST00000535191 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
NEK4-207ENST00000535191 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
NEK4-207ENST00000535191 PREX2Q70Z35 1606 aa19.24■□□□□ 0.67
NEK4-207ENST00000535191 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
NEK4-207ENST00000535191 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
NEK4-207ENST00000535191 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
NEK4-207ENST00000535191 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
NEK4-207ENST00000535191 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
NEK4-207ENST00000535191 SAMD9LQ8IVG5 1584 aa19.2■□□□□ 0.66
NEK4-207ENST00000535191 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
NEK4-207ENST00000535191 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
NEK4-207ENST00000535191 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
NEK4-207ENST00000535191 ARHGAP5Q13017 1502 aa19.17■□□□□ 0.66
NEK4-207ENST00000535191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
NEK4-207ENST00000535191 PRKRIP1Q9H875 184 aaPredicted RBP19.16■□□□□ 0.66
NEK4-207ENST00000535191 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
NEK4-207ENST00000535191 UHRF1BP1LA0JNW5 1464 aa19.14■□□□□ 0.65
NEK4-207ENST00000535191 USP47Q96K76 1375 aa19.14■□□□□ 0.65
NEK4-207ENST00000535191 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
NEK4-207ENST00000535191 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
NEK4-207ENST00000535191 FKBP8Q14318 412 aa19.13■□□□□ 0.65
NEK4-207ENST00000535191 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
NEK4-207ENST00000535191 PLEKHH2Q8IVE3 1493 aa19.13■□□□□ 0.65
NEK4-207ENST00000535191 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
NEK4-207ENST00000535191 MYO5CQ9NQX4 1742 aa19.12■□□□□ 0.65
NEK4-207ENST00000535191 CCDC184Q52MB2 194 aa19.12■□□□□ 0.65
NEK4-207ENST00000535191 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
NEK4-207ENST00000535191 EFCAB2Q5VUJ9 269 aa19.11■□□□□ 0.65
NEK4-207ENST00000535191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.11■□□□□ 0.652e-6■■□□□ 11.6
NEK4-207ENST00000535191 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
NEK4-207ENST00000535191 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
NEK4-207ENST00000535191 ZCCHC11Q5TAX3 1644 aaKnown RBP19.09■□□□□ 0.65
NEK4-207ENST00000535191 PLCH2O75038 1416 aa19.09■□□□□ 0.65
NEK4-207ENST00000535191 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.65
NEK4-207ENST00000535191 NEFLP07196 543 aa19.08■□□□□ 0.65
NEK4-207ENST00000535191 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
NEK4-207ENST00000535191 ARID4BQ4LE39 1312 aaPredicted RBP19.08■□□□□ 0.64
NEK4-207ENST00000535191 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
NEK4-207ENST00000535191 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
NEK4-207ENST00000535191 RALGAPBQ86X10 1494 aa19.06■□□□□ 0.64
NEK4-207ENST00000535191 BCANQ96GW7 911 aa19.05■□□□□ 0.64
NEK4-207ENST00000535191 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
NEK4-207ENST00000535191 CCDC144AA2RUR9 1427 aa19.03■□□□□ 0.64
NEK4-207ENST00000535191 PLXNC1O60486 1568 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms