RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-204ENST00000535180 HECW1Q76N89 1606 aa18.8■□□□□ 0.6
VAMP1-204ENST00000535180 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
VAMP1-204ENST00000535180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-204ENST00000535180 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
VAMP1-204ENST00000535180 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
VAMP1-204ENST00000535180 ATP10AO60312 1499 aa18.73■□□□□ 0.59
VAMP1-204ENST00000535180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.71■□□□□ 0.59
VAMP1-204ENST00000535180 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
VAMP1-204ENST00000535180 C3P01024 1663 aa18.7■□□□□ 0.58
VAMP1-204ENST00000535180 MED1Q15648 1581 aaPredicted RBP18.69■□□□□ 0.58
VAMP1-204ENST00000535180 UBAP1LF5GYI3 381 aa18.69■□□□□ 0.58
VAMP1-204ENST00000535180 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
VAMP1-204ENST00000535180 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
VAMP1-204ENST00000535180 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
VAMP1-204ENST00000535180 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
VAMP1-204ENST00000535180 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
VAMP1-204ENST00000535180 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
VAMP1-204ENST00000535180 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
VAMP1-204ENST00000535180 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
VAMP1-204ENST00000535180 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
VAMP1-204ENST00000535180 PLCH2O75038 1416 aa18.57■□□□□ 0.56
VAMP1-204ENST00000535180 HSPA1LP34931 641 aa18.55■□□□□ 0.56
VAMP1-204ENST00000535180 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
VAMP1-204ENST00000535180 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
VAMP1-204ENST00000535180 DIP2CQ9Y2E4 1556 aa18.52■□□□□ 0.56
VAMP1-204ENST00000535180 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.55
VAMP1-204ENST00000535180 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
VAMP1-204ENST00000535180 KDM5CP41229 1560 aa18.51■□□□□ 0.55
VAMP1-204ENST00000535180 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
VAMP1-204ENST00000535180 ESF1Q9H501 851 aaKnown RBP18.51■□□□□ 0.55
VAMP1-204ENST00000535180 AGLP35573 1532 aa18.5■□□□□ 0.55
VAMP1-204ENST00000535180 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
VAMP1-204ENST00000535180 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
VAMP1-204ENST00000535180 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
VAMP1-204ENST00000535180 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
VAMP1-204ENST00000535180 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
VAMP1-204ENST00000535180 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
VAMP1-204ENST00000535180 MROH2AA6NES4 1674 aa18.45■□□□□ 0.54
VAMP1-204ENST00000535180 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
VAMP1-204ENST00000535180 PKD2Q13563 968 aa18.45■□□□□ 0.54
VAMP1-204ENST00000535180 NPATQ14207 1427 aa18.45■□□□□ 0.54
VAMP1-204ENST00000535180 PLA2R1Q13018 1463 aa18.45■□□□□ 0.54
VAMP1-204ENST00000535180 TOM1O60784 492 aa18.44■□□□□ 0.54
VAMP1-204ENST00000535180 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
VAMP1-204ENST00000535180 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-204ENST00000535180 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
VAMP1-204ENST00000535180 MLH3Q9UHC1 1453 aa18.41■□□□□ 0.54
VAMP1-204ENST00000535180 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
VAMP1-204ENST00000535180 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
VAMP1-204ENST00000535180 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
VAMP1-204ENST00000535180 CPS1P31327 1500 aa18.36■□□□□ 0.53
VAMP1-204ENST00000535180 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
VAMP1-204ENST00000535180 CEP170BQ9Y4F5 1589 aaPredicted RBP18.36■□□□□ 0.53
VAMP1-204ENST00000535180 ZMYM3Q14202 1370 aa18.35■□□□□ 0.53
VAMP1-204ENST00000535180 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
VAMP1-204ENST00000535180 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
VAMP1-204ENST00000535180 KIF14Q15058 1648 aa18.34■□□□□ 0.53
VAMP1-204ENST00000535180 CDC42BPBQ9Y5S2 1711 aa18.33■□□□□ 0.52
VAMP1-204ENST00000535180 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
VAMP1-204ENST00000535180 CLTCQ00610 1675 aaKnown RBP18.31■□□□□ 0.52
VAMP1-204ENST00000535180 PTPRKQ15262 1439 aa18.31■□□□□ 0.52
VAMP1-204ENST00000535180 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
VAMP1-204ENST00000535180 RGS17Q9UGC6 210 aaPredicted RBP18.3■□□□□ 0.52
VAMP1-204ENST00000535180 ITSN2Q9NZM3 1697 aa18.29■□□□□ 0.52
VAMP1-204ENST00000535180 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
VAMP1-204ENST00000535180 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
VAMP1-204ENST00000535180 ABCC1P33527 1531 aa18.25■□□□□ 0.51
VAMP1-204ENST00000535180 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
VAMP1-204ENST00000535180 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
VAMP1-204ENST00000535180 NEURL4Q96JN8 1562 aa18.23■□□□□ 0.51
VAMP1-204ENST00000535180 A2ML1A8K2U0 1454 aa18.21■□□□□ 0.51
VAMP1-204ENST00000535180 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
VAMP1-204ENST00000535180 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
VAMP1-204ENST00000535180 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
VAMP1-204ENST00000535180 CLIP1P30622 1438 aa18.17■□□□□ 0.5
VAMP1-204ENST00000535180 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
VAMP1-204ENST00000535180 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
VAMP1-204ENST00000535180 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
VAMP1-204ENST00000535180 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
VAMP1-204ENST00000535180 RNF17Q9BXT8 1623 aaKnown RBP18.14■□□□□ 0.49
VAMP1-204ENST00000535180 POTEAQ6S8J7 498 aa18.14■□□□□ 0.49
VAMP1-204ENST00000535180 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.49
VAMP1-204ENST00000535180 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
VAMP1-204ENST00000535180 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
VAMP1-204ENST00000535180 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
VAMP1-204ENST00000535180 SETD1AO15047 1707 aaKnown RBP18.12■□□□□ 0.49
VAMP1-204ENST00000535180 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
VAMP1-204ENST00000535180 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
VAMP1-204ENST00000535180 GGT6Q6P531 493 aa18.09■□□□□ 0.49
VAMP1-204ENST00000535180 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
VAMP1-204ENST00000535180 SYNMO15061 1565 aa18.08■□□□□ 0.49
VAMP1-204ENST00000535180 MED14O60244 1454 aa18.08■□□□□ 0.49
VAMP1-204ENST00000535180 SPAG9O60271 1321 aaKnown RBP18.08■□□□□ 0.49
VAMP1-204ENST00000535180 ATP7AQ04656 1500 aa18.08■□□□□ 0.48
VAMP1-204ENST00000535180 A2MP01023 1474 aa18.07■□□□□ 0.48
VAMP1-204ENST00000535180 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
VAMP1-204ENST00000535180 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
VAMP1-204ENST00000535180 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
VAMP1-204ENST00000535180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms