RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
CTSB-232ENST00000534510 ABCC5O15440 1437 aa24.62■■□□□ 1.53
CTSB-232ENST00000534510 EIF4G2P78344 907 aaKnown RBP eCLIP24.61■■□□□ 1.53
CTSB-232ENST00000534510 BCANQ96GW7 911 aa24.6■■□□□ 1.53
CTSB-232ENST00000534510 WASHC2AQ641Q2 1341 aa24.6■■□□□ 1.53
CTSB-232ENST00000534510 RPRD2Q5VT52 1461 aaKnown RBP24.59■■□□□ 1.53
CTSB-232ENST00000534510 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.53
CTSB-232ENST00000534510 ITSN2Q9NZM3 1697 aa24.58■■□□□ 1.52
CTSB-232ENST00000534510 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
CTSB-232ENST00000534510 ANKRD30BQ9BXX2 1392 aa24.56■■□□□ 1.52
CTSB-232ENST00000534510 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
CTSB-232ENST00000534510 L3MBTL2Q969R5 705 aa24.56■■□□□ 1.52
CTSB-232ENST00000534510 ADGBQ8N7X0 1667 aa24.55■■□□□ 1.52
CTSB-232ENST00000534510 TEX14Q8IWB6 1497 aa24.54■■□□□ 1.52
CTSB-232ENST00000534510 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
CTSB-232ENST00000534510 ADCY10Q96PN6 1610 aa24.52■■□□□ 1.52
CTSB-232ENST00000534510 NCOA1Q15788 1441 aa24.51■■□□□ 1.51
CTSB-232ENST00000534510 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
CTSB-232ENST00000534510 FOXD1Q16676 465 aa24.5■■□□□ 1.51
CTSB-232ENST00000534510 CAMSAP2Q08AD1 1489 aa24.5■■□□□ 1.51
CTSB-232ENST00000534510 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
CTSB-232ENST00000534510 ZNF644Q9H582 1327 aaPredicted RBP24.48■■□□□ 1.51
CTSB-232ENST00000534510 CROCC2H7BZ55 1655 aa24.48■■□□□ 1.51
CTSB-232ENST00000534510 CCDC7Q96M83 1385 aa24.47■■□□□ 1.51
CTSB-232ENST00000534510 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
CTSB-232ENST00000534510 HNRNPUQ00839 825 aaKnown RBP eCLIP24.45■■□□□ 1.51
CTSB-232ENST00000534510 PRG4Q92954 1404 aaPredicted RBP24.45■■□□□ 1.5
CTSB-232ENST00000534510 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
CTSB-232ENST00000534510 PZPP20742 1482 aa24.44■■□□□ 1.5
CTSB-232ENST00000534510 ADGRL2O95490 1459 aa24.43■■□□□ 1.5
CTSB-232ENST00000534510 KIF14Q15058 1648 aa24.42■■□□□ 1.5
CTSB-232ENST00000534510 GPATCH8Q9UKJ3 1502 aaKnown RBP24.41■■□□□ 1.5
CTSB-232ENST00000534510 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
CTSB-232ENST00000534510 PLB1Q6P1J6 1458 aa24.4■■□□□ 1.5
CTSB-232ENST00000534510 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
CTSB-232ENST00000534510 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
CTSB-232ENST00000534510 SPATA31E1Q6ZUB1 1445 aa24.39■■□□□ 1.49
CTSB-232ENST00000534510 CARMIL2Q6F5E8 1435 aa24.38■■□□□ 1.49
CTSB-232ENST00000534510 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
CTSB-232ENST00000534510 MBD5Q9P267 1494 aa24.35■■□□□ 1.49
CTSB-232ENST00000534510 NUP160Q12769 1436 aa24.35■■□□□ 1.49
CTSB-232ENST00000534510 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
CTSB-232ENST00000534510 PRKRIP1Q9H875 184 aaPredicted RBP24.34■■□□□ 1.49
CTSB-232ENST00000534510 ANKRD30AQ9BXX3 1397 aa24.32■■□□□ 1.48
CTSB-232ENST00000534510 KIF7Q2M1P5 1343 aa24.31■■□□□ 1.48
CTSB-232ENST00000534510 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
CTSB-232ENST00000534510 SHANK2Q9UPX8 1470 aa24.29■■□□□ 1.48
CTSB-232ENST00000534510 ABCA8O94911 1581 aa24.29■■□□□ 1.48
CTSB-232ENST00000534510 CCDC184Q52MB2 194 aa24.27■■□□□ 1.48
CTSB-232ENST00000534510 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
CTSB-232ENST00000534510 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
CTSB-232ENST00000534510 ANKRD50Q9ULJ7 1429 aa24.24■■□□□ 1.47
CTSB-232ENST00000534510 JPH4Q96JJ6 628 aa24.24■■□□□ 1.47
CTSB-232ENST00000534510 ABCC10Q5T3U5 1492 aa24.24■■□□□ 1.47
CTSB-232ENST00000534510 FBLN2P98095 1184 aa24.23■■□□□ 1.47
CTSB-232ENST00000534510 ERICH6BQ5W0A0 696 aa24.23■■□□□ 1.47
CTSB-232ENST00000534510 ANP32EQ9BTT0 268 aa24.22■■□□□ 1.47
CTSB-232ENST00000534510 RBM19Q9Y4C8 960 aaKnown RBP24.22■■□□□ 1.47
CTSB-232ENST00000534510 PKD2Q13563 968 aa24.21■■□□□ 1.47
CTSB-232ENST00000534510 ZBED9Q6R2W3 1325 aa24.21■■□□□ 1.47
CTSB-232ENST00000534510 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
CTSB-232ENST00000534510 KDM5CP41229 1560 aa24.21■■□□□ 1.47
CTSB-232ENST00000534510 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.46
CTSB-232ENST00000534510 C9orf84Q5VXU9 1444 aa24.2■■□□□ 1.46
CTSB-232ENST00000534510 USP47Q96K76 1375 aa24.2■■□□□ 1.46
CTSB-232ENST00000534510 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
CTSB-232ENST00000534510 PLEKHD1A6NEE1 506 aa24.18■■□□□ 1.46
CTSB-232ENST00000534510 ATP10BO94823 1461 aa24.18■■□□□ 1.46
CTSB-232ENST00000534510 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
CTSB-232ENST00000534510 ARHGEF12Q9NZN5 1544 aa24.17■■□□□ 1.46
CTSB-232ENST00000534510 ARID4BQ4LE39 1312 aaPredicted RBP24.16■■□□□ 1.46
CTSB-232ENST00000534510 RALGAPBQ86X10 1494 aa24.16■■□□□ 1.46
CTSB-232ENST00000534510 ARHGEF5Q12774 1597 aa24.15■■□□□ 1.46
CTSB-232ENST00000534510 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.46
CTSB-232ENST00000534510 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.45
CTSB-232ENST00000534510 NUP155O75694 1391 aa24.12■■□□□ 1.45
CTSB-232ENST00000534510 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
CTSB-232ENST00000534510 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
CTSB-232ENST00000534510 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
CTSB-232ENST00000534510 PTPRGP23470 1445 aa24.08■■□□□ 1.45
CTSB-232ENST00000534510 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
CTSB-232ENST00000534510 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
CTSB-232ENST00000534510 KIF15Q9NS87 1388 aa24.06■■□□□ 1.44
CTSB-232ENST00000534510 PREX2Q70Z35 1606 aa24.05■■□□□ 1.44
CTSB-232ENST00000534510 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
CTSB-232ENST00000534510 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
CTSB-232ENST00000534510 CDC42BPBQ9Y5S2 1711 aa24.02■■□□□ 1.44
CTSB-232ENST00000534510 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
CTSB-232ENST00000534510 POLR3GLQ9BT43 218 aa24■■□□□ 1.43
CTSB-232ENST00000534510 CHD1O14646 1710 aa24■■□□□ 1.43
CTSB-232ENST00000534510 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
CTSB-232ENST00000534510 HNRNPMP52272 730 aaKnown RBP eCLIP23.97■■□□□ 1.43
CTSB-232ENST00000534510 FAM135AQ9P2D6 1515 aa23.97■■□□□ 1.43
CTSB-232ENST00000534510 E9PCH4 1651 aa23.96■■□□□ 1.43
CTSB-232ENST00000534510 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.42
CTSB-232ENST00000534510 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
CTSB-232ENST00000534510 RSPH4AQ5TD94 716 aa23.94■■□□□ 1.42
CTSB-232ENST00000534510 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
CTSB-232ENST00000534510 UNC13BO14795 1591 aa23.92■■□□□ 1.42
CTSB-232ENST00000534510 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms